FFCP PHASE1:Hg19::chr13:44272246..44272260,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:44272246..44272260,- | |||
|coexpression_cluster_id=C730 | |||
|description=CAGE_peak_at_chr13:44272246..44272260,- | |||
|id=chr13:44272246..44272260,- | |||
|ontology_enrichment_celltype=CL:0000453!1.27e-22!5;CL:0000990!5.75e-19!8;CL:0000451!1.73e-15!10;CL:0000080!3.64e-11!6 | |||
|ontology_enrichment_celltype_v019=CL:0000453;1.94e-51;5!CL:0000990;5.12e-29;8!CL:0000451;6.61e-24;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.94e-51,5;CL:0000990,5.12e-29,8;CL:0000451,6.61e-24,10;CL:0000988,5.65e-08,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!2.52e-08!1;DOID:0060061!2.52e-08!1;DOID:8691!2.52e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;4.20e-29;1!DOID:0060061;4.20e-29;1!DOID:8691;4.20e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,4.20e-29,1;DOID:0060061,4.20e-29,1;DOID:8691,4.20e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.36e-23!7;UBERON:0002106!5.67e-20!3;UBERON:0004854!5.67e-20!3;UBERON:0009034!5.67e-20!3;UBERON:0002095!5.67e-20!3;UBERON:0004782!5.67e-20!3;UBERON:0003281!5.67e-20!3;UBERON:0009664!5.67e-20!3;UBERON:0002296!5.67e-20!3;UBERON:0005602!5.67e-20!3;UBERON:0001179!5.67e-20!3;UBERON:0006293!5.67e-20!3;UBERON:0003408!5.40e-11!10;UBERON:0002372!2.90e-08!1;UBERON:0001961!2.90e-08!1;UBERON:0001744!2.90e-08!1;UBERON:0001735!2.90e-08!1;UBERON:0001736!4.11e-08!1;UBERON:0006298!4.11e-08!1;UBERON:0000945!7.96e-08!8;UBERON:0010039!7.96e-08!8;UBERON:0003112!9.94e-08!1;UBERON:0000032!9.94e-08!1;UBERON:0005253!9.94e-08!1;UBERON:0003128!9.94e-08!1;UBERON:0002241!9.94e-08!1;UBERON:0001703!9.94e-08!1;UBERON:0004761!9.94e-08!1;UBERON:0009617!9.94e-08!1;UBERON:0002581!1.14e-07!1;UBERON:0002370!1.35e-07!4;UBERON:0005058!1.35e-07!4;UBERON:0009113!1.35e-07!4;UBERON:0003295!1.35e-07!4;UBERON:0005562!1.35e-07!4;UBERON:0002331!7.17e-07!10;UBERON:0000358!7.17e-07!10;UBERON:0000307!7.17e-07!10;UBERON:0000091!7.17e-07!10;UBERON:0000087!7.17e-07!10;UBERON:0007806!7.17e-07!10;UBERON:0008780!7.17e-07!10;UBERON:0005728!7.17e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.28e-26;10!UBERON:0000178;1.10e-17;15!UBERON:0000179;1.10e-17;15!UBERON:0000463;1.10e-17;15!UBERON:0000478;2.43e-11;24!UBERON:0002390;9.22e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.28e-26,10;UBERON:0000358,4.28e-26,10;UBERON:0000307,4.28e-26,10;UBERON:0000091,4.28e-26,10;UBERON:0000087,4.28e-26,10;UBERON:0007010,4.28e-26,10;UBERON:0007806,4.28e-26,10;UBERON:0008780,4.28e-26,10;UBERON:0005728,4.28e-26,10;UBERON:0000178,1.10e-17,15;UBERON:0000179,1.10e-17,15;UBERON:0000463,1.10e-17,15;UBERON:0000478,2.43e-11,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.328402357799783,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.5764649672978,7.16670845889717,5.53436332378913,0,0,0,0,0,0,0,0,0,0,0.751617097072463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7065896485813,19.2654018454376,16.1929740313286,0,0,0,2.79982354196902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0.299823467774787,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.322944549180031,0.434523000071005,0,0,0,0,0,0.740872583160463,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:44272246..44272260,- | |||
}} |
Latest revision as of 16:08, 24 July 2015
Short description: | p@chr13:44272246..44272260, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:44272246..44272260, - |
Coexpression cluster: | C730_migratory_cord_Mast_B_b_CD14_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.94e-51 | 5 |
conventional dendritic cell | 5.12e-29 | 8 |
dendritic cell | 6.61e-24 | 10 |
hematopoietic cell | 5.65e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.28e-26 | 10 |
blastocyst | 4.28e-26 | 10 |
blastula | 4.28e-26 | 10 |
bilaminar disc | 4.28e-26 | 10 |
inner cell mass | 4.28e-26 | 10 |
cleaving embryo | 4.28e-26 | 10 |
connecting stalk | 4.28e-26 | 10 |
inner cell mass derived epiblast | 4.28e-26 | 10 |
extraembryonic mesoderm | 4.28e-26 | 10 |
blood | 1.10e-17 | 15 |
haemolymphatic fluid | 1.10e-17 | 15 |
organism substance | 1.10e-17 | 15 |
extraembryonic structure | 2.43e-11 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 4.20e-29 | 1 |
cutaneous T cell lymphoma | 4.20e-29 | 1 |
mycosis fungoides | 4.20e-29 | 1 |