FFCP PHASE1:Hg19::chr2:30143841..30143861,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=238 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=427 | |||
|TSSclassifier=strong | |||
|UniProt=E7EPW7 | |||
|association_with_transcript=-316bp_to_ENST00000431873_5end | |||
|cluster_id=chr2:30143841..30143861,- | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_4_at_ALK_5end | |||
|id=chr2:30143841..30143861,- | |||
|ontology_enrichment_celltype=CL:0002598!6.31e-10!1 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.48e-40;5!CL:0002321;1.22e-14;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!9.74e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:169;4.27e-34;6!DOID:171;3.81e-21;10!DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,4.27e-34,6;DOID:171,3.81e-21,10;DOID:3095,1.80e-10,22;DOID:2994,1.80e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0001869!4.77e-34!32;UBERON:0002791!5.45e-33!33;UBERON:0002020!5.43e-32!34;UBERON:0003528!5.43e-32!34;UBERON:0001893!5.43e-32!34;UBERON:0001950!1.46e-30!20;UBERON:0002619!8.47e-28!22;UBERON:0002780!2.46e-26!41;UBERON:0001890!2.46e-26!41;UBERON:0006240!2.46e-26!41;UBERON:0003080!1.12e-25!42;UBERON:0000073!1.06e-24!94;UBERON:0001016!1.06e-24!94;UBERON:0000956!1.89e-24!25;UBERON:0000203!1.89e-24!25;UBERON:0000200!2.18e-22!6;UBERON:0001049!8.64e-22!57;UBERON:0005068!8.64e-22!57;UBERON:0006241!8.64e-22!57;UBERON:0007135!8.64e-22!57;UBERON:0005743!2.92e-21!86;UBERON:0002616!5.45e-21!59;UBERON:0003056!2.90e-20!61;UBERON:0001017!1.45e-19!82;UBERON:0000369!2.15e-19!4;UBERON:0002435!2.15e-19!4;UBERON:0000204!2.15e-19!4;UBERON:0010082!2.15e-19!4;UBERON:0003075!1.05e-18!86;UBERON:0007284!1.05e-18!86;UBERON:0002346!9.08e-18!90;UBERON:0001870!1.04e-17!2;UBERON:0000955!2.14e-17!69;UBERON:0006238!2.14e-17!69;UBERON:0002420!4.79e-15!9;UBERON:0007245!4.79e-15!9;UBERON:0010009!4.79e-15!9;UBERON:0010011!4.79e-15!9;UBERON:0000454!4.79e-15!9;UBERON:0004121!3.02e-14!169;UBERON:0000924!7.54e-14!173;UBERON:0006601!7.54e-14!173;UBERON:0007023!1.69e-13!115;UBERON:0005383!3.19e-12!3;UBERON:0005382!3.19e-12!3;UBERON:0002771!7.78e-12!3;UBERON:0009663!2.49e-11!7;UBERON:0000033!1.80e-10!123;UBERON:0002702!4.09e-10!1;UBERON:0000153!7.01e-10!129;UBERON:0007811!7.01e-10!129;UBERON:0001871!8.58e-10!7;UBERON:0001874!1.06e-09!1;UBERON:0002581!1.36e-09!1;UBERON:0001882!1.48e-09!1;UBERON:0005403!1.48e-09!1;UBERON:0002902!2.26e-09!1;UBERON:0009899!2.26e-09!1;UBERON:0002308!6.33e-09!9;UBERON:0000125!6.33e-09!9;UBERON:0000013!6.30e-08!5;UBERON:0002410!6.30e-08!5;UBERON:0001872!1.08e-07!5;UBERON:0002021!1.61e-07!5;UBERON:0000349!1.61e-07!5;UBERON:0000064!8.19e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.48e-40;5!UBERON:0002410;1.48e-40;5!UBERON:0000010;2.62e-23;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.48e-40,5;UBERON:0002410,1.48e-40,5;UBERON:0000010,2.62e-23,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.8884367135264,0,0.764467467344097,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329821550236287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@ALK | |||
}} |
Latest revision as of 21:33, 16 September 2015
Short description: | p4@ALK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ALK_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | -316bp_to_ENST00000431873_5end |
EntrezGene: | ALK |
HGNC: | 427 |
UniProt: | E7EPW7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.48e-40 | 5 |
autonomic nervous system | 1.48e-40 | 5 |
peripheral nervous system | 2.62e-23 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.27e-34 | 6 |
neuroectodermal tumor | 3.81e-21 | 10 |
germ cell and embryonal cancer | 1.80e-10 | 22 |
germ cell cancer | 1.80e-10 | 22 |