FFCP PHASE1:Hg19::chr17:7348805..7348866,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1140 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1961 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z5H1 | |||
|association_with_transcript=0bp_to_ENST00000536404,uc010vty.1_5end | |||
|cluster_id=chr17:7348805..7348866,+ | |||
|description=CAGE_peak_2_at_CHRNB1_5end | |||
|id=chr17:7348805..7348866,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.24e-16!254;CL:0000223!9.02e-10!59 | |||
|ontology_enrichment_celltype_v019=CL:0002159;4.82e-10;14!CL:0002322;1.28e-09;5!CL:1000507;3.83e-09;10!CL:1000494;3.83e-09;10!CL:0002166;1.66e-07;3!CL:0002621;2.89e-07;3!CL:0002076;6.10e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.83e-15,253;CL:0000223,9.76e-12,58;CL:0002159,2.52e-10,14;CL:0002322,7.53e-10,5;CL:1000507,4.10e-09,10;CL:1000494,4.10e-09,10;CL:0002076,8.31e-08,42;CL:0002166,1.21e-07,3;CL:0002621,3.82e-07,3;CL:0002077,5.18e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000223;1.48e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!5.44e-13!309;UBERON:0000119!8.14e-13!312;UBERON:0000481!2.10e-10!347;UBERON:0000475!5.34e-10!365;UBERON:0005177!8.74e-10!107;UBERON:0004121!5.89e-09!169;UBERON:0003075!6.27e-09!86;UBERON:0007284!6.27e-09!86;UBERON:0000153!8.36e-09!129;UBERON:0007811!8.36e-09!129;UBERON:0000033!1.15e-08!123;UBERON:0000924!2.84e-08!173;UBERON:0006601!2.84e-08!173;UBERON:0005743!3.10e-08!86;UBERON:0003056!3.40e-08!61;UBERON:0000073!4.43e-08!94;UBERON:0001016!4.43e-08!94;UBERON:0002346!6.33e-08!90;UBERON:0000025!7.38e-08!194;UBERON:0005911!8.49e-08!82;UBERON:0004111!9.35e-08!241;UBERON:0002780!1.34e-07!41;UBERON:0001890!1.34e-07!41;UBERON:0006240!1.34e-07!41;UBERON:0007023!1.74e-07!115;UBERON:0003080!3.14e-07!42;UBERON:0005172!4.61e-07!55;UBERON:0005173!4.61e-07!55;UBERON:0001049!4.78e-07!57;UBERON:0005068!4.78e-07!57;UBERON:0006241!4.78e-07!57;UBERON:0007135!4.78e-07!57;UBERON:0001893!6.47e-07!34;UBERON:0001017!8.42e-07!82;UBERON:0000466!9.63e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.83e-09;10!UBERON:0009773;3.83e-09;10!UBERON:0001231;3.83e-09;10!UBERON:0004810;3.83e-09;10!UBERON:0001949;2.89e-07;3!UBERON:0011159;4.07e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,4.10e-09,10;UBERON:0001949,3.82e-07,3;UBERON:0011159,4.19e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0.0821005894499457,0,0,0,0,0,0.6024118375565,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.458426764241994,1.82147644146271,0.370784442784429,0,0,0,0,0,0,0.596287222100115,0,0,0,0,0,0.417989933073621,0,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0,0,0,2.18047026071267,0,0.12663051166458,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0.161646056818812,0,0,0,2.31913023795956,2.18196896472668,3.15485054927904,1.70763188581434,1.85541675650079,2.32387885739037,1.34759371519982,2.01856680700503,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,0.982827216677626,1.18157981336281,0,0,0,1.53650399572076,1.1240175325762,1.40740561376283,1.11106134190236,0,0,0,2.08674728955138,0,0.577465791044295,0,0.570762456703795,0,0,0,0,0.148631162288728,2.81201501960331,3.35964256397719,4.53680311175637,0.447792613514241,0,5.75074018747817,0.492663237895943,0,0,0,0,0,0.381988425558278,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,1.80455823272956,1.38121483403844,0.114814448164607,0,0,2.70719767744447,2.0794141018192,2.35304930753057,0,1.16106791782163,0,0,0,0,0.812839312631559,2.50844886927427,2.03901018436031,1.66215201785745,0.895499018888713,0,0,1.28225062558195,1.31205858279882,0.976135183992909,0.721287081534056,0,0,1.72279661398852,4.55042172225565,0,2.80345083047154,0,0,0.689182862422653,0,0.145016693914229,1.02271952899321,2.58192903375538,0.991709492165869,1.15314040419064,1.14851441245126,1.2138933702666,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,1.53955380360819,3.35151137767894,1.08890984861323,0.470719003883896,0.43050537267123,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0.106824071127473,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39203086947621,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0.23874448473769,0.296964680832639,2.45728561679386,0.994147647766298,1.1253553312841,0,0,0,0,0,2.26739473068848,0.102268682502155,0,0,0.359473404589307,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0.508507300585533,2.36387681767936,0,0,0,0,1.4471572635049,0,0.331737779793674,0,0.658156191461918,0,0,0,0,4.38071418337314,3.14151755434202,2.60753692612819,0.31900115973192,0.732780747214898,0,0,0,0.166211681900156,0.902382642468723,0.392125068635479,1.1747511088309,0,0,0.421996129056054,0,0,0,0,0.176915129006678,0,0,0,0,1.21322039365219,0.802577647298789,1.87411556580271,0,0.391329237864179,0,0.394584402849391,0,0,0.063186579628488,0.901940516486955,1.03688191397247,0.664653872707185,0.330991955875499,0,1.19472429772959,1.42304773014896,0.138674673013139,0.520679215005393,0,0.174118413160805,0.17472666824203,0.859930162358083,0,0,0,0,0,0.225980740780532,0,0.397429223405979,0.633107959558787,2.15106521008283,0.961905843018405,0,0.999048047910651,0,0.687219576995494,0.343189995723929,0.576219191952599,1.98804056904692,1.17847017308398,0.135904206073614,0.313808538937,0,0,0.600420288709789,2.46429682005587,0,0,0.262887354279314,0.558564802544508,0.458320848023367,0,1.59743200399193,0.429226048136571,0.89268582976749,0.604651252380536,0,0,4.49064139151175,4.78011978610765,4.51603743823039,1.57483970423598,0,0,1.63444087333891,1.28602518772015,2.33817042215297,1.66176135211674,0,0,0.303747783290123,0,0.945668487590378,0.734364233889974,0.844802692155252,0,0.767660789277781,0.714695326373367,1.32418394073086,0,0,0,0,3.59190574687462,0,0,0,2.19828350517124,0,0.517131825446202,0.26446520348538,0.342173675768659,5.63852017853338,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,1.1267183763585,0,1.22021956690538,0.807253238237985,1.798532254171,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0.449803112163605,0,0,0,1.04349012362347,0.450772826991655,0.380805212168795,0,0,0.214821114084977,0,0,6.40044423461046,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0.308801447160972,0,0.176689145945881,0,0,0,0,0,1.93561810612423,0.389720617678777,0.930053882193542,0.327130788511688,0,0,1.26787274015176,0,0,0,0,0.184105950251841,1.53867458491389,0,0,0,0.786329709279482,0,0,0,0,0,0,0.552032215008773,0,0,0,0.578063025868136,0,0.798169295285756,0.205116364240755,0,0.899044282034833,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| |||
|short_description=p2@CHRNB1 | |||
}} |
Latest revision as of 11:05, 17 September 2015
Short description: | p2@CHRNB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CHRNB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000536404, uc010vty.1_5end |
EntrezGene: | CHRNB1 |
HGNC: | 1961 |
UniProt: | B7Z5H1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.83e-15 | 253 |
endodermal cell | 9.76e-12 | 58 |
general ecto-epithelial cell | 2.52e-10 | 14 |
embryonic stem cell | 7.53e-10 | 5 |
kidney tubule cell | 4.10e-09 | 10 |
nephron tubule epithelial cell | 4.10e-09 | 10 |
endo-epithelial cell | 8.31e-08 | 42 |
epithelial cell of Malassez | 1.21e-07 | 3 |
gingival epithelial cell | 3.82e-07 | 3 |
ecto-epithelial cell | 5.18e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 4.10e-09 | 10 |
gingival epithelium | 3.82e-07 | 3 |
primary subdivision of cranial skeletal system | 4.19e-07 | 5 |