FFCP PHASE1:Hg19::chr19:41699135..41699159,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29785 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15654 | |||
|TSSclassifier=strong | |||
|UniProt=B4DJI0 | |||
|association_with_transcript=0bp_to_ENST00000542619_5end | |||
|cluster_id=chr19:41699135..41699159,+ | |||
|description=CAGE_peak_1_at_CYP2S1_5end | |||
|id=chr19:41699135..41699159,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.49e-17!254;CL:0002009!5.88e-13!65;CL:0002194!5.75e-12!63;CL:0000576!5.75e-12!63;CL:0000040!5.75e-12!63;CL:0000559!5.75e-12!63;CL:0000557!1.88e-11!71;CL:0000839!1.83e-09!70;CL:0002076!3.87e-09!43;CL:0000223!6.38e-09!59;CL:0000766!1.16e-08!76;CL:0000860!5.02e-08!45;CL:0002057!1.65e-07!42;CL:0002368!2.36e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.33e-09;42!CL:0000473;1.56e-08;39!CL:0000234;1.56e-08;39!CL:0000860;3.53e-08;33!CL:0002057;3.53e-08;33!CL:0002368;1.06e-07;13!CL:0000576;2.70e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.30e-18,253;CL:0002009,3.77e-14,61;CL:0002194,5.50e-13,59;CL:0000576,5.50e-13,59;CL:0000040,5.50e-13,59;CL:0000559,5.50e-13,59;CL:0000557,3.70e-12,67;CL:0002076,3.06e-11,42;CL:0000473,1.23e-10,48;CL:0000234,1.23e-10,48;CL:0000223,1.98e-10,58;CL:0000839,7.46e-10,66;CL:0000766,1.18e-09,72;CL:0000860,1.34e-08,42;CL:0002057,1.34e-08,42;CL:0002368,9.69e-08,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.05e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.28e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000922!6.28e-16!612;UBERON:0004119!7.69e-16!169;UBERON:0000925!7.69e-16!169;UBERON:0006595!7.69e-16!169;UBERON:0004921!4.89e-14!129;UBERON:0004185!4.89e-14!129;UBERON:0001007!2.28e-13!155;UBERON:0001555!2.28e-13!155;UBERON:0007026!2.28e-13!155;UBERON:0002050!2.45e-13!605;UBERON:0005423!2.45e-13!605;UBERON:0000923!2.84e-13!604;UBERON:0005291!2.84e-13!604;UBERON:0006598!2.84e-13!604;UBERON:0002532!2.84e-13!604;UBERON:0000468!5.08e-12!659;UBERON:0000467!5.75e-12!625;UBERON:0000480!9.73e-12!626;UBERON:0000062!9.81e-11!511;UBERON:0000077!3.71e-09!130;UBERON:0005911!3.01e-08!82;UBERON:0002371!3.23e-08!80;UBERON:0000926!5.22e-08!448;UBERON:0004120!5.22e-08!448;UBERON:0006603!5.22e-08!448;UBERON:0000065!9.11e-08!53;UBERON:0002405!1.19e-07!115;UBERON:0001041!1.48e-07!98;UBERON:0002193!6.20e-07!112;UBERON:0002390!6.50e-07!102;UBERON:0003061!6.50e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.59e-07;22!UBERON:0004921;8.35e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.78e-16,160;UBERON:0000925,1.78e-16,160;UBERON:0006595,1.78e-16,160;UBERON:0004921,1.25e-15,118;UBERON:0001007,3.19e-14,145;UBERON:0001555,3.19e-14,145;UBERON:0007026,3.19e-14,145;UBERON:0000922,1.25e-10,592;UBERON:0002371,3.20e-09,76;UBERON:0005423,9.80e-09,581;UBERON:0001041,1.01e-08,87;UBERON:0002050,1.07e-08,564;UBERON:0002405,1.52e-08,93;UBERON:0000065,3.43e-08,54;UBERON:0002390,4.39e-08,98;UBERON:0003061,4.39e-08,98;UBERON:0000923,4.81e-08,560;UBERON:0010316,4.81e-08,560;UBERON:0005291,4.81e-08,560;UBERON:0006598,4.81e-08,560;UBERON:0010317,4.81e-08,560;UBERON:0002532,4.81e-08,560;UBERON:0005911,4.84e-08,82;UBERON:0002193,8.90e-08,108;UBERON:0001474,2.17e-07,82;UBERON:0005409,2.82e-07,25;UBERON:0004765,5.00e-07,90;UBERON:0008947,5.99e-07,38;UBERON:0003258,5.99e-07,38 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,16.2184398090996,8.37361401566913,0.436882744260345,0.527533956456907,0,0,1.34465029290355,1.80808358407193,0.730310090387373,0.487932798790507,0.123121058076788,0.204000691244253,0.626909442956176,0,0,0.125542639594803,0,0.0821005894499457,0,5.50709987588466,2.30297638858328,13.3141866051825,30.3409004078046,36.4459161721683,37.3451550268456,0,0,2.34880351467878,3.87796785972314,5.01361118675354,6.94434786290726,5.37397138175818,6.15397965436061,4.63636021741536,10.3232749533491,12.0920301980419,8.9756102639492,5.81072592264212,4.11167888021826,0.619412741790207,3.45230870786581,4.61089271752381,2.60130452877444,1.72372840368309,5.16387746867061,0,6.58848188399116,6.00393530127261,3.82029923556644,5.20342617030534,3.85114832491312,5.75403413219137,3.29851300186716,5.38551875578406,1.70489900213078,1.7412554317715,2.8369261234557,3.11411124497787,2.76373531782418,1.0429658368404,3.25783267057675,2.42159801053347,4.41933163185078,2.84816148696796,2.11255286311942,1.27562579979026,1.04829322754188,7.52601828681517,5.25619124945272,2.73233497385036,0,0.19891667719909,0,0,0,0,0.853460445133014,0,0,0,0,0,0.587237189370939,0,0,0,1.58030450865046,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602300476311091,0.511946444617674,0,0.236777252044017,0,0,0,0,0,0,1.2786256184353,0,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.351339142772504,1.57174890597255,74.6805340999712,23.3594198954191,7.46459005405772,5.92041106817509,9.1740992758017,0.476981248610684,0,0.371457501329565,0.198762407366705,0,1.04142150482278,0,2.93649605346934,0.275118041940067,0,0.258416759169329,0.35576626268671,0,2.01414658554573,0.760272105718513,1.22031028774085,0.735326160691737,0,1.60739510911344,1.34717623575702,0.675668882899933,1.53316637465883,0.949265659568129,0.549605231791222,0,0,50.1508159963915,0,1.01304409331664,0.926864265692532,1.14734648299525,1.06400514659507,0,4.2699598291882,0.49333509683432,0,0.269421344139376,0.490385709340376,0.151357427644931,0,3.04617861383936,0,1.1409436430889,0,0,0,0,0,0.859840221182376,0.309977343527296,0,0,10.0117749813183,13.6537446945085,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0,0,0.646584227275248,0,0,0.169560592310488,24.737389204902,19.9104668031309,18.9291032956743,88.7968580623454,79.9154502978556,62.5123412638009,37.5253019155641,70.649838245176,45.6221698844787,0,0,1.38134921352481,0,0,3.43089720115547,3.70886318171824,2.89213235860178,3.639701100169,2.61455332910887,3.08451804844426,5.25842101824641,4.51309369788296,4.23221872641029,6.64339909162183,1.40241773803446,2.057870056657,0,0,0.982827216677626,0,0,31.7310171441233,3.25978839567199,23.9255622190804,17.9842805212191,5.73015142746296,23.2396997347909,0.651616610620649,11.4392826380754,0,0.115930404975077,0.352226082707465,0.288732895522148,0,0.190254152234598,0,0,8.8638122191463,10.5301919312657,10.5528125224997,9.3733833986777,6.38332087155666,14.319284821481,0.0895585227028483,0.581267877027924,0.766765358330422,0,0,0.207328115540772,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0,1.34557301214433,1.74384027533312,1.3200891447771,2.84397774667111,0,0,0.531876233169741,0,0,0,0.266422179016099,8.00676764485626,0.542621605391443,1.64648067356154,0,4.97548728239564,1.58390374586686,4.52159065589379,26.1460037580088,6.49824442683371,1.2162378064119,5.52482800575339,6.32501818449095,0,0,0,0,0.410952645100767,0,0,1.18218456121156,0.215627574859517,2.18183161675572,0,0,0,0.335032530668698,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0.157702415033935,0,0,0,0,0,0,0.955719759148911,1.95801157462741,0,3.51505644408909,1.94142780736755,5.44310544797566,1.5156378572313,0,1.5119514666484,0,0,0,0,0,0,0,0.308419387605311,0.355123450626254,0.0821271560138091,2.07701771673448,0.116210378459959,39.2793211172772,17.4440629163858,6.62983120338454,17.6814250173494,0.546273504020151,2.62248829918848,1.80479845162965,2.00239876471478,9.41219723012226,0,2.11103257785751,3.4120015221269,1.53084334748864,1.51141141271498,1.54227252690289,8.67028600140329,9.03041592938736,0.764628819135115,1.66215201785745,1.79099803777743,0.219259876645935,0,1.02580050046556,3.28014645699706,0,2.7821073144885,0,0,31.5846045897895,28.6026508256069,1.6068392984416,0,0.154048617114644,0,0.137836572484531,0,0.145016693914229,0.255679882248303,0,8.76010051413184,6.72665235777872,17.2277161867689,5.8671512896219,0,0,0.6970372701606,0.924100740528266,2.12922412126809,0.869932992075073,0.55597265731176,0.572499546967965,1.48863347743867,0.316379424718726,0.571890581771475,0.255897791311334,0,0,9.41938368239076,0.719489830333259,1.92175920815238,1.88499843753098,2.62837226045311,12.6808256938407,0.421258456238981,5.36397112998549,31.4390401624357,10.5650146756755,2.18399858252777,11.1710291243433,1.13008116620243,4.96228809191512,15.9225354057893,12.7150756723591,1.73632660280006,1.9676842561399,0,2.478587984798,1.40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| |||
|short_description=p1@CYP2S1 | |||
}} |
Latest revision as of 03:42, 18 September 2015
Short description: | p1@CYP2S1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CYP2S1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000542619_5end |
EntrezGene: | CYP2S1 |
HGNC: | 15654 |
UniProt: | B4DJI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.30e-18 | 253 |
macrophage dendritic cell progenitor | 3.77e-14 | 61 |
monopoietic cell | 5.50e-13 | 59 |
monocyte | 5.50e-13 | 59 |
monoblast | 5.50e-13 | 59 |
promonocyte | 5.50e-13 | 59 |
granulocyte monocyte progenitor cell | 3.70e-12 | 67 |
endo-epithelial cell | 3.06e-11 | 42 |
defensive cell | 1.23e-10 | 48 |
phagocyte | 1.23e-10 | 48 |
endodermal cell | 1.98e-10 | 58 |
myeloid lineage restricted progenitor cell | 7.46e-10 | 66 |
myeloid leukocyte | 1.18e-09 | 72 |
classical monocyte | 1.34e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.34e-08 | 42 |
respiratory epithelial cell | 9.69e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.78e-16 | 160 |
endoderm | 1.78e-16 | 160 |
presumptive endoderm | 1.78e-16 | 160 |
subdivision of digestive tract | 1.25e-15 | 118 |
digestive system | 3.19e-14 | 145 |
digestive tract | 3.19e-14 | 145 |
primitive gut | 3.19e-14 | 145 |
embryo | 1.25e-10 | 592 |
bone marrow | 3.20e-09 | 76 |
developing anatomical structure | 9.80e-09 | 581 |
foregut | 1.01e-08 | 87 |
embryonic structure | 1.07e-08 | 564 |
immune system | 1.52e-08 | 93 |
respiratory tract | 3.43e-08 | 54 |
hematopoietic system | 4.39e-08 | 98 |
blood island | 4.39e-08 | 98 |
germ layer | 4.81e-08 | 560 |
germ layer / neural crest | 4.81e-08 | 560 |
embryonic tissue | 4.81e-08 | 560 |
presumptive structure | 4.81e-08 | 560 |
germ layer / neural crest derived structure | 4.81e-08 | 560 |
epiblast (generic) | 4.81e-08 | 560 |
endo-epithelium | 4.84e-08 | 82 |
hemolymphoid system | 8.90e-08 | 108 |
bone element | 2.17e-07 | 82 |
gastrointestinal system | 2.82e-07 | 25 |
skeletal element | 5.00e-07 | 90 |
respiratory primordium | 5.99e-07 | 38 |
endoderm of foregut | 5.99e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.28e-08 | 106 |