FFCP PHASE1:Hg19::chr19:14223369..14223385,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5566 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9380 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z708 | |||
|association_with_transcript=73bp_to_ENST00000536649,uc010xnm.1_5end | |||
|cluster_id=chr19:14223369..14223385,- | |||
|description=CAGE_peak_5_at_PRKACA_5end | |||
|id=chr19:14223369..14223385,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002602;1.49e-19;2!CL:0002575;2.48e-19;2!CL:0002549;3.59e-19;2!CL:0000228;2.87e-10;1!CL:0002372;2.87e-10;1!CL:0000669;3.87e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002602,1.64e-19,2;CL:0002549,1.97e-19,2;CL:0002575,4.13e-19,2;CL:0000228,3.01e-10,1;CL:0002372,3.01e-10,1;CL:0000669,4.98e-10,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.56e-10!115;UBERON:0002616!1.07e-07!59;UBERON:0000955!6.95e-07!69;UBERON:0006238!6.95e-07!69;UBERON:0000073!9.74e-07!94;UBERON:0001016!9.74e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0006444;1.49e-19;2!UBERON:0001995;1.49e-19;2!UBERON:0004715;1.49e-19;2!UBERON:0005629;3.59e-19;2!UBERON:0005358;3.59e-19;2!UBERON:0001886;3.59e-19;2!UBERON:0004086;3.59e-19;2!UBERON:0005282;3.59e-19;2!UBERON:0005281;3.59e-19;2!UBERON:0002418;2.32e-13;3!UBERON:0004755;2.32e-13;3!UBERON:0007195;1.19e-10;1!UBERON:0001301;2.87e-10;1!UBERON:0011135;2.27e-08;5!UBERON:0002216;2.27e-08;5!UBERON:0011134;2.27e-08;5!UBERON:0002209;2.27e-08;5!UBERON:0002213;2.27e-08;5!UBERON:0007844;2.27e-08;5!UBERON:0011138;2.27e-08;5!UBERON:0001130;2.27e-08;5!UBERON:0001066;2.27e-08;5!UBERON:0001468;2.27e-08;5!UBERON:0005284;3.21e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006444,1.64e-19,2;UBERON:0001995,1.64e-19,2;UBERON:0004715,1.64e-19,2;UBERON:0005629,1.97e-19,2;UBERON:0005358,1.97e-19,2;UBERON:0001886,1.97e-19,2;UBERON:0004086,1.97e-19,2;UBERON:0005282,1.97e-19,2;UBERON:0005281,1.97e-19,2;UBERON:0002418,2.47e-13,3;UBERON:0004755,2.47e-13,3;UBERON:0007195,1.43e-10,1;UBERON:0001301,2.08e-10,1;UBERON:0011135,2.36e-08,5;UBERON:0002216,2.36e-08,5;UBERON:0011134,2.36e-08,5;UBERON:0002209,2.36e-08,5;UBERON:0002213,2.36e-08,5;UBERON:0005856,2.36e-08,5;UBERON:0005866,2.36e-08,5;UBERON:0005863,2.36e-08,5;UBERON:0007844,2.36e-08,5;UBERON:0011138,2.36e-08,5;UBERON:0001130,2.36e-08,5;UBERON:0001066,2.36e-08,5;UBERON:0001468,2.36e-08,5;UBERON:0005284,2.54e-08,5 | |||
|phase1_expression=0.54503513781167,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,2.10402800032079,2.31978163009541,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0.933633106199299,0.134710672069688,0.326923806226917,1.66493170409425,2.30470369792,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,7.8224766164908,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0,7.15312891703765,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0.542530047399471,0,0,0,0,0,0,0,0,0.184369168541703,0,6.06983588134496,1.02943027143257,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0.256278298511402,0,0,0,0,0.177561725313127,0.574890092096664,0.519254429183621,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0,0.859361958946189,0.290033387828457,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0.372158369359667,0.632758849437452,0,0,0,2.22742273548156,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49553699578462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,2.22273980289274,0,0,0,0,0.787139999965761,0,0,0,0.472775363535873,0.344743373241465,0,0,0.885741385813839,0.120596438625408,1.52581736317083,0.552896299656123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0.586993856796269,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0.681552087141687,0,0,0,0.517131825446202,0.13223260174269,0,1.40963004463334,0,0,0,0,0,0,0,1.08803560673895,0,0,0.327872630709804,0,0,0.122026264901963,0.1251909307065,0,0.443716206147409,0.434674820589684,0.138348634936231,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,2.66943366478961,0,0.302461847526478,0.15543720058278,0.591420599958536,0.159296767163702,0,0,0,0,0,0,0,0,0.363697318405119,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0,0,0,0.619678821295011,0,2.22603045457393,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42899623863589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,1.16241425368125,0,1.60342272946051,0,0,0,0.860454717640555,0.118332000730565,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17785080268967,0,0,0.169927114687817,0.281951753939561,0.386747327841463,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0.126698501011437,0,0,0,0,0.757786982182394,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p5@PRKACA | |||
}} |
Latest revision as of 03:46, 16 September 2015
Short description: | p5@PRKACA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PRKACA_5end |
Coexpression cluster: | NA |
Association with transcript: | 73bp_to_ENST00000536649, uc010xnm.1_5end |
EntrezGene: | PRKACA |
HGNC: | 9380 |
UniProt: | B7Z708 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 1.64e-19 | 2 |
fibroblast of choroid plexus | 1.97e-19 | 2 |
central nervous system pericyte | 4.13e-19 | 2 |
multinucleate cell | 3.01e-10 | 1 |
myotube | 3.01e-10 | 1 |
pericyte cell | 4.98e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
annulus fibrosus | 1.64e-19 | 2 |
fibrocartilage | 1.64e-19 | 2 |
annulus fibrosus disci intervertebralis | 1.64e-19 | 2 |
vascular plexus | 1.97e-19 | 2 |
ventricle of nervous system | 1.97e-19 | 2 |
choroid plexus | 1.97e-19 | 2 |
brain ventricle | 1.97e-19 | 2 |
ventricular system of brain | 1.97e-19 | 2 |
ventricular system of central nervous system | 1.97e-19 | 2 |
cartilage tissue | 2.47e-13 | 3 |
skeletal tissue | 2.47e-13 | 3 |
stroma of bone marrow | 1.43e-10 | 1 |
epididymis | 2.08e-10 | 1 |
intervertebral cartilage | 2.36e-08 | 5 |
symphysis | 2.36e-08 | 5 |
nonsynovial joint | 2.36e-08 | 5 |
fibrous joint | 2.36e-08 | 5 |
cartilaginous joint | 2.36e-08 | 5 |
developing mesenchymal condensation | 2.36e-08 | 5 |
pre-cartilage condensation | 2.36e-08 | 5 |
cartilaginous condensation | 2.36e-08 | 5 |
cartilage element | 2.36e-08 | 5 |
post-cranial axial skeletal system | 2.36e-08 | 5 |
vertebral column | 2.36e-08 | 5 |
intervertebral disk | 2.36e-08 | 5 |
intervertebral joint | 2.36e-08 | 5 |
brain vasculature | 2.54e-08 | 5 |