FFCP PHASE1:Hg19::chr16:73873222..73873224,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:73873222..73873224,- | |||
|description=CAGE_peak_at_chr16:73873222..73873224,- | |||
|id=chr16:73873222..73873224,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000138;2.45e-12;6!CL:0000153;1.12e-08;9!CL:0000447;1.12e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,2.45e-12,6;CL:0000138,2.45e-12,6;CL:0000153,1.12e-08,9;CL:0000447,1.12e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0003918;6.56e-08;10!UBERON:0007687;6.56e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;2.39e-66;1!DOID:4549;2.39e-66;1!DOID:5861;2.39e-66;1!DOID:6496;2.39e-66;1!DOID:201;2.45e-12;6!DOID:0060100;2.45e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.39e-66,1;DOID:4549,2.39e-66,1;DOID:5861,2.39e-66,1;DOID:6496,2.39e-66,1;DOID:201,2.45e-12,6;DOID:0060100,2.45e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.55e-24!57;UBERON:0005068!2.55e-24!57;UBERON:0006241!2.55e-24!57;UBERON:0007135!2.55e-24!57;UBERON:0005743!7.01e-22!86;UBERON:0001017!1.45e-21!82;UBERON:0000073!3.78e-19!94;UBERON:0001016!3.78e-19!94;UBERON:0002346!4.26e-19!90;UBERON:0007023!5.50e-19!115;UBERON:0002616!5.99e-19!59;UBERON:0002020!1.22e-18!34;UBERON:0003528!1.22e-18!34;UBERON:0003075!1.30e-18!86;UBERON:0007284!1.30e-18!86;UBERON:0001893!1.48e-18!34;UBERON:0002780!6.56e-17!41;UBERON:0001890!6.56e-17!41;UBERON:0006240!6.56e-17!41;UBERON:0002791!7.98e-17!33;UBERON:0003080!2.04e-16!42;UBERON:0002308!4.63e-16!9;UBERON:0000125!4.63e-16!9;UBERON:0000955!3.84e-15!69;UBERON:0006238!3.84e-15!69;UBERON:0001869!7.16e-15!32;UBERON:0002298!2.79e-13!8;UBERON:0002420!9.73e-12!9;UBERON:0007245!9.73e-12!9;UBERON:0010009!9.73e-12!9;UBERON:0010011!9.73e-12!9;UBERON:0000454!9.73e-12!9;UBERON:0003056!1.90e-11!61;UBERON:0009663!6.41e-11!7;UBERON:0006331!3.95e-10!3;UBERON:0000988!1.35e-09!3;UBERON:0003076!2.83e-09!15;UBERON:0003057!2.83e-09!15;UBERON:0002619!3.10e-09!22;UBERON:0000924!5.58e-09!173;UBERON:0006601!5.58e-09!173;UBERON:0004121!1.57e-08!169;UBERON:0000025!3.71e-08!194;UBERON:0001950!5.53e-08!20;UBERON:0000956!5.59e-08!25;UBERON:0000203!5.59e-08!25;UBERON:0000369!2.29e-07!4;UBERON:0002435!2.29e-07!4;UBERON:0000204!2.29e-07!4;UBERON:0010082!2.29e-07!4;UBERON:0002148!3.14e-07!2;UBERON:0009662!3.14e-07!2;UBERON:0000033!4.11e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;3.27e-23;3!UBERON:0004755;3.27e-23;3!UBERON:0001871;8.16e-11;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,3.27e-23,3;UBERON:0004755,3.27e-23,3;UBERON:0001871,8.16e-11,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0.104421949505455,0.269604531922708,0.802577647298789,0,0,0,0,0,3.62972148145992,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,2.11814704059601,0.451961481561065,0,0,0.126621591911757,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0.458320848023367,0,0,0,0,0.335917362433631,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,1.5256112259285,0,0,0,0,0,0,0,0,0,0.129282956361551,0.52893040697076,0,0,0,0.628817220398664,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0.3062454773532,0.321146125482298,0,0,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0.150962843566674,0.154348316215889,0.218559560503957,0,0,0,0.392616934229891,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr16:73873222..73873224,- | |||
}} |
Latest revision as of 12:17, 25 July 2015
Short description: | p@chr16:73873222..73873224, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:73873222..73873224, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 2.45e-12 | 6 |
chondrocyte | 2.45e-12 | 6 |
GAG secreting cell | 1.12e-08 | 9 |
carbohydrate secreting cell | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 3.27e-23 | 3 |
skeletal tissue | 3.27e-23 | 3 |
temporal lobe | 8.16e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.39e-66 | 1 |
extraosseous chondrosarcoma | 2.39e-66 | 1 |
myxoid chondrosarcoma | 2.39e-66 | 1 |
extraskeletal myxoid chondrosarcoma | 2.39e-66 | 1 |
connective tissue cancer | 2.45e-12 | 6 |
musculoskeletal system cancer | 2.45e-12 | 6 |