FFCP PHASE1:Hg19::chr19:46916658..46916668,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83987 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25367 | |||
|TSSclassifier=strong | |||
|UniProt=F5GX02 | |||
|association_with_transcript=157bp_to_ENST00000540252_5end | |||
|cluster_id=chr19:46916658..46916668,- | |||
|description=CAGE_peak_5_at_CCDC8_5end | |||
|id=chr19:46916658..46916668,- | |||
|ontology_enrichment_celltype=CL:0000055!1.19e-08!180;CL:0000057!2.39e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0002600;2.68e-09;2!CL:0000669;3.55e-09;4!CL:0002575;9.52e-09;2!CL:0002598;9.52e-09;2!CL:0002195;2.30e-08;2!CL:0002571;2.30e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002600,2.20e-09,2;CL:0000669,4.11e-09,4;CL:0002575,7.00e-09,2;CL:0002598,1.99e-08,2;CL:0002195,5.26e-08,2;CL:0002571,5.26e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!2.00e-12!69;UBERON:0007100!1.01e-08!27;UBERON:0000481!4.64e-08!347;UBERON:0000468!1.02e-07!659;UBERON:0000475!1.89e-07!365;UBERON:0000948!5.32e-07!24;UBERON:0005498!5.32e-07!24;UBERON:0004140!5.32e-07!24;UBERON:0009881!5.32e-07!24;UBERON:0004141!5.32e-07!24;UBERON:0003084!5.32e-07!24;UBERON:0007005!5.32e-07!24;UBERON:0004139!5.32e-07!24;UBERON:0004291!5.32e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;4.46e-12;15!UBERON:0001558;4.46e-12;15!UBERON:0000922;9.37e-10;49!UBERON:0003126;1.43e-09;7!UBERON:0001005;1.43e-09;7!UBERON:0002185;2.01e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,6.55e-12,15;UBERON:0001558,6.55e-12,15;UBERON:0003126,1.54e-09,7;UBERON:0001005,1.54e-09,7;UBERON:0002185,3.08e-07,5 | |||
|phase1_expression=0.54503513781167,0,0.563817616383885,1.0007329835313,0.446961094427288,0,0,0,0,0.491467873003018,0.697801167972428,0.218441372130172,0,0.866364470720326,0.662794751455832,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0.919421224478927,1.204823675113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.511450247374121,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.351339142772504,0.327447688744282,1.45718115317017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0.286836620748814,0,0.560677600142307,1.06748995729705,0.49333509683432,1.24484414159907,0.404132016209064,0.817309515567294,0.302714855289863,2.88087962239999,0.70296429550139,0,0,0,0.23486899728753,0.323745888736263,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0.113432183160021,0.358779271377724,0.427114777637135,0.423863802319124,0,0,0.515281080091258,0,0.506328996723799,0.68205903612839,0.252433774244115,0.552299391853796,2.26304479546337,0.355009592516614,0.403008392910561,0,0.386521706326594,0,0,0.365921118388786,0.265059536642971,0.232387885739037,0.414644220061482,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,2.94017422771084,0,0,0,0,0,0,0.548751427043128,0,0,0.185176890317059,0.651616610620649,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.268675568108545,0.871901815541886,2.30029607499127,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.22001485746285,0.258543431515556,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,1.00084595560703,4.88359444852299,1.64648067356154,0,1.06617584622764,0.791951872933429,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.49076596687656,0.500170521059677,0.542530047399471,0.207970861530807,0.356857977594324,0,0.35142424497814,6.92176029373754,2.27407504055985,5.17365356462525,0,0.184369168541703,0.347534457872331,1.56640925970192,2.40200396667599,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0.561320188866147,0.128139149255701,0.511707249066704,0.160853921143607,0,0.308419387605311,0.355123450626254,0.164254312027618,0.519254429183621,0.116210378459959,0,0.601519410909855,0.0920809889358963,0.114814448164607,0.182091168006717,1.04899531967539,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,1.00337954770971,0.254876273045038,0,0.223874754722178,0,0,0,0.984043937099117,0,0.103041011647722,0,0,0,0,0,0.48335359146061,0.154048617114644,0.15350367472613,0,0.429680979473094,0.435050081742686,0.255679882248303,1.60257664164127,0,0.384380134730212,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,0.143124886741991,0.744316738719335,0.316379424718726,0,1.02359116524534,2.1396949401696,0,0,0.539617372749944,1.64722217841633,0.471249609382746,0.404364963146632,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,2.89387767133344,3.27947376023316,0,0.30982349809975,0,0.430234056612155,0.196498082026242,0,0,0,0.329294892959902,0,0.349934720244983,0.0962221127255121,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0.962479855263359,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.921482106297696,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.846452843541768,0,0,0,0,0.638002319463839,0.183195186803725,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,2.41981432097328,0.30607276163049,0.126373159256976,1.35291077473043,0.207376382794494,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.0969890164884194,0.706049013532002,1.12990370390266,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,1.11712960508902,0.458320848023367,0,0.798716001995964,0.429226048136571,0.669514372325618,1.81395375714161,0,0,0,0,0,0,0,0,0,0,0.275078873194468,0.415440338029185,0,0,0,0,0,0.944182586429966,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0.113312091520126,0,1.32506888912221,0.129282956361551,0,0,0,0,1.10043013569766,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0.251567901752575,1.77962244319307,0,0.302461847526478,0.310874401165561,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0.464033759878494,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41070377476274,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0.235939446695481,0,0,0,0,0.198916222116275,2.55715116387475,0.20170506870352,0.781514011233092,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.455324382702595,0.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| |||
|short_description=p5@CCDC8 | |||
}} |
Latest revision as of 20:34, 18 September 2015
Short description: | p5@CCDC8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CCDC8_5end |
Coexpression cluster: | NA |
Association with transcript: | 157bp_to_ENST00000540252_5end |
EntrezGene: | CCDC8 |
HGNC: | 25367 |
UniProt: | F5GX02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of trachea | 2.20e-09 | 2 |
pericyte cell | 4.11e-09 | 4 |
central nervous system pericyte | 7.00e-09 | 2 |
bronchial smooth muscle cell | 1.99e-08 | 2 |
hepatic stem cell | 5.26e-08 | 2 |
hepatic mesenchymal stem cell | 5.26e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 6.55e-12 | 15 |
lower respiratory tract | 6.55e-12 | 15 |
trachea | 1.54e-09 | 7 |
respiratory airway | 1.54e-09 | 7 |
bronchus | 3.08e-07 | 5 |