FFCP PHASE1:Hg19::chr1:114696428..114696440,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=148281 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18638 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T7P8 | |||
|association_with_transcript=31bp_to_ENST00000369547,ENST00000393296,NM_001253772,NR_045589,uc001eev.2_5end | |||
|cluster_id=chr1:114696428..114696440,- | |||
|description=CAGE_peak_4_at_SYT6_5end | |||
|id=chr1:114696428..114696440,- | |||
|ontology_enrichment_celltype=CL:0002322!5.45e-16!5;CL:0000047!1.16e-09!8;CL:0000540!1.24e-08!6;CL:0000031!1.24e-08!6;CL:0000404!1.24e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.30e-26;5!CL:0002321;2.48e-15;15!CL:0000540;2.29e-10;6!CL:0000404;2.29e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.94e-26,5;CL:0000540,2.41e-10,6;CL:0000031,2.41e-10,6;CL:0000404,2.41e-10,6;CL:0000047,5.56e-08,8 | |||
|ontology_enrichment_development_v019=CL:0000031;2.29e-10;6 | |||
|ontology_enrichment_disease=DOID:3095!9.09e-10!22;DOID:2994!9.09e-10!22;DOID:171!2.00e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:3095;8.61e-11;22!DOID:2994;8.61e-11;22!DOID:3193;2.23e-08;2!DOID:962;2.23e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,8.39e-11,22;DOID:2994,8.39e-11,22;DOID:3193,2.00e-08,2;DOID:962,2.00e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.36e-35!94;UBERON:0001016!2.36e-35!94;UBERON:0005743!4.93e-33!86;UBERON:0001017!5.73e-33!82;UBERON:0001049!3.30e-26!57;UBERON:0005068!3.30e-26!57;UBERON:0006241!3.30e-26!57;UBERON:0007135!3.30e-26!57;UBERON:0000955!4.39e-22!69;UBERON:0006238!4.39e-22!69;UBERON:0002780!5.00e-22!41;UBERON:0001890!5.00e-22!41;UBERON:0006240!5.00e-22!41;UBERON:0002020!6.22e-22!34;UBERON:0003528!6.22e-22!34;UBERON:0001893!6.76e-22!34;UBERON:0000924!6.91e-22!173;UBERON:0006601!6.91e-22!173;UBERON:0002346!1.05e-21!90;UBERON:0003080!2.16e-21!42;UBERON:0001869!5.80e-21!32;UBERON:0002616!7.49e-21!59;UBERON:0004121!4.98e-20!169;UBERON:0002791!5.38e-20!33;UBERON:0003075!1.39e-19!86;UBERON:0007284!1.39e-19!86;UBERON:0001950!7.82e-17!20;UBERON:0002619!3.94e-15!22;UBERON:0003056!9.36e-15!61;UBERON:0000956!4.51e-13!25;UBERON:0000203!4.51e-13!25;UBERON:0000369!2.28e-12!4;UBERON:0002435!2.28e-12!4;UBERON:0000204!2.28e-12!4;UBERON:0010082!2.28e-12!4;UBERON:0002308!3.20e-11!9;UBERON:0000125!3.20e-11!9;UBERON:0007023!1.17e-10!115;UBERON:0000033!1.68e-10!123;UBERON:0000153!1.03e-09!129;UBERON:0007811!1.03e-09!129;UBERON:0005383!1.61e-09!3;UBERON:0005382!1.61e-09!3;UBERON:0000988!1.05e-08!3;UBERON:0002420!4.67e-08!9;UBERON:0007245!4.67e-08!9;UBERON:0010009!4.67e-08!9;UBERON:0010011!4.67e-08!9;UBERON:0000454!4.67e-08!9;UBERON:0009663!4.69e-07!7;UBERON:0001873!4.94e-07!2;UBERON:0010122!4.94e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001882;1.92e-15;1!UBERON:0005403;1.92e-15;1!UBERON:0003714;2.23e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001882,3.66e-15,1;UBERON:0005403,3.66e-15,1;UBERON:0003714,2.00e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,1.82960559194393,1.85541675650079,0.929551542956147,0.621966330092223,1.26160425437814,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,1.54657762555539,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0,0.868124974666461,0.885741385813839,0.482385754501632,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.937057782901357,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,1.2378549293751,0,0,0,0.242998226632099,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.372578417648301,1.10678907948985,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0,0.629063767423586,0,3.90384818894258,0.212574920101683,0,1.67593475391973,0,0,0,0,0,1.02766760154335,0,0,0.615349092722265,0.252071696221718,0.484100767249525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,0,0.317079050969534,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.394636641377094,0,0,0,0.314231179832004,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989464650708862,0,0,0,0,0,0,0,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0.756998549010474,2.4038425832013,0,0.61193297845189,0,3.6757959813938,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@SYT6 | |||
}} |
Latest revision as of 06:55, 16 September 2015
Short description: | p4@SYT6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SYT6_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_ENST00000369547, ENST00000393296, NM_001253772, NR_045589, uc001eev.2_5end |
EntrezGene: | SYT6 |
HGNC: | 18638 |
UniProt: | Q5T7P8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.94e-26 | 5 |
neuron | 2.41e-10 | 6 |
neuroblast | 2.41e-10 | 6 |
electrically signaling cell | 2.41e-10 | 6 |
neuronal stem cell | 5.56e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
nucleus accumbens | 3.66e-15 | 1 |
ventral striatum | 3.66e-15 | 1 |
neural tissue | 2.00e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 8.39e-11 | 22 |
germ cell cancer | 8.39e-11 | 22 |
peripheral nerve sheath neoplasm | 2.00e-08 | 2 |
neurofibroma | 2.00e-08 | 2 |