FFCP PHASE1:Hg19::chr9:139111090..139111095,-: Difference between revisions
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|id=chr9:139111090..139111095,-
|short_description=p7@QSOX2
|description=CAGE_peak_7_at_QSOX2_5end
|association_with_transcript=-109bp_to_AK128750_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=169714 | |EntrezGene=169714 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=30249 | |HGNC=30249 | ||
|TSSclassifier=strong | |||
|UniProt=B3KY64 | |UniProt=B3KY64 | ||
|association_with_transcript=-109bp_to_AK128750_5end | |||
|cluster_id=chr9:139111090..139111095,- | |||
|coexpression_cluster_id=C87 | |||
|description=CAGE_peak_7_at_QSOX2_5end | |||
|id=chr9:139111090..139111095,- | |||
|ontology_enrichment_celltype=CL:0000242!9.40e-14!2;CL:0000095!1.70e-12!17;CL:0000123!1.70e-12!17;CL:0002319!5.43e-09!25;CL:0002327!2.04e-07!4;CL:0000243!7.87e-07!15;CL:0000125!7.87e-07!15;CL:0000030!7.87e-07!15;CL:0000339!7.87e-07!15 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.62e-23;3!UBERON:0006238;2.32e-07;10 | |||
|ontology_enrichment_disease=DOID:3093!2.66e-09!11;DOID:5093!2.04e-07!4;DOID:1612!2.04e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:3093;7.48e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,7.48e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.46e-50!2;UBERON:0002757!1.46e-50!2;UBERON:0010134!1.46e-50!2;UBERON:0002784!1.46e-50!2;UBERON:0005408!1.46e-50!2;UBERON:0001899!1.46e-50!2;UBERON:0003296!6.73e-26!4;UBERON:0010133!6.73e-26!4;UBERON:0000966!7.35e-21!5;UBERON:0005388!7.35e-21!5;UBERON:0001802!7.35e-21!5;UBERON:0001894!2.85e-15!7;UBERON:0006222!2.85e-15!7;UBERON:0005085!2.33e-08!29;UBERON:0001911!2.04e-07!4;UBERON:0005333!2.04e-07!4;UBERON:0008425!2.04e-07!4;UBERON:0005311!2.04e-07!4;UBERON:0005743!2.65e-07!86;UBERON:0004121!4.72e-07!169;UBERON:0000924!6.87e-07!173;UBERON:0006601!6.87e-07!173;UBERON:0003056!7.40e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.75e-130;2!UBERON:0002757;1.75e-130;2!UBERON:0010134;1.75e-130;2!UBERON:0005408;1.75e-130;2!UBERON:0001899;1.75e-130;2!UBERON:0003296;4.67e-66;4!UBERON:0010133;4.67e-66;4!UBERON:0002784;4.67e-66;4!UBERON:0001894;2.18e-38;7!UBERON:0000966;1.40e-14;5!UBERON:0005388;1.40e-14;5!UBERON:0001802;1.40e-14;5!UBERON:0002368;5.80e-08;33!UBERON:0000949;5.80e-08;43!UBERON:0000955;6.04e-08;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.75e-130,2;UBERON:0002757,1.75e-130,2;UBERON:0010134,1.75e-130,2;UBERON:0005408,1.75e-130,2;UBERON:0001899,1.75e-130,2;UBERON:0003296,4.67e-66,4;UBERON:0010133,4.67e-66,4;UBERON:0002784,4.67e-66,4;UBERON:0001894,2.18e-38,7;UBERON:0006222,2.18e-38,7;UBERON:0000966,2.19e-12,6;UBERON:0005388,2.19e-12,6;UBERON:0001802,2.19e-12,6;UBERON:0003056,1.22e-10,61;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0002368,1.18e-08,35;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89;UBERON:0002780,2.17e-07,41;UBERON:0001890,2.17e-07,41;UBERON:0003080,2.17e-07,41;UBERON:0006240,2.17e-07,41;UBERON:0000949,5.75e-07,45 | |||
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|short_description=p7@QSOX2 | |||
}} | }} |
Latest revision as of 11:38, 16 September 2015
Short description: | p7@QSOX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_QSOX2_5end |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | -109bp_to_AK128750_5end |
EntrezGene: | QSOX2 |
HGNC: | 30249 |
UniProt: | B3KY64 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.75e-130 | 2 |
regional part of epithalamus | 1.75e-130 | 2 |
secretory circumventricular organ | 1.75e-130 | 2 |
circumventricular organ | 1.75e-130 | 2 |
epithalamus | 1.75e-130 | 2 |
gland of diencephalon | 4.67e-66 | 4 |
neuroendocrine gland | 4.67e-66 | 4 |
regional part of diencephalon | 4.67e-66 | 4 |
diencephalon | 2.18e-38 | 7 |
future diencephalon | 2.18e-38 | 7 |
retina | 2.19e-12 | 6 |
photoreceptor array | 2.19e-12 | 6 |
posterior segment of eyeball | 2.19e-12 | 6 |
pre-chordal neural plate | 1.22e-10 | 61 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
endocrine gland | 1.18e-08 | 35 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |
regional part of forebrain | 2.17e-07 | 41 |
forebrain | 2.17e-07 | 41 |
anterior neural tube | 2.17e-07 | 41 |
future forebrain | 2.17e-07 | 41 |
endocrine system | 5.75e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 7.48e-07 | 11 |