FFCP PHASE1:Hg19::chr8:17650255..17650287,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:17650255..17650287,-
|short_description=p@chr8:17650255..17650287,-
|description=CAGE_peak_at_chr8:17650255..17650287,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:17650255..17650287,- | |||
|description=CAGE_peak_at_chr8:17650255..17650287,- | |||
|id=chr8:17650255..17650287,- | |||
|ontology_enrichment_celltype=CL:0000223!1.11e-12!59;CL:0002076!2.80e-10!43;CL:0000066!2.88e-09!254;CL:1000415!1.84e-08!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.33e-11;29 | |||
|ontology_enrichment_disease=DOID:305!1.06e-17!106;DOID:0050687!1.60e-11!143;DOID:3493!6.47e-09!2;DOID:299!7.64e-09!25;DOID:4929!9.57e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;2.88e-11;2!DOID:3493;2.88e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.73e-11,2;DOID:3493,3.02e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.87e-19!129;UBERON:0004185!1.87e-19!129;UBERON:0004119!2.39e-19!169;UBERON:0000925!2.39e-19!169;UBERON:0006595!2.39e-19!169;UBERON:0001007!5.87e-19!155;UBERON:0001555!5.87e-19!155;UBERON:0007026!5.87e-19!155;UBERON:0000077!9.63e-18!130;UBERON:0001041!9.73e-17!98;UBERON:0000065!8.31e-15!53;UBERON:0008947!2.26e-14!38;UBERON:0003258!2.26e-14!38;UBERON:0002294!1.43e-13!7;UBERON:0001173!1.43e-13!7;UBERON:0004912!1.43e-13!7;UBERON:0001004!5.94e-13!72;UBERON:0005911!2.85e-12!82;UBERON:0003127!1.87e-09!2;UBERON:0002394!2.20e-09!4;UBERON:0003928!2.20e-09!4;UBERON:0005153!1.45e-08!37;UBERON:0000466!1.92e-08!126;UBERON:0009497!2.30e-08!25;UBERON:0000015!2.30e-08!25;UBERON:0002423!2.30e-08!25;UBERON:0006235!2.30e-08!25;UBERON:0004161!2.30e-08!25;UBERON:0005178!6.79e-08!34;UBERON:0002224!6.79e-08!34;UBERON:0000072!7.53e-08!46;UBERON:0002048!7.56e-08!22;UBERON:0000117!7.56e-08!22;UBERON:0000171!7.56e-08!22;UBERON:0000170!7.56e-08!22;UBERON:0005597!7.56e-08!22;UBERON:0000118!7.56e-08!22;UBERON:0005181!1.27e-07!35;UBERON:0003929!1.38e-07!54;UBERON:0003104!2.18e-07!238;UBERON:0009142!2.18e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;4.06e-40;2!UBERON:0002171;2.30e-21;1!UBERON:0006518;2.30e-21;1!UBERON:0008949;2.30e-21;1!UBERON:0000101;2.30e-21;1!UBERON:0002167;2.30e-21;1!UBERON:0003126;3.07e-12;7!UBERON:0001005;3.07e-12;7!UBERON:0005178;3.55e-08;34!UBERON:0002224;3.55e-08;34!UBERON:0005181;6.56e-08;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.46e-40,2;UBERON:0002171,2.30e-21,1;UBERON:0006518,2.30e-21,1;UBERON:0008949,2.30e-21,1;UBERON:0000101,2.30e-21,1;UBERON:0002167,2.30e-21,1;UBERON:0003126,2.66e-12,7;UBERON:0001005,2.66e-12,7;UBERON:0005178,9.17e-10,34;UBERON:0002224,9.17e-10,34;UBERON:0005181,1.71e-09,35;UBERON:0008947,9.05e-09,38;UBERON:0003258,9.05e-09,38;UBERON:0001041,3.93e-08,87;UBERON:0004921,6.02e-08,118;UBERON:0001004,8.03e-07,74 | |||
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| ||
|short_description=p@chr8:17650255..17650287,- | |||
}} | }} |
Latest revision as of 16:28, 31 July 2015
Short description: | p@chr8:17650255..17650287, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:17650255..17650287, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.46e-40 | 2 |
lower lobe of right lung | 2.30e-21 | 1 |
right lung lobe | 2.30e-21 | 1 |
lower lobe of lung | 2.30e-21 | 1 |
lobe of lung | 2.30e-21 | 1 |
right lung | 2.30e-21 | 1 |
trachea | 2.66e-12 | 7 |
respiratory airway | 2.66e-12 | 7 |
thoracic cavity element | 9.17e-10 | 34 |
thoracic cavity | 9.17e-10 | 34 |
thoracic segment organ | 1.71e-09 | 35 |
respiratory primordium | 9.05e-09 | 38 |
endoderm of foregut | 9.05e-09 | 38 |
foregut | 3.93e-08 | 87 |
subdivision of digestive tract | 6.02e-08 | 118 |
respiratory system | 8.03e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.73e-11 | 2 |
signet ring cell adenocarcinoma | 3.02e-11 | 2 |