FFCP PHASE1:Hg19::chr2:78768976..78769030,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=156bp_to_uc002snv.3_5end | |||
|cluster_id=chr2:78768976..78769030,- | |||
|coexpression_cluster_id=C1914 | |||
|description=CAGE_peak_1_at_uc002snv.3_5end | |||
|id=chr2:78768976..78769030,- | |||
|ontology_enrichment_celltype=CL:0000066!1.18e-10!254;CL:0002322!1.73e-07!5;CL:0000039!5.59e-07!7;CL:0000586!5.59e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.74e-10;5!CL:0000039;9.27e-10;7!CL:0000586;9.27e-10;7!CL:0000182;2.89e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.19e-10,253;CL:0002322,2.80e-10,5;CL:0000039,9.06e-10,7;CL:0000586,9.06e-10,7;CL:0000182,2.86e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.80e-08;11 | |||
|ontology_enrichment_disease=DOID:14566!8.66e-25!239;DOID:305!3.13e-24!106;DOID:162!3.56e-24!235;DOID:0050687!1.96e-22!143;DOID:0050686!3.17e-09!137;DOID:299!3.98e-08!25;DOID:7!2.81e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:305;3.41e-11;106!DOID:299;6.26e-10;25!DOID:0050687;3.90e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,4.14e-33,239;DOID:162,5.99e-32,235;DOID:305,1.45e-28,106;DOID:0050687,1.69e-27,143;DOID:0050686,2.60e-11,137;DOID:299,6.21e-10,25;DOID:7,3.85e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0005409!8.33e-07!35 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,2.29240217243854,1.72411237844886,1.57421562627358,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0.735326160691737,0,0.17859945656816,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.1284273653235,41.7468770212679,32.3019161177261,31.2019775596265,36.5865233769661,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.4723752852041,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,1.58040879591855,4.29243081047436,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,62.7260543380519,0,0.460404944679482,0,0,0,0,0.0770153371044148,0,0,0.73886140225013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0.366277859273374,0.577566499444116,0,2.60024098414608,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0.31481234683064,0,0,1.06461206063404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.523860734179,26.5698540429778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.6635237860649,0,0,0,0,9.187403738543,0,0,0,0,2.61996756571508,0,0,2.00598091699461,0,4.05865624054073,0,0,0,0,0,0,0,0,1.10513566212459,0,0.306806047506464,0.369254416383208,0,0,0,0,0,0,46.6775358607475,0,0,0,0.260427761085233,0,0,0.455173793141999,0,0,0.344743373241465,0,0,0,0,0,0,0,0,17.7569695535954,11.8510182636813,0,5.92498690404406,1.61394733071642,11.1299479068117,0,6.69902435437031,0,1.06606955203727,0,0,0,26.8458836134445,25.8802545299416,31.3826367644826,25.9962613832134,0,5.06395354867265,67.5783825778872,71.2419480027062,0.216388639742091,0.995261931078505,0.353830258013357,1.83309043480088,0,0,0,0,0,0,0,0.19566461893209,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,1.8027707491708,0,2.35181753794506,14.4518282923468,0.52418000472609,7.56738542875113,4.64430390187609,5.84714536689484,4.76269650908614,0.193978032976839,0,0,14.2523601632621,19.871461170299,0,52.0166678074576,100.839795876429,0,22.978105101945,0,0,44.0999144505249,0,0.248505071130865,0,20.7933435292629,20.8159664161543,0,2.02265412931063,0,0,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0.199679000498991,0,0,0.335917362433631,0,26.7940683913144,62.3174972050139,57.93834844196,69.9648785206439,11.8112977817699,0.254019996197353,0,0,0,9.3526816886119,10.3860084507296,0,0,0,37.9041196987171,0.0788057072991982,0,0,0.896436696664224,0,0,0,0,0,0,0,2.39460383124975,0.246277562248017,0,0,0,0,0,0,0.342173675768659,21.1444506695002,0,0,0,0,0.395223263795889,0,1.91502377331055,0,0,0,0,67.2191531951003,0,0,0,0,0,0,0.138348634936231,32.3699256621856,0,0,2.82318983637806,0,10.8690771458119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17388295717181,2.08370226891451,0,0,0,0.438568099157414,0.176689145945881,0,0,0,0,0,0,0.389720617678777,0,0,0,45.2222152106844,0,0,0,21.1824424982803,13.6203828856041,9.0211915623402,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,100.071343535684,0,0,0,0,0,0,0,0,0,0,52.7053248350508,0.11796972334774,0,0,6.10211352747467,0,0,0,20.3722119390555,0.781514011233092,81.191075289241,14.2481568233784,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91064876540519,1.24183318227694,0,35.4980179535456,0,0,16.5471377237555,0.333694205676207,0.235479278551542,0,12.6122473491205,0,8.20524846630761,0,0.142953088353313,0,23.1320436482569,0,0,0,0,0,0,13.608180084015,16.3609737137583,0,0,0,0,20.8051103143894,65.6625062885975,111.676819283759,0,0,0,0,0,0,0,0.11294608203896,0,2.41540549706678,1.15761237161917,1.74847648403166,83.2461614559896,0,0,0,0,0.4226557275834,0,0.187967835959707,0,6.19635166734559,68.2076045473612,36.3481717867163,0,0,0,0,0,0,0.436350690340377,1.5870805215462,0,0,0,3.53265989538221,20.5419275291748,49.285716893449,38.1438223235012,72.4159168269669,56.7910479125342,49.3893852405979,0.227336094654718,0.267964130156178,0,0,0,0,0,0.186224142887574,20.8565264399941,0.318235791390825,0,1.08858373948481,0,0.0673520530145875,6.3832762799482,0,14.3269752755315,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p1@uc002snv.3 | |||
}} |
Latest revision as of 12:29, 29 July 2015
Short description: | p1@uc002snv.3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc002snv.3_5end |
Coexpression cluster: | C1914_signet_nonsmall_gall_pancreatic_smallcell_hepatocellular_colon |
Association with transcript: | 156bp_to_uc002snv.3_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.19e-10 | 253 |
embryonic stem cell | 2.80e-10 | 5 |
germ line cell | 9.06e-10 | 7 |
germ cell | 9.06e-10 | 7 |
hepatocyte | 2.86e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.14e-33 | 239 |
cancer | 5.99e-32 | 235 |
carcinoma | 1.45e-28 | 106 |
cell type cancer | 1.69e-27 | 143 |
organ system cancer | 2.60e-11 | 137 |
adenocarcinoma | 6.21e-10 | 25 |
disease of anatomical entity | 3.85e-07 | 39 |