FFCP PHASE1:Hg19::chr9:124499467..124499496,+: Difference between revisions
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|id=chr9:124499467..124499496,+
|short_description=p@chr9:124499467..124499496,+
|description=CAGE_peak_at_chr9:124499467..124499496,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:124499467..124499496,+ | |||
|description=CAGE_peak_at_chr9:124499467..124499496,+ | |||
|id=chr9:124499467..124499496,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.95e-07!7;CL:0000586!1.95e-07!7 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.49e-15;29!UBERON:0006595;6.00e-10;86!UBERON:0009497;2.89e-07;13!UBERON:0001041;5.28e-07;30 | |||
|ontology_enrichment_disease=DOID:305!2.04e-15!106;DOID:0050687!1.71e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:3493;6.30e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.13e-18,106;DOID:0050687,3.80e-12,143;DOID:3493,5.95e-09,2;DOID:162,1.44e-07,235;DOID:14566,2.87e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004921!2.31e-15!129;UBERON:0004185!2.31e-15!129;UBERON:0007023!8.50e-15!115;UBERON:0001737!8.64e-14!9;UBERON:0000077!6.44e-13!130;UBERON:0001007!1.09e-12!155;UBERON:0001555!1.09e-12!155;UBERON:0007026!1.09e-12!155;UBERON:0004119!2.10e-12!169;UBERON:0000925!2.10e-12!169;UBERON:0006595!2.10e-12!169;UBERON:0005409!3.97e-10!35;UBERON:0001557!2.38e-09!19;UBERON:0001041!3.31e-09!98;UBERON:0000064!2.39e-08!219;UBERON:0008947!6.06e-08!38;UBERON:0003258!6.06e-08!38;UBERON:0002294!6.55e-08!7;UBERON:0001173!6.55e-08!7;UBERON:0004912!6.55e-08!7;UBERON:0000062!1.81e-07!511;UBERON:0000065!2.56e-07!53;UBERON:0000160!4.10e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.15e-23;9!UBERON:0001557;1.15e-23;9!UBERON:0005409;2.73e-18;22!UBERON:0000160;4.74e-16;17!UBERON:0004921;3.08e-15;33!UBERON:0002108;1.10e-12;4!UBERON:0002294;1.36e-08;7!UBERON:0001173;1.36e-08;7!UBERON:0000065;1.39e-08;44!UBERON:0001155;3.69e-07;9!UBERON:0000072;3.70e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,9.89e-24,9;UBERON:0004921,4.15e-21,118;UBERON:0001007,1.42e-18,145;UBERON:0001555,1.42e-18,145;UBERON:0007026,1.42e-18,145;UBERON:0004119,4.07e-16,160;UBERON:0000925,4.07e-16,160;UBERON:0006595,4.07e-16,160;UBERON:0000160,5.20e-16,17;UBERON:0005409,7.48e-16,25;UBERON:0001041,1.02e-13,87;UBERON:0002108,1.12e-12,4;UBERON:0008947,4.18e-11,38;UBERON:0003258,4.18e-11,38;UBERON:0001557,1.40e-10,19;UBERON:0011216,3.19e-09,223;UBERON:0001048,1.98e-07,160;UBERON:0001155,3.90e-07,9;UBERON:0000065,4.25e-07,54 | |||
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| ||
|short_description=p@chr9:124499467..124499496,+ | |||
}} | }} |
Latest revision as of 22:27, 31 July 2015
Short description: | p@chr9:124499467..124499496, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:124499467..124499496, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 9.89e-24 | 9 |
subdivision of digestive tract | 4.15e-21 | 118 |
digestive system | 1.42e-18 | 145 |
digestive tract | 1.42e-18 | 145 |
primitive gut | 1.42e-18 | 145 |
endoderm-derived structure | 4.07e-16 | 160 |
endoderm | 4.07e-16 | 160 |
presumptive endoderm | 4.07e-16 | 160 |
intestine | 5.20e-16 | 17 |
gastrointestinal system | 7.48e-16 | 25 |
foregut | 1.02e-13 | 87 |
small intestine | 1.12e-12 | 4 |
respiratory primordium | 4.18e-11 | 38 |
endoderm of foregut | 4.18e-11 | 38 |
upper respiratory tract | 1.40e-10 | 19 |
organ system subdivision | 3.19e-09 | 223 |
primordium | 1.98e-07 | 160 |
colon | 3.90e-07 | 9 |
respiratory tract | 4.25e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.13e-18 | 106 |
cell type cancer | 3.80e-12 | 143 |
signet ring cell adenocarcinoma | 5.95e-09 | 2 |
cancer | 1.44e-07 | 235 |
disease of cellular proliferation | 2.87e-07 | 239 |