FFCP PHASE1:Hg19::chr12:80084303..80084332,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5074 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8614 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-443bp_to_ENST00000551712_5end | |||
|cluster_id=chr12:80084303..80084332,- | |||
|coexpression_cluster_id=C1688 | |||
|description=CAGE_peak_1_at_PAWR_5end | |||
|id=chr12:80084303..80084332,- | |||
|ontology_enrichment_celltype=CL:0000066!9.23e-42!254;CL:0000076!1.04e-14!62;CL:0002321!1.74e-14!248;CL:0000220!7.57e-14!246;CL:0000077!1.63e-09!19;CL:0000223!8.08e-09!59;CL:0000213!9.40e-09!57;CL:0000215!9.40e-09!57;CL:0002076!2.35e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.21e-09;19!CL:0000076;4.46e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.47e-42,253;CL:0000076,4.14e-14,63;CL:0002321,6.27e-14,250;CL:0000077,1.31e-09,19;CL:0000223,2.04e-09,58;CL:0000213,6.88e-09,58;CL:0000215,6.88e-09,58;CL:0002076,5.69e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!8.58e-16!106;DOID:0050687!2.23e-15!143;DOID:162!9.24e-09!235;DOID:14566!4.20e-08!239;DOID:7!7.26e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.85e-16,106;DOID:0050687,2.14e-15,143;DOID:162,3.12e-09,235;DOID:14566,1.51e-08,239;DOID:7,6.26e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0000466!4.75e-15!126;UBERON:0009569!2.33e-14!113;UBERON:0004119!8.39e-14!169;UBERON:0000925!8.39e-14!169;UBERON:0006595!8.39e-14!169;UBERON:0001007!7.11e-12!155;UBERON:0001555!7.11e-12!155;UBERON:0007026!7.11e-12!155;UBERON:0000464!1.62e-11!104;UBERON:0005177!1.13e-10!107;UBERON:0005911!4.86e-10!82;UBERON:0002417!7.43e-10!61;UBERON:0000916!7.43e-10!61;UBERON:0001048!9.82e-10!168;UBERON:0002100!1.39e-09!216;UBERON:0003886!1.58e-09!63;UBERON:0000077!7.09e-09!130;UBERON:0002553!7.19e-09!70;UBERON:0004921!3.39e-08!129;UBERON:0004185!3.39e-08!129;UBERON:0005172!4.96e-08!55;UBERON:0005173!4.96e-08!55;UBERON:0000475!1.55e-07!365;UBERON:0003929!5.95e-07!54;UBERON:0003104!9.51e-07!238;UBERON:0009142!9.51e-07!238 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,1.04e-14,112;UBERON:0004119,2.53e-12,160;UBERON:0000925,2.53e-12,160;UBERON:0006595,2.53e-12,160;UBERON:0005177,3.42e-12,101;UBERON:0001007,7.78e-11,145;UBERON:0001555,7.78e-11,145;UBERON:0007026,7.78e-11,145;UBERON:0002417,2.05e-10,60;UBERON:0000916,2.05e-10,60;UBERON:0005911,3.66e-10,82;UBERON:0002100,2.50e-09,199;UBERON:0005172,1.57e-08,54;UBERON:0005173,1.57e-08,54;UBERON:0001048,1.10e-07,160;UBERON:0003886,1.53e-07,54;UBERON:0003929,4.04e-07,54;UBERON:0004921,4.25e-07,118;UBERON:0002553,6.90e-07,61 | |||
|phase1_expression=10.7190243769628,10.4909256706582,12.1220787522535,10.007329835313,14.7497161161005,11.3404008133048,2.53299878168311,1.26343974685366,0,13.515366507583,16.7472280313383,7.8638893966862,4.48403862988371,0.618831764800233,3.97676850873499,2.6893005858071,2.41077811209591,0.730310090387373,2.92759679274304,6.1560529038394,9.9960338709684,10.657460530255,8.01460763966959,13.6874425072884,31.0090319799163,8.9403684725103,8.29215953444452,9.28787219501415,0.393364276848904,0,0.77408061658038,3.67768489791571,4.819294700452,9.24385025416969,7.82418725861046,9.2410001116824,1.46800219667424,0.553995408531877,0,0,0,0,0,0,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0.641858054152187,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,5.46138611262132,9.7846017924991,13.2286368995617,6.80673177961221,9.19603903927173,7.93253847341835,7.63243003628291,13.6611112586268,5.28513470433845,9.55683070313072,1.32171328579026,1.12101712596307,1.58030450865046,0.196709770113833,0,0,0,0.32592226663359,0.946895611469467,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0.829050053357545,0,0.14828656316206,0,0,0,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,21.225185266026,3.2529523714611,10.5280961233537,11.0083354410226,0,2.91980922181582,10.4933647052115,13.5254932452164,22.7492094945196,6.48346423713678,10.5645633604837,4.44941331341315,0,0.174129737299267,0,0,0,0,8.14925870203491,2.58070378531837,10.4142150482278,7.91431118693613,5.03399323451887,10.4544855937226,8.98678356108286,22.4822580477316,17.7883131343355,32.8026200509377,6.8480983908555,10.6438094800592,27.8230745604913,6.98559852657151,10.5318453224629,8.92997282840798,10.7774098860562,14.9773269042819,6.13266549863533,7.59412527654503,7.69447324507711,0,0,10.0301631992783,10.4364109856017,11.7766375848059,8.87141511448566,14.6286676581895,6.02936249737207,19.0630384048384,8.5399196583764,9.62003438826924,3.7345324247972,4.58016285036939,3.59616186849609,10.8977347904351,4.03323147135999,7.26396438684769,0,1.71141546463335,0.448346041655403,0.587172493218824,0.323745888736263,0.140450806702248,2.44985005505872,3.56219520204127,4.23635702820638,7.12801714369232,13.3524141810421,2.73048408581408,3.59309070908119,1.5150250255866,3.503318556415,5.54128230968366,11.8523957637826,15.63087758575,8.86404547548921,7.48652408856139,8.07253360599879,11.1049842185655,11.0204588602972,6.90209520994125,8.65641245602887,17.5195567231028,10.9808945235638,6.91982962189192,7.98983442321829,8.83518209854401,10.6777882425067,4.52608959092673,8.87523981291536,4.63459651847145,6.78242369241951,11.4023903366345,14.4555443913142,19.2159078910633,26.1023731117334,13.5180363687915,19.055806630601,14.4088866471365,17.662459561294,8.75945661781992,0,3.21620469096443,5.52539685409922,2.78620756819187,0.721879481669586,8.75470320294845,6.40621822296786,5.54325368732009,8.49263590039433,7.40790109914181,6.64357733511071,6.0674088672074,3.33576490713088,3.46272441251751,1.4763109092493,9.81692416624121,6.9967581926338,2.94017422771084,3.80265104465493,9.82827216677626,4.13552934676983,0,10.6999941532509,6.34800898104545,11.8530308241316,4.49607013030478,10.0528972411631,13.6105014383038,5.53874119027552,1.03993478527958,8.6598805215164,8.69478037313076,36.5141039073405,18.9120046567007,14.3525508898749,17.503382005583,8.69224837755203,11.1603201072333,0,0,0,9.3733833986777,11.2548025893236,10.633132293179,18.2699386313811,16.2755005567819,8.05103626246943,0,0,0,0,0.12624243342638,0.888970520090367,0.763976851116555,0,3.4214489204541,2.46785982487976,3.60411669412701,0.857479297891735,7.62491373548453,13.950722202665,7.84719658284165,8.91974838728667,0,2.535908257668,16.488163228262,8.32059495290929,1.28603687131071,8.5109479213967,2.93064396917709,14.8697113404473,1.08524321078289,1.64648067356154,0.325736184293735,12.0833262572466,2.37585561880029,12.0575750823834,10.4584015032035,14.4960837213983,0,0,0,17.2529895953939,13.7834323000937,1.42636905040718,3.76431397335706,6.57524232161227,1.96967059563885,0,0,0.215627574859517,0.128343036279748,1.52456774533478,5.20559415430487,3.09315525111078,1.00509759200609,2.55175500661265,0,0,0,2.94459580125936,1.50051156317903,3.25518028439683,31.6115709526827,22.4820525884424,25.2323864054295,31.042474973069,6.01892199455438,2.27407504055985,4.1389228517002,11.9560607736379,12.3527342922941,0.434418072340414,5.09083009403126,3.0882908142977,1.03384013061444,0.215714200818617,0,5.15316871458641,6.65741758041988,4.5358543999452,14.8864684691266,31.7666284706289,12.3490441550552,11.6606625822688,22.0034117098682,17.3722234835096,4.45254199334973,1.23367755042124,0.532685175939381,0.98552587216571,0,1.39452454151951,14.9865717493612,11.0278558666807,13.6279863625127,2.29628896329214,4.18809686415449,2.88473712910733,22.1087810324632,25.0299845589348,20.3930939985982,13.1525302187935,20.4770160052179,9.098670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| |||
|short_description=p1@PAWR | |||
}} |
Latest revision as of 00:34, 25 September 2015
Short description: | p1@PAWR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PAWR_5end |
Coexpression cluster: | C1688_pancreatic_large_testicular_oral_extraskeletal_mesothelioma_small |
Association with transcript: | -443bp_to_ENST00000551712_5end |
EntrezGene: | PAWR |
HGNC: | 8614 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.47e-42 | 253 |
squamous epithelial cell | 4.14e-14 | 63 |
embryonic cell | 6.27e-14 | 250 |
mesothelial cell | 1.31e-09 | 19 |
endodermal cell | 2.04e-09 | 58 |
lining cell | 6.88e-09 | 58 |
barrier cell | 6.88e-09 | 58 |
endo-epithelial cell | 5.69e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
subdivision of trunk | 1.04e-14 | 112 |
endoderm-derived structure | 2.53e-12 | 160 |
endoderm | 2.53e-12 | 160 |
presumptive endoderm | 2.53e-12 | 160 |
trunk region element | 3.42e-12 | 101 |
digestive system | 7.78e-11 | 145 |
digestive tract | 7.78e-11 | 145 |
primitive gut | 7.78e-11 | 145 |
abdominal segment of trunk | 2.05e-10 | 60 |
abdomen | 2.05e-10 | 60 |
endo-epithelium | 3.66e-10 | 82 |
trunk | 2.50e-09 | 199 |
abdomen element | 1.57e-08 | 54 |
abdominal segment element | 1.57e-08 | 54 |
primordium | 1.10e-07 | 160 |
body cavity precursor | 1.53e-07 | 54 |
gut epithelium | 4.04e-07 | 54 |
subdivision of digestive tract | 4.25e-07 | 118 |
anatomical cavity | 6.90e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.85e-16 | 106 |
cell type cancer | 2.14e-15 | 143 |
cancer | 3.12e-09 | 235 |
disease of cellular proliferation | 1.51e-08 | 239 |
disease of anatomical entity | 6.26e-07 | 39 |