FFCP PHASE1:Hg19::chr19:51452278..51452302,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:51452278..51452302,- | |||
|coexpression_cluster_id=C2500 | |||
|description=CAGE_peak_at_chr19:51452278..51452302,- | |||
|id=chr19:51452278..51452302,- | |||
|ontology_enrichment_celltype=CL:0000066!7.68e-17!254;CL:0002159!1.16e-14!13;CL:0000076!7.65e-13!62;CL:0002251!7.72e-13!21;CL:0002077!9.11e-13!33;CL:0002076!1.01e-12!43;CL:0002621!2.79e-10!3;CL:0000223!1.49e-09!59;CL:0000240!1.39e-08!6;CL:0000311!1.39e-08!6;CL:0000079!1.39e-08!6;CL:0000237!1.39e-08!6;CL:0000036!1.39e-08!6;CL:0000357!1.39e-08!6;CL:0000114!1.39e-08!6;CL:0002327!9.56e-08!4;CL:0000575!1.31e-07!2;CL:1000415!3.44e-07!2;CL:0000220!7.24e-07!246;CL:0000362!8.49e-07!8;CL:0002321!9.53e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.16e-27;14!CL:0000575;3.12e-17;2!CL:0000312;2.80e-15;5!CL:0000362;8.74e-15;9!CL:0002251;8.11e-14;20!CL:0000240;7.96e-13;6!CL:0000311;7.96e-13;6!CL:0000079;7.96e-13;6!CL:0000237;7.96e-13;6!CL:0002077;3.04e-12;34!CL:0002231;4.85e-12;3!CL:0002621;1.51e-11;3!CL:0002076;5.78e-10;42!CL:0000622;2.39e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.36e-27,14;CL:0000575,3.67e-17,2;CL:0000312,3.16e-15,5;CL:0000362,9.39e-15,9;CL:0002076,3.51e-14,42;CL:0002077,3.84e-14,34;CL:0002251,8.11e-14,20;CL:0000240,8.80e-13,6;CL:0000311,8.80e-13,6;CL:0000079,8.80e-13,6;CL:0000237,8.80e-13,6;CL:0000036,8.80e-13,6;CL:0000357,8.80e-13,6;CL:0000114,8.80e-13,6;CL:0002231,4.60e-12,3;CL:0002621,1.22e-11,3;CL:0000076,3.53e-11,63;CL:0000066,1.96e-10,253;CL:0000223,6.67e-10,58;CL:0000221,1.84e-07,72;CL:0000622,2.28e-07,5;CL:0002321,4.29e-07,250 | |||
|ontology_enrichment_development_v019=UBERON:0008814;6.47e-17;2!UBERON:0010056;6.47e-17;2!CL:0000357;7.96e-13;6!CL:0000114;7.96e-13;6 | |||
|ontology_enrichment_disease=DOID:1749!1.63e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.42e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.59e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000166!8.40e-16!21;UBERON:0000165!2.91e-13!28;UBERON:0000930!2.91e-13!28;UBERON:0000161!2.73e-12!35;UBERON:0001949!2.79e-10!3;UBERON:0001004!2.82e-10!72;UBERON:0003729!3.93e-10!5;UBERON:0001723!5.31e-10!3;UBERON:0001033!5.31e-10!3;UBERON:0010056!5.31e-10!3;UBERON:0001444!2.13e-09!48;UBERON:0003102!2.96e-09!95;UBERON:0003343!6.95e-08!4;UBERON:0004785!6.95e-08!4;UBERON:0001911!9.56e-08!4;UBERON:0005333!9.56e-08!4;UBERON:0008425!9.56e-08!4;UBERON:0005311!9.56e-08!4;UBERON:0001007!3.25e-07!155;UBERON:0001555!3.25e-07!155;UBERON:0007026!3.25e-07!155;UBERON:0005157!3.26e-07!51;UBERON:0004119!8.88e-07!169;UBERON:0000925!8.88e-07!169;UBERON:0006595!8.88e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.44e-18;4!UBERON:0004785;1.44e-18;4!UBERON:0003729;3.43e-15;13!UBERON:0000161;1.44e-14;19!UBERON:0000166;1.44e-14;19!UBERON:0001003;2.24e-13;15!UBERON:0007376;2.24e-13;15!UBERON:0000165;3.65e-13;28!UBERON:0000974;1.42e-12;6!UBERON:0010371;9.86e-12;31!UBERON:0001723;1.36e-11;3!UBERON:0001033;1.36e-11;3!UBERON:0001949;1.51e-11;3!UBERON:0000344;7.98e-10;20!UBERON:0007029;4.15e-09;1!UBERON:0004913;4.15e-09;1!UBERON:0003703;4.15e-09;1!UBERON:0001174;4.15e-09;1!UBERON:0004914;4.15e-09;1!UBERON:0000964;4.51e-09;4!UBERON:0010409;4.51e-09;4!UBERON:0007811;3.37e-08;52!UBERON:0000033;1.05e-07;50!UBERON:0001444;1.18e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.13e-20,99;UBERON:0003343,1.94e-18,4;UBERON:0004785,1.94e-18,4;UBERON:0000166,5.91e-17,22;UBERON:0000161,1.03e-16,36;UBERON:0003729,3.53e-15,13;UBERON:0001003,2.24e-13,15;UBERON:0007376,2.24e-13,15;UBERON:0007383,2.24e-13,15;UBERON:0000165,1.10e-12,29;UBERON:0000930,1.10e-12,29;UBERON:0000033,1.22e-12,56;UBERON:0001444,7.49e-12,49;UBERON:0001949,1.22e-11,3;UBERON:0001723,1.59e-11,3;UBERON:0001033,1.59e-11,3;UBERON:0010056,1.59e-11,3;UBERON:0000153,2.89e-11,62;UBERON:0007811,2.89e-11,62;UBERON:0000344,8.14e-10,20;UBERON:0007029,3.53e-09,1;UBERON:0000964,4.89e-09,4;UBERON:0010409,4.89e-09,4;UBERON:0004348,4.89e-09,4;UBERON:0005427,4.89e-09,4;UBERON:0004913,5.72e-09,1;UBERON:0003703,5.72e-09,1;UBERON:0001174,5.72e-09,1;UBERON:0004914,5.72e-09,1;UBERON:0004121,6.95e-09,171;UBERON:0000924,6.95e-09,171;UBERON:0006601,6.95e-09,171;UBERON:0000974,1.08e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18577172975525,5.93255108455087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67195621010264,0.818238361772504,1.72082757233402,0,0,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.14601598288303,2.24803506515239,4.32274581370013,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35174979478403,0.141775097242386,0.716468181622786,0.871901815541886,11.1180976957911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81215528727884,27.1638917360894,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0,0,6.50060246036521,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94048259177238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,2.73771935828724,0.400794101257669,0,0.799238438328521,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24632101408756,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.106787412567695,0,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0.964570191354574,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,1.67855409263333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,1.07962490351128,0,32.6502905368589,1.03973099535304,0,0,0,0,0,0,0,0,1.03499260351932,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51215543128185,1.38251932362818,0.430227358820278,0,0,0,21.3069387745967,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13668047327359,0,0,0,0,0,0,0,0,0,0,4.35433495793923,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr19:51452278..51452302,- | |||
}} |
Latest revision as of 16:34, 27 July 2015
Short description: | p@chr19:51452278..51452302, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:51452278..51452302, - |
Coexpression cluster: | C2500_Mammary_Prostate_oral_serous_Corneal_Keratinocyte_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.36e-27 | 14 |
corneal epithelial cell | 3.67e-17 | 2 |
keratinocyte | 3.16e-15 | 5 |
epidermal cell | 9.39e-15 | 9 |
endo-epithelial cell | 3.51e-14 | 42 |
ecto-epithelial cell | 3.84e-14 | 34 |
epithelial cell of alimentary canal | 8.11e-14 | 20 |
stratified squamous epithelial cell | 8.80e-13 | 6 |
keratin accumulating cell | 8.80e-13 | 6 |
stratified epithelial cell | 8.80e-13 | 6 |
keratinizing barrier epithelial cell | 8.80e-13 | 6 |
epithelial fate stem cell | 8.80e-13 | 6 |
stratified epithelial stem cell | 8.80e-13 | 6 |
surface ectodermal cell | 8.80e-13 | 6 |
epithelial cell of prostate | 4.60e-12 | 3 |
gingival epithelial cell | 1.22e-11 | 3 |
squamous epithelial cell | 3.53e-11 | 63 |
epithelial cell | 1.96e-10 | 253 |
endodermal cell | 6.67e-10 | 58 |
ectodermal cell | 1.84e-07 | 72 |
acinar cell | 2.28e-07 | 5 |
embryonic cell | 4.29e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.13e-20 | 99 |
mucosa of oral region | 1.94e-18 | 4 |
respiratory system mucosa | 1.94e-18 | 4 |
oral opening | 5.91e-17 | 22 |
orifice | 1.03e-16 | 36 |
mouth mucosa | 3.53e-15 | 13 |
skin epidermis | 2.24e-13 | 15 |
outer epithelium | 2.24e-13 | 15 |
enveloping layer of ectoderm | 2.24e-13 | 15 |
mouth | 1.10e-12 | 29 |
stomodeum | 1.10e-12 | 29 |
head | 1.22e-12 | 56 |
subdivision of head | 7.49e-12 | 49 |
gingival epithelium | 1.22e-11 | 3 |
tongue | 1.59e-11 | 3 |
gustatory system | 1.59e-11 | 3 |
future tongue | 1.59e-11 | 3 |
anterior region of body | 2.89e-11 | 62 |
craniocervical region | 2.89e-11 | 62 |
mucosa | 8.14e-10 | 20 |
surface | 3.53e-09 | 1 |
cornea | 4.89e-09 | 4 |
eye surface | 4.89e-09 | 4 |
optic eminence | 4.89e-09 | 4 |
corneal primordium | 4.89e-09 | 4 |
hepatopancreatic ampulla | 5.72e-09 | 1 |
extrahepatic bile duct | 5.72e-09 | 1 |
common bile duct | 5.72e-09 | 1 |
duodenal papilla | 5.72e-09 | 1 |
ectoderm-derived structure | 6.95e-09 | 171 |
ectoderm | 6.95e-09 | 171 |
presumptive ectoderm | 6.95e-09 | 171 |
neck | 1.08e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.59e-09 | 14 |