FFCP PHASE1:Hg19::chr12:56325827..56325884,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1606 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2849 | |||
|TSSclassifier=strong | |||
|UniProt=P23743,C9JM35,G3V327,G3V4I3 | |||
|association_with_transcript=0bp_to_ENST00000402956,ENST00000432422,ENST00000547535,ENST00000549097,ENST00000549323,ENST00000551156,ENST00000551615,ENST00000553783,ENST00000557080,uc001sin.2,uc009zof.2_5end | |||
|cluster_id=chr12:56325827..56325884,+ | |||
|description=CAGE_peak_1_at_DGKA_5end | |||
|id=chr12:56325827..56325884,+ | |||
|ontology_enrichment_celltype=CL:0002371!1.89e-09!591;CL:0000003!1.19e-07!722;CL:0002057!4.86e-07!42;CL:0000144!7.12e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.21e-07;33!CL:0002057;3.21e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.86e-07,42;CL:0002057,4.86e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.90e-07!216;UBERON:0000165!5.14e-07!28;UBERON:0000930!5.14e-07!28;UBERON:0000166!6.84e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000161;3.28e-07;19!UBERON:0000166;3.28e-07;19!UBERON:0000165;6.35e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.70e-08,99;UBERON:0000165,2.30e-07,29;UBERON:0000930,2.30e-07,29;UBERON:0000166,2.96e-07,22 | |||
|phase1_expression=20.7113352368435,11.7755288140041,18.7469357447642,16.0117277365009,16.9845215882369,21.8084631025092,0,9.47579810140246,19.3277364867881,19.6587149201207,15.3516256953934,53.0812534276319,51.17079377632,51.4868028313794,26.8431874339612,14.7911532219391,18.0808358407193,18.9880623500717,16.5897151588772,11.4502584011413,13.4640456221207,9.09018692286455,7.15589967827642,7.93871665422728,7.53255837568817,4.58480434487708,3.11982239909794,3.06972047123349,16.9146639045029,21.8782756915411,21.2098088943024,35.8574277546782,53.3134476237503,82.8248982773604,1.47187681102573,2.55904618477359,8.51441274071057,18.8358438900838,36.4990894395658,22.7861414251644,13.2110129801555,13.9274276388161,6.95454032612304,49.7261976626111,47.9902448484788,48.7593962987511,33.0049232406072,28.370584273506,26.6347478969789,18.7000055009398,22.0298207615027,23.6482229888585,23.7874519708267,24.5284179761854,17.6054432572644,40.47210300166,40.1172040585033,34.607416604543,24.1806274973013,31.4510446534572,26.8521592835597,20.7806319117631,30.318475958488,28.1308335351578,15.6712988859435,13.0498601678962,10.5879782329248,28.8935965045255,28.6815605131111,30.4064382587163,19.3727840842678,19.8869923433285,15.1901945971625,19.0129757680748,19.346991296819,15.3050811221114,33.361603450509,35.1413929249125,24.108838004562,7.41033133727246,9.94583385995451,6.94123784305609,36.9592113368778,34.4067325095143,36.4698794084057,28.590924911956,30.0296990277009,29.8871268776331,33.0522436392431,30.5297201451317,35.2912040847858,28.774622279176,40.138688953149,13.2171328579026,11.2101712596307,10.271979306228,32.6538218388963,25.9387103414449,28.9898113589308,21.2326849146161,46.6068841286034,48.7651239906775,74.0341567950063,19.4968299549054,54.7966987903197,58.7064820646596,72.3046316252592,10.5034882175054,12.3556380181884,18.0881695064044,17.6864011382943,29.5599147449754,52.7900164856935,64.2097987415311,40.7688542839409,12.9172650675225,35.2562854113768,41.2352934579156,53.3871550161151,43.9620271767253,37.7628403236723,31.3649174667963,36.1380285786655,39.8038360690241,43.7257542933211,40.9624646036149,26.2760959014735,27.0153035921141,21.9300960542476,30.1234760076222,31.694892620815,8.04841031644363,12.530531060666,26.3850581240733,27.072247174338,16.2228101236123,43.7407270878105,26.2782829963423,12.2895262313288,13.9689520401415,9.74966121193699,8.8410875960956,93.6238890911833,67.1119841439817,5.19275829847493,9.22887607686116,9.1740992758017,10.0166062208244,13.1558829479429,8.91498003190956,13.1183188862025,12.0432843314857,19.0927275884177,11.8714667804042,15.9409785759764,12.6554299292431,19.854521820997,16.0218390684984,11.7402866686614,13.0541038978221,17.7244899528025,12.1643536914962,12.4471649349566,17.2801647762558,19.4434067491622,18.1278448416682,13.9208211028225,12.2746513726821,12.2653309972707,23.7316414892032,11.3585081236853,83.0216629847199,120.211881885981,73.2638007599458,29.3213451500238,29.5049092178471,56.1414926648048,47.9017156650519,18.7974242565129,12.3349072031308,9.60740961567345,11.1000396787722,12.7596524513904,13.2016458628294,9.64425228369407,16.3466021856526,5.18558332031999,28.3528932518894,13.7350433805341,10.2684927878001,18.0832903467679,10.4516703792951,11.1692331614011,9.2697532423484,47.3637677311352,18.4251475967652,44.0167827808761,21.384051431077,13.8469480395992,37.3166158394591,22.2771623963034,27.1021143466047,16.6407631429712,32.1394373961652,10.9744405220209,13.7919508109559,11.8688066536211,11.3432183160021,44.8474089222155,17.5117058831225,16.5306882904458,31.8096561849466,17.8280875582499,62.6066512310879,22.8923733287855,52.9957683237576,22.2156371767533,42.4088740730112,22.0919756741518,33.9456719319505,44.7312086570934,21.8632053153979,27.129694769678,73.4391242020528,104.734510306881,67.6858845118049,2.19552671033272,1.98794652482228,2.67246068599892,4.97573064073778,2.52320850875628,1.45990943630332,15.6449532329816,17.3675053312079,31.7710319110705,21.360924689471,23.1001434134267,3.90412440131485,3.37169380156203,3.37415441836875,4.52205288202815,5.66486554640256,4.27087114399974,4.58426447744559,4.51309369788296,2.69323009862473,11.8104872739944,14.0241773803446,12.7587943512734,17.641045366265,0,0,1.77236972004421,0.441463099414651,6.14942192715568,19.3871625637334,104.59202199442,148.370314300058,49.560783398934,99.9029323260534,38.7711883319286,32.2379783436669,15.8764476227801,13.1001357621837,20.6639301855046,14.4366447761074,9.72269576410883,10.6542325251375,4.74122638775565,6.86788929675898,5.17055712783534,3.04205544681009,6.53977114070404,67.4883604704794,127.330453174736,89.3183112627035,123.053410193714,95.3279318325795,117.315099824555,14.2872338989824,3.52193736052904,4.97587477297853,14.1237554348622,5.6809095041871,0.952468414382536,4.96584953225761,3.51652341630141,5.13217338068116,3.70178973731965,0.600686115687835,1.42913216315289,16.3711383144227,10.899001720832,8.43390286940925,14.2198887333556,14.3062578340753,8.45302752556,17.0200394614317,9.36066932202295,15.6896498299907,15.6034045225606,17.3174416360465,16.5854472643451,11.3950537132203,15.6415663988346,8.79487697593085,9.24019066730619,2.37585561880029,25.6223470500648,32.2467379682109,22.6938689983269,4.86495122564762,3.51579964002488,4.21667878966063,29.2342323699731,21.8237678084816,7.13184525203592,17.5185381067771,16.2326294814803,14.5039380224315,3.25046917581229,28.1753987088756,18.328343863059,23.1017465303547,3.81141936333695,3.90419561572865,3.09315525111078,4.85797169469611,0.637938751653163,68.1596391791936,62.8239064328452,79.1533630662828,30.0594154711893,18.5063092792081,21.7012018959788,20.7970861530807,30.5113570843147,34.8522337224996,37.6023942126609,22.5709574795789,29.562975527278,13.4514992680256,12.6202863721733,16.9619635058367,25.0224809668079,17.8179053291094,10.2943027143257,42.5942133813148,18.9828496720383,27.0020721242714,53.6535801459879,49.9306318531491,52.3135207460347,34.9832009024475,94.0721896255823,19.9268667047482,18.1957591943095,31.7258494421356,29.4362675692802,31.1677939534481,6.9394362211195,8.70052454034323,13.1403449622095,14.5391240171414,8.36714724911707,2.05461064305758,55.9413052146165,33.0570750279868,10.6777436793084,4.91646153618136,13.1124414959424,29.7791744518892,50.2910151291828,20.3930939985982,35.0734139167826,39.4763092059355,18.1973414513435,15.3084334748864,7.55705706357488,15.4227252690289,19.2371970656136,21.0709705019038,37.2119358645756,27.4255082946479,21.4919764533291,5.04297716285649,4.70583811844821,12.5660561307031,9.18441007959176,9.43597344526479,10.8193062230108,3.47963966309705,6.02319349420292,140.695056809062,74.7569282941999,19.2820715812991,17.5940707291662,9.08886840976402,8.59620578466325,6.34048233428841,25.0289170543078,20.302337147992,7.92607634969738,11.3070685271356,78.8409046271866,63.6149122978501,246.420147827042,39.7550078762311,12.0859842817294,46.2774149841041,19.5170435644968,17.249880489861,16.5014869398277,29.5777217305525,31.1344688094586,12.1656153730693,9.30395923399168,24.3612157033419,12.9628531868201,26.8692680876901,19.2572544615264,16.5465688921487,15.6989728039846,20.6853326220812,13.1777774273306,10.3674914064204,20.6226131204782,28.5318578111415,8.42516912477962,10.727942259971,10.2359665645139,26.4125366891889,12.4214919381267,9.75697480480618,16.9512174930364,20.4005177112066,17.2494133562717,19.7302898364193,23.7297969049342,12.462000288886,24.5521556124872,17.350115893586,16.6200405494022,12.4767876417525,17.3900802593224,27.106999912575,5.67617702512956,21.5329788003617,15.8061548620753,17.4557659932229,18.8964748932291,74.3796931368208,55.6350888694704,68.6013204626332,9.41438007767792,91.697644378972,94.3440263738703,103.762655927582,139.901550726038,32.4766469908588,32.8793999071221,31.3305952945789,30.0172037076814,33.7317063930679,31.1267189372504,36.7221377321918,30.1387566991823,4.80708320073629,0,18.1329759825963,9.84756828166309,3.46246111143468,13.0189573327598,5.26106700005114,1.79621434289535,9.1922577663536,7.83192256078367,6.49243880549111,12.3550758369922,9.58585651939407,3.13359791546046,2.50634477090067,6.09450400085772,9.79587258132567,11.7043830170808,6.38769356535489,11.679181721696,2.15068535015921,0.894704431569664,1.83534055883099,6.05703095746325,2.50565556505718,0,2.70455678475983,1.99843180798692,1.4098700508785,10.8541513436767,7.03239260505091,2.91265252198832,7.68959351514601,2.84136146806413,33.4242278632766,24.3511038282764,40.2380519749994,23.8595435463912,19.8343877138823,19.3677146739856,0.329607748453519,5.91151142758382,25.3044945078859,25.6944041443967,3.27512572210559,7.56788250515945,8.00051235496952,32.9701962921516,9.16657181702734,0.537063524026827,4.60415133204185,23.0825569190425,16.7638164642858,21.116028127481,9.69332746095218,7.79252024559551,5.98841394003583,8.07326059364223,1.22443999994674,2.17499872630438,32.2035458647964,9.66163871112512,13.2377101790044,0.689486746482929,1.16641845353302,6.42412481253181,9.74315524395223,9.165329335531,10.6807215421958,16.0339926900276,13.8907380908167,8.55603048900493,4.03072315020264,76.6830593532318,16.4673553198126,0,0,0.0897576444097721,6.08425282763245,30.6241113342643,24.639752625101,33.581190889174,2.04386596391473,5.18034846103582,3.32423363800313,2.70714792740617,2.35275041181287,3.35643173951685,1.3282761290693,3.49660473756833,3.58696709697646,3.4278889713421,4.94735750018793,2.59666367690509,10.9478812418636,26.1834390929884,16.4978139132079,10.3782395038218,5.06612149680662,5.42994137428368,6.7401132980677,6.42062117839031,1.63985112007737,9.48764903921463,30.9150097912702,2.18502341580683,5.91876604274086,13.308978765353,7.34574627913176,17.5658691367197,3.30711522711884,1.45163467956146,25.256847162873,14.8946380143974,16.3245117571757,19.1155887636734,3.13070500632772,24.6840917963387,20.1329296468752,44.6845332209562,20.7200911661358,7.33852006616527,1.20390222730132,0.774050650312681,0.730893170861856,0.739039113478883,40.5414088921593,1.059073520298,9.94315259434343,14.9375697864958,6.16015296279268,20.7659410735282,13.6885967914362,10.4206466326994,14.9417096317547,13.9866726707491,9.79814836647921,3.43609788497747,10.9820798631657,5.33002752556154,14.4132941255902,30.8759185348002,9.6491986312266,15.5858241005376,5.09991088181609,6.93481415763645,3.00210144354895,5.06549901900374,22.994385852055,12.4631978011788,5.5206344398656,14.5226848661572,10.7705399285491,6.46085722119133,11.9807400299395,6.43839072204856,5.35611497860494,11.8914746301505,25.5812917315107,1.16495949527454,1.26053091691558,1.56590130924216,1.61768505250044,2.06697711180972,1.27009998098677,13.5189047267582,14.0289508294923,3.85807556316046,4.26372253451425,3.73896304226267,64.7924807668321,69.6421759102155,27.3373004961111,56.3530275166767,5.20117668174708,10.4384630388646,10.0320319693436,2.86859742932552,24.565145256889,5.71756261098694,1.98627591109629,0,14.1179896455965,14.6917653504216,20.5750036868928,7.18381149374925,5.25392132795769,15.6756980042588,8.49840686400943,1.31897010310274,2.65013777824443,4.65418642901582,5.02483886622222,2.9084762440336,16.2107455132835,13.6687888086649,17.7640864762623,5.79934677486074,9.92332043623902,4.34745590175477,12.7882228299941,33.1937454040495,0.544017803369474,0.7520696820681,1.53172788381731,1.31149052283922,0.785270481251171,19.4934999592737,17.4497558809807,15.6488663383125,2.29363678276028,7.98689171065336,8.38301439708677,4.98055085770431,9.4985110051201,2.88133323329131,0.856396000634902,16.7038731985702,0,2.02889440055155,7.4627401443437,15.8925050696113,9.43169964554443,18.7508975222338,15.3456420069071,21.3554693183169,30.2068890283939,12.7033975961121,13.9893480524502,13.1591083490774,16.4075670178613,13.0442902527445,9.78156628320434,15.3441296901117,17.5455531608277,20.3480574106576,13.5231848097497,23.2291179422965,13.4267341957538,16.7300766466355,15.2522991000334,22.7376542340462,20.3028903236294,18.4012771745051,17.8565766695052,15.1537269944664,32.8080735394493,6.35645440344101,6.21880614987285,1.82696004375648,19.0432977430309,17.5957080486114,6.85262772618109,7.87990900758545,10.808050650634,14.253463222616,23.8530347026939,31.8308163147009,3.37884881306145,0,3.79973375904318,8.20421881678932,15.4849448489938,34.6851349734111,32.1532913558339,34.0216020052156,8.19024622116032,3.68659363130579,16.2710334986143,7.59952104248734,6.18812032226017,9.12739392202323,7.9452233499357,0.736423801007363,37.0680695456528,49.7661808026378,1.79052119825112,3.66604358748718,7.54876520908303,2.51182167841632,2.54598794931038,4.46407332213534,6.44465974146811,2.79322458986622,20.0342740911654,4.7317047000752,4.00285374142735,33.8568905943057,24.1933927109028,14.5800340968963,8.5017945795351,14.3670473151436,6.15349092722265,3.78107544332577,15.6295390569132,9.85001438354292,2.85538840518309,35.6276218158723,8.61178980438505,89.146298881536,18.4841065840541,25.171218300833,4.1421595563606,8.55339755099981,10.3790253121975,7.46308754203024,7.81514011233093,0,18.0149109261106,30.1626415882772,15.3310317083756,7.81078098613847,15.70819653409,14.5222205344047,4.37579847214576,25.7681150422876,15.8787577084574,8.44181972926179,16.098065882589,3.74991285114801,4.70797211106354,10.9253808762594,6.60220354918763,22.0868901704971,5.30076342756585,5.48761630199739,7.27276142852099,14.9961923723296,8.39176270276174,9.0097435532576,14.8351945487471,11.1552068840361,1.96190514319652,4.56579360254748,0.431855182437243,2.38875843943525,10.2211458172619,0,0.116241425368125,2.78173235684127,18.4393613887958,80.6070878594213,102.772523210558,92.6287946830883,37.8600075761844,17.3948041073931,19.5990830946063,12.7016115057279,12.6008777699228,11.1674298839155,6.68877257284203,9.50771170281235,6.28161495137555,18.6534425222872,1.94228651156368,2.15591894398119,1.1598144313382,15.0570407848333,3.9769708788558,4.97376937903421,0.594600453887843,34.2226628578049,3.29821550236287,1.66059127923341,47.3077589201701,4.37119121007915,7.99539403814589,8.58019126138669,4.94920748913415,8.04864715171276,8.91139200981258,4.6492130034174,22.4303791387918,16.8231213183938,26.9433971729553,6.69605744697024,25.7117671592147,75.8723974188737,3.85158560108008,11.6853822119443,28.4412155710815,4.73020624399789,7.73080654746605,17.7457789398287,3.49080552272302,25.3932883447392,29.7596014533401,24.9574839460966,27.2554734137987,3.91115916988745,0.218531143927391,2.66066852124018,9.99490531471421,5.87878291584233,24.2602534771991,0.50141507858475,5.22873017705852,2.67964130156179,4.97501663675268,5.58538177654234,31.1321613575432,7.61806180683969,11.3030592213011,23.2159431466509,4.70953822838576,3.81882949668989,3.84022659020617,17.6350565796539,13.347098742326,46.2708604210216,25.6048273251855,19.2943006796688,7.08208436915478,6.72382279029607,21.2379510515634,13.0246543054551,18.7712753922763,16.3803535205041,9.35861210126198,10.6521083869682,20.3286531526937,8.97591778449052 | |||
|short_description=p1@DGKA | |||
}} |
Latest revision as of 08:47, 19 September 2015
Short description: | p1@DGKA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DGKA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000402956, ENST00000432422, ENST00000547535, ENST00000549097, ENST00000549323, ENST00000551156, ENST00000551615, ENST00000553783, ENST00000557080, uc001sin.2, uc009zof.2_5end |
EntrezGene: | DGKA |
HGNC: | 2849 |
UniProt: | P23743C9JM35G3V327G3V4I3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.86e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.86e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
surface structure | 7.70e-08 | 99 |
mouth | 2.30e-07 | 29 |
stomodeum | 2.30e-07 | 29 |
oral opening | 2.96e-07 | 22 |