FFCP PHASE1:Hg19::chr1:156722085..156722104,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3068 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4856 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-21bp_to_ENST00000471377_5end | |||
|cluster_id=chr1:156722085..156722104,- | |||
|description=CAGE_peak_9_at_HDGF_5end | |||
|id=chr1:156722085..156722104,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.59e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.46e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!6.84e-10!42;UBERON:0003509!6.84e-10!42;UBERON:0004572!6.84e-10!42;UBERON:0000475!5.86e-09!365;UBERON:0000468!5.95e-08!659;UBERON:0000467!9.08e-08!625;UBERON:0000480!1.47e-07!626;UBERON:0004573!1.63e-07!33;UBERON:0004571!1.63e-07!33;UBERON:0000486!9.65e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.82e-09;42!UBERON:0003509;3.82e-09;42!UBERON:0004572;3.82e-09;42!UBERON:0004573;8.43e-08;33!UBERON:0004571;8.43e-08;33!UBERON:0004457;2.40e-07;9!UBERON:0000042;2.40e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.01e-11,42;UBERON:0003509,2.01e-11,42;UBERON:0004572,2.01e-11,42;UBERON:0004573,1.00e-08,33;UBERON:0004571,1.00e-08,33;UBERON:0004872,3.51e-07,83;UBERON:0007500,4.30e-07,59;UBERON:0001981,4.30e-07,59;UBERON:0004537,4.30e-07,59;UBERON:0006965,4.30e-07,59;UBERON:0003914,9.48e-07,117 | |||
|phase1_expression=1.81678379270557,1.07050261945492,1.9733616573436,3.00219895059391,0.446961094427288,2.61701557230111,0,1.89515962028049,0.783556884599516,1.22866968250754,2.09340350391728,0.218441372130172,0.527533956456907,0.866364470720326,0.994192127183747,1.34465029290355,1.20538905604795,0.730310090387373,0.975865597581014,0.984968464614303,0.612002073732759,0.940364164434263,0.572471974262113,0.273748850145768,0.251085279189606,0.152826811495903,0.246301768349837,0.550975469195755,0,0.383829398097213,0.309632246632152,0.919421224478927,1.204823675113,0.369754010166788,0.619737604642413,0.284338464974843,0.293600439334847,0,0.200544447470142,0.651032612147555,0.447830948479849,0.32389366601898,0.515151135268373,1.01778767145695,0.377875943688809,0.727752183563449,0,0.411167888021826,0.309706370895104,0.28769239232215,0,0,0.689491361473237,0,0,0.941211697713023,0.272906150057846,1.34834090667051,0.918251677112708,0.320929027076094,0,0,0.199463657621632,0,0.870627715885752,0.56738522469114,0,0,0.521482918420201,0.65156653411535,1.81619850790011,1.47311054395026,0,0.422510572623884,1.27562579979026,0.209658645508376,0.561643155732475,0.450530678524519,0.16072558669708,1.14005097496499,0.59675003159727,0.730656615058536,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0.501559486172034,0,0.473447805734733,0,0.779873198196215,0,0,0,0,0.390178042679635,0.493313713811028,0.552700035571697,0,0,0,0,0.453237370790265,0,0,0,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0,0.267440195783507,0,4.87613732627923,1.34140171940727,0.511450247374121,1.44575660953827,0.50133791063589,0.724232594804119,0.795285947051099,0,0.189069634328136,0.221729397462564,0.351339142772504,0.458426764241994,0,0.370784442784429,1.29818957461873,1.56716763569341,0.930705723632056,0,0,0,1.78886166630035,1.72046919021225,1.04142150482278,0.56530794192401,2.51699661725944,1.10047216776027,1.04497483268405,0.258416759169329,0.35576626268671,1.00416183829401,0.402829317109147,0.760272105718513,0.488124115096339,1.10298924103761,0,0.535798369704479,0,0.450445921933289,0,0,0,0,0,2.18047026071267,0.993943903390637,0.25326102332916,0.529636723252875,0.286836620748814,1.41867352879343,1.68203280042692,0,0.74000264525148,0.311211035399766,0.134710672069688,0.326923806226917,0.605429710579726,1.15235184896,0.234321431833797,1.5608003841516,1.71141546463335,0.896692083310806,0.23486899728753,0.161872944368132,0,0.408308342509787,0.737005903870608,0.516628905878827,1.18800285728205,0,0,2.87447256726495,0.505008341862199,0.125118519871964,0,0,0.30648779579902,0.901428353439581,0.680593098960126,0.717558542755448,1.06778694409284,0.847727604638247,0.600182192168805,0.515262646192195,1.8034837803194,1.8611685633159,1.18143432568886,0.876933046450788,0.757301322732344,1.38074847963449,0.323292113637624,1.06502877754984,1.91428986632517,1.18692414617341,0.966304265816484,0.545492241181669,1.72082757233402,0,0,0,0.310983165046111,0.252320850875628,0,1.56449532329816,0.643240938192885,0,0.928735856063958,2.16563844500876,2.83936320095625,1.01150814046861,0.964044119533928,1.54411561825352,2.39667388501647,1.42362371466658,2.56179485504312,1.76599318612811,0.769494313892781,2.95262181849859,0,0.4115740113314,2.94017422771084,0,0.982827216677626,0,0.882926198829301,0,0.686271241194102,0.329250856225877,1.1240175325762,0.100528972411631,0.648119116109707,0,0,1.44331342025273,0.231860809950154,0.352226082707465,0.288732895522148,0.925971025153221,0.380508304469197,0.790204397959275,0.858486162094873,0.492434012174795,0.702012795417713,0.445893486866185,0.93733833986777,0.839910640994298,0.567100388969546,0.358234090811393,0.871901815541886,0.766765358330422,0,0.264145302039678,0,0.144119953416961,0.12624243342638,0,0,0,0,0.102827492703324,0,0.571652865261156,0.336393253036082,0,0.1466765716419,0.646358578788889,0,1.690605505112,0.531876233169741,1.04007436911366,1.02882949704857,0,0.532844358032199,0.428933980974443,0,1.64648067356154,0,0,0,1.50719688529793,1.74306691720059,0.99972991182057,0,0,0,0.718874566474748,0,0,1.59259437334337,1.2328579353023,0.716243852959582,0,0.394061520403854,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0.335032530668698,0.637938751653163,0,0,0,0.36807447515742,0.500170521059677,0,0.623912584592421,1.24900292158013,1.73472656537328,0.468565659970853,0.902838299183157,2.27407504055985,0,1.32845119707087,0.921845842708516,0.695068915744663,0.391602314925481,0.343143423810856,0.82707210449155,0,0.106727557803444,0.303127571446259,0,0.907170879989041,1.98486246255021,1.2276957863045,1.96462066103151,2.17836553734692,2.04682899626681,1.28683136914886,1.48418066444991,0.462629081407967,0.710246901252508,0.98552587216571,0.519254429183621,0.929683027679674,0.483437798366489,0.200506470303285,0.276242966807689,0.229628896329213,0.364182336013434,0.786746489756545,0.451199612907412,0.539107359730903,0.784349769176855,1.46139224653261,0.422206515571503,2.27466768141793,0.680374821106063,0.431831832204279,0,1.6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| |||
|short_description=p9@HDGF | |||
}} |
Latest revision as of 17:57, 17 September 2015
Short description: | p9@HDGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HDGF_5end |
Coexpression cluster: | NA |
Association with transcript: | -21bp_to_ENST00000471377_5end |
EntrezGene: | HDGF |
HGNC: | 4856 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.46e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
artery | 2.01e-11 | 42 |
arterial blood vessel | 2.01e-11 | 42 |
arterial system | 2.01e-11 | 42 |
systemic artery | 1.00e-08 | 33 |
systemic arterial system | 1.00e-08 | 33 |
splanchnic layer of lateral plate mesoderm | 3.51e-07 | 83 |
epithelial tube open at both ends | 4.30e-07 | 59 |
blood vessel | 4.30e-07 | 59 |
blood vasculature | 4.30e-07 | 59 |
vascular cord | 4.30e-07 | 59 |
epithelial tube | 9.48e-07 | 117 |