FFCP PHASE1:Hg19::chr2:63815724..63815744,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51057 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28027 | |||
|TSSclassifier=strong | |||
|UniProt=F8WBT2 | |||
|association_with_transcript=-72bp_to_ENST00000409562,ENST00000409835,ENST00000417238_5end | |||
|cluster_id=chr2:63815724..63815744,- | |||
|description=CAGE_peak_8_at_WDPCP_5end | |||
|id=chr2:63815724..63815744,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000767;1.84e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,7.93e-13,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.71e-10!57;UBERON:0005068!8.71e-10!57;UBERON:0006241!8.71e-10!57;UBERON:0007135!8.71e-10!57;UBERON:0003075!1.12e-09!86;UBERON:0007284!1.12e-09!86;UBERON:0002346!1.83e-09!90;UBERON:0007023!3.51e-09!115;UBERON:0005743!1.67e-08!86;UBERON:0002780!2.17e-08!41;UBERON:0001890!2.17e-08!41;UBERON:0006240!2.17e-08!41;UBERON:0000073!5.85e-08!94;UBERON:0001016!5.85e-08!94;UBERON:0003080!7.39e-08!42;UBERON:0001893!8.84e-08!34;UBERON:0001017!9.63e-08!82;UBERON:0000955!1.01e-07!69;UBERON:0006238!1.01e-07!69;UBERON:0002020!1.01e-07!34;UBERON:0003528!1.01e-07!34;UBERON:0002616!1.07e-07!59;UBERON:0002791!2.50e-07!33;UBERON:0001869!9.27e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.98e-07;53!UBERON:0002616;1.98e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,3.19e-11,82;UBERON:0007284,3.19e-11,82;UBERON:0001049,1.25e-10,56;UBERON:0005068,1.25e-10,56;UBERON:0006241,1.25e-10,56;UBERON:0007135,1.25e-10,56;UBERON:0002346,1.62e-10,86;UBERON:0010371,2.84e-10,104;UBERON:0000073,1.05e-09,53;UBERON:0002616,1.05e-09,53;UBERON:0000955,4.13e-08,68;UBERON:0006238,4.13e-08,68;UBERON:0010314,4.13e-08,132;UBERON:0003056,4.87e-08,61;UBERON:0002780,1.17e-07,41;UBERON:0001890,1.17e-07,41;UBERON:0003080,1.17e-07,41;UBERON:0006240,1.17e-07,41;UBERON:0001017,1.81e-07,81 | |||
|phase1_expression=0,0.642301571672949,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.273748850145768,0.502170558379211,0.382067028739756,0.246301768349837,0.393553906568396,1.96682138424452,1.15148819429164,1.39334510984468,0,0,0,1.08454080812422,0.853015394924529,0.587200878669695,0,0.200544447470142,0.868043482863407,0.895661896959697,0.971680998056939,1.54545340580512,0.436194716338694,0.377875943688809,0.485168122375632,0.232429036905685,0.411167888021826,0.929119112685311,0.28769239232215,1.0246428261164,1.41889337933151,0.689491361473237,0,0,0.376484679085209,1.09162460023138,1.34834090667051,0,0.962787081228281,0,0.329851300186716,0.199463657621632,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0.736555271975129,0.949387162322653,0.422510572623884,0.212604299965044,0.209658645508376,0.44931452458598,0.450530678524519,0.48217676009124,0,0,0.365328307529268,0,0,0.889509253863555,0.853460445133014,0,0,0,0,0.569212969109448,0,2.29363936875137,0,2.24203425192614,0,0.590129310341499,0.393010762749165,0.411202997999018,0.501559486172034,0.651844533267181,0.473447805734733,1.94826728407911,0.334231370655521,0.294605907474837,0.443067789167242,0.541607727530031,0,0,0.164437904603676,0,0,0.296573126324121,0,0,0,0,1.03088233644789,0.506039384039006,0,0.651083453856419,0,0.301150238155546,0.255973222308837,0,0.710331756132051,0,0.80642697289893,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0.795285947051099,0,0.283604451492204,0.221729397462564,0.263504357079378,0.327447688744282,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0.476981248610684,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0.775250277507987,0.35576626268671,0,0,0,0,0.367663080345869,0.81014194788176,0,0,0,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0.529636723252875,0.573673241497627,0,0,1.06748995729705,0.24666754841716,0,0.269421344139376,0.326923806226917,0,0,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0.323745888736263,0.140450806702248,0.408308342509787,0,0.206651562351531,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0,0.340296549480063,0.179389635688862,0.427114777637135,0.423863802319124,0,0,0.257640540045629,0,0,0,0.252433774244115,0.184099797284599,0,0.355009592516614,0.10075209822764,0,0,0,0,0.243947412259191,0.132529768321485,0.348581828608555,0.414644220061482,0,0,0,0,0,0,0,0.236613600079688,0.505754070234305,0,0.220587945464788,0.217879444092406,0,0.269662616320329,0,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0.171567810298526,0.109750285408626,1.1240175325762,0,0.555530670951178,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0,0.190254152234598,0,0,0.984868024349589,0.468008530278475,0.743155811443641,0,0.335964256397719,0.283550194484773,0,0,0,0,0.264145302039678,0.621984346622316,0.720599767084807,0.12624243342638,0.317489471460845,0,0,0,0.514137463516618,0.600686115687835,0,0.560655421726804,0,0.07333828582095,0.387815147273333,0,0,0.531876233169741,0,0,0,0.532844358032199,0.428933980974443,0.542621605391443,0,0,0,0,0,0,0.499864955910285,0,0.502257091432126,2.10833939483032,0.239624855491583,2.29723871668228,0,0.289562613335158,0,0,0.448340575974109,1.18218456121156,0.431255149719035,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0,0.173767228936166,0,0.343143423810856,0.413536052245775,0.647142602455851,0.426910231213777,0.303127571446259,0,0,0.496215615637554,0.306923946576125,0.280660094433074,0,0,0.160853921143607,0,0,0,0.164254312027618,0,0,0.604297247958111,0,0,0.229628896329213,0.182091168006717,0,0,0.231046011313244,0,0,0,0,0.170093705276516,0.431831832204279,0,0,0,0.254876273045038,0,0,0.438519753291869,0,0.512900250232778,0.328014645699706,0.325378394664303,0.412164046590889,0.27470839445503,0.165018999841176,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.551346289938122,0,0.145016693914229,0.0852266274161009,0,0,0,0.893288987462089,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.953150969619124,0,0,0,0,0.719489830333259,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0.573645408816206,0.196498082026242,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0.188287601553558,0,0,0,0,0,0.764637207142375,0,0,0,0.648473311192717,0,0,0.213648142254946,0.962479855263359,0.245040215981032,0,0,0.284567373393656,0.318852545457645,0.399158742865633,0,0.846694330895531,0,0.280797178113459,0.456469358066384,0,0,0.169291777801603,0.321176150207399,0.201799707191048,0,0.687010689511529,0.614481528616916,0.671028323677248,0.834245708559542,0.976940477010201,0.278406173895242,0,0.540911356951966,0.33307196799782,0,0.18714054040822,0.439524537815682,0.36408156524854,0.445773537109913,0.852408440419239,0,0,0.307160702099232,0.994147647766298,0.703347082052564,0,0,0,0.398495976502139,0,0,0.102268682502155,0.492339221844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| |||
|short_description=p8@WDPCP | |||
}} |
Latest revision as of 22:31, 17 September 2015
Short description: | p8@WDPCP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_WDPCP_5end |
Coexpression cluster: | NA |
Association with transcript: | -72bp_to_ENST00000409562, ENST00000409835, ENST00000417238_5end |
EntrezGene: | WDPCP |
HGNC: | 28027 |
UniProt: | F8WBT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 7.93e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
neural plate | 3.19e-11 | 82 |
presumptive neural plate | 3.19e-11 | 82 |
neural tube | 1.25e-10 | 56 |
neural rod | 1.25e-10 | 56 |
future spinal cord | 1.25e-10 | 56 |
neural keel | 1.25e-10 | 56 |
neurectoderm | 1.62e-10 | 86 |
ecto-epithelium | 2.84e-10 | 104 |
regional part of nervous system | 1.05e-09 | 53 |
regional part of brain | 1.05e-09 | 53 |
brain | 4.13e-08 | 68 |
future brain | 4.13e-08 | 68 |
structure with developmental contribution from neural crest | 4.13e-08 | 132 |
pre-chordal neural plate | 4.87e-08 | 61 |
regional part of forebrain | 1.17e-07 | 41 |
forebrain | 1.17e-07 | 41 |
anterior neural tube | 1.17e-07 | 41 |
future forebrain | 1.17e-07 | 41 |
central nervous system | 1.81e-07 | 81 |