FFCP PHASE1:Hg19::chr2:100937476..100937484,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:100937476..100937484,+ | |||
|description=CAGE_peak_at_chr2:100937476..100937484,+ | |||
|id=chr2:100937476..100937484,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.06e-11;1!CL:0000167;2.07e-11;1!CL:0000164;2.07e-11;1!CL:0000502;2.07e-11;1!CL:0000172;2.07e-11;1!CL:0000173;2.07e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.06e-11,1;CL:0000167,2.18e-11,1;CL:0000164,2.18e-11,1;CL:0000502,2.18e-11,1;CL:0000172,2.18e-11,1;CL:0000173,2.18e-11,1;CL:0002351,2.18e-11,1 | |||
|ontology_enrichment_development_v019=CL:0002351;2.07e-11;1!UBERON:0003124;4.44e-11;1!UBERON:0005795;1.36e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.62e-14;3!DOID:127;1.62e-14;3!DOID:4430;2.07e-11;1!DOID:0060072;4.02e-11;4!DOID:5093;5.17e-11;4!DOID:1612;5.17e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.23e-14,3;DOID:127,1.23e-14,3;DOID:4430,2.18e-11,1;DOID:0060072,3.29e-11,4;DOID:5093,4.68e-11,4;DOID:1612,4.68e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0002780!2.03e-23!41;UBERON:0001890!2.03e-23!41;UBERON:0006240!2.03e-23!41;UBERON:0003080!1.07e-22!42;UBERON:0001049!7.40e-21!57;UBERON:0005068!7.40e-21!57;UBERON:0006241!7.40e-21!57;UBERON:0007135!7.40e-21!57;UBERON:0007023!4.08e-20!115;UBERON:0002616!7.04e-20!59;UBERON:0000955!6.14e-17!69;UBERON:0006238!6.14e-17!69;UBERON:0001893!1.43e-15!34;UBERON:0005743!2.01e-15!86;UBERON:0001017!2.56e-15!82;UBERON:0000073!3.28e-15!94;UBERON:0001016!3.28e-15!94;UBERON:0003056!6.63e-15!61;UBERON:0001869!6.65e-15!32;UBERON:0002791!1.72e-14!33;UBERON:0002346!2.05e-13!90;UBERON:0003075!2.45e-13!86;UBERON:0007284!2.45e-13!86;UBERON:0002020!3.01e-12!34;UBERON:0003528!3.01e-12!34;UBERON:0002420!2.46e-11!9;UBERON:0007245!2.46e-11!9;UBERON:0010009!2.46e-11!9;UBERON:0010011!2.46e-11!9;UBERON:0000454!2.46e-11!9;UBERON:0001894!8.08e-11!7;UBERON:0006222!8.08e-11!7;UBERON:0000369!1.32e-09!4;UBERON:0002435!1.32e-09!4;UBERON:0000204!1.32e-09!4;UBERON:0010082!1.32e-09!4;UBERON:0001950!1.03e-08!20;UBERON:0009663!5.28e-08!7;UBERON:0000956!5.95e-08!25;UBERON:0000203!5.95e-08!25;UBERON:0002619!9.49e-08!22;UBERON:0005383!1.03e-07!3;UBERON:0005382!1.03e-07!3;UBERON:0000033!1.39e-07!123;UBERON:0000153!1.79e-07!129;UBERON:0007811!1.79e-07!129;UBERON:0006947!2.85e-07!3;UBERON:0004054!2.85e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;1.36e-14;3!UBERON:0005382;1.36e-14;3!UBERON:0001301;8.62e-12;1!UBERON:0001874;9.57e-12;1!UBERON:0000369;3.54e-11;4!UBERON:0002435;3.54e-11;4!UBERON:0000204;3.54e-11;4!UBERON:0004175;6.40e-08;21!UBERON:0009663;9.51e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,1.73e-14,3;UBERON:0005382,1.73e-14,3;UBERON:0001301,8.62e-12,1;UBERON:0001874,9.57e-12,1;UBERON:0000369,4.23e-11,4;UBERON:0002435,4.23e-11,4;UBERON:0000204,4.23e-11,4;UBERON:0010082,4.23e-11,4;UBERON:0004175,5.28e-10,25;UBERON:0000995,7.40e-08,21;UBERON:0005795,1.66e-07,22;UBERON:0003975,1.66e-07,22;UBERON:0003133,3.87e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,1.60464117470104,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,2.22724939116194,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,0.251932747854276,0.715880777515084,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,2.17073589525734,0,0.110579259931225,0.295547618953547,0,0,0,1.30815439456455,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,0,0.889563386041866,0.370691816839509,0.313265848516366,0.337005664903385,0,0.468528891450678,0,0,0,0.394584402849391,0,0.30607276163049,0,0.60129367765797,0.103688191397247,0,0,0,0,0,0,0,0,0,11.0077800992479,0,0,0,0,0.0969890164884194,0,2.71176888936639,0,0,0,0,0,0,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0.684526894459965,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.364497339948148,0,0.236417121897595,0,0,0,0,0,0,0,0,3.45688596480507,2.93928624098468,0,0.328370082997356,0,0,0,0,0,0,0.171086837884329,0,0,0.157204305099666,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0.366078794705889,0,0,0,0.248385611765534,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,1.20984739010591,0,0,0,0,0,0.829412415681711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,1.23520578864389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0.215649622793364,0.157265941855896,0,0,0,0.247871528518004,0,0,0,4.80342448971282,0,0,0.834979926253974,0,0.159633859057151,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,2.18109952212846,0,0,0,0,0.147856086217045,0.135075169236789,0,0,0.126831620387814,0.546974809018219,0,0,0,0,0.535701835878287,0,1.21393120847326,0.455324382702595,1.77404740325278,0,0,0.135939465953663,0.197318320688547,0,0,0,5.65616123697607,0,0,0,0,0.428859265059938,0,0.929931402945002,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,2.35676547101626,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.535928260312357,0.829169439458779,0.930896962757057,0,0,0,0.0620747142958579,0,0,3.23387502333151,0,0,0,0,0,0,0,0,0.359300808426348,0,0.977931553462932,0.813792356631477,0,0,0 | |||
|short_description=p@chr2:100937476..100937484,+ | |||
}} |
Latest revision as of 22:39, 28 July 2015
Short description: | p@chr2:100937476..100937484, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:100937476..100937484, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.06e-11 | 1 |
peptide hormone secreting cell | 2.18e-11 | 1 |
enteroendocrine cell | 2.18e-11 | 1 |
type D enteroendocrine cell | 2.18e-11 | 1 |
somatostatin secreting cell | 2.18e-11 | 1 |
pancreatic D cell | 2.18e-11 | 1 |
progenitor cell of endocrine pancreas | 2.18e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 1.73e-14 | 3 |
dorsal striatum | 1.73e-14 | 3 |
epididymis | 8.62e-12 | 1 |
putamen | 9.57e-12 | 1 |
corpus striatum | 4.23e-11 | 4 |
striatum | 4.23e-11 | 4 |
ventral part of telencephalon | 4.23e-11 | 4 |
future corpus striatum | 4.23e-11 | 4 |
internal genitalia | 5.28e-10 | 25 |
uterus | 7.40e-08 | 21 |
embryonic uterus | 1.66e-07 | 22 |
internal female genitalia | 1.66e-07 | 22 |
reproductive organ | 3.87e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.23e-14 | 3 |
leiomyoma | 1.23e-14 | 3 |
somatostatinoma | 2.18e-11 | 1 |
benign neoplasm | 3.29e-11 | 4 |
thoracic cancer | 4.68e-11 | 4 |
breast cancer | 4.68e-11 | 4 |