FFCP PHASE1:Hg19::chr21:46348694..46348736,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3689 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6155 | |||
|TSSclassifier=strong | |||
|UniProt=P05107 | |||
|association_with_transcript=16bp_to_ENST00000355153,NM_001127491,uc002zgg.2_5end | |||
|cluster_id=chr21:46348694..46348736,- | |||
|description=CAGE_peak_4_at_ITGB2_5end | |||
|id=chr21:46348694..46348736,- | |||
|ontology_enrichment_celltype=CL:0000077!2.50e-08!19;CL:0000076!3.60e-08!62;CL:0000063!2.07e-07!578 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.65e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.98e-08,106;DOID:7,9.19e-08,39;DOID:0050687,3.33e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.59e-08!40;UBERON:0002199!8.38e-07!45;UBERON:0002416!8.38e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004765;8.61e-07;26 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p4@ITGB2 | |||
}} |
Latest revision as of 20:10, 18 September 2015
Short description: | p4@ITGB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ITGB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000355153, NM_001127491, uc002zgg.2_5end |
EntrezGene: | ITGB2 |
HGNC: | 6155 |
UniProt: | P05107 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.65e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.98e-08 | 106 |
disease of anatomical entity | 9.19e-08 | 39 |
cell type cancer | 3.33e-07 | 143 |