FFCP PHASE1:Mm9::chr11:60745328..60745355,-: Difference between revisions
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{{FFCP|EntrezGene=24082|HGNC=|UniProt=|association_with_transcript=13bp_to_ENSMUST00000123544,NR_027800,uc007jgv.1_5end|description=CAGE_peak_2_at_Gm16516_5end|id=chr11:60745328..60745355,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000682,7.81e-07,3;CL:0000893,9.99e-07,6;CL:0002489,9.99e-07,6;CL:0000898,9.99e-07,6;CL:0000809,9.99e-07,6;CL:0000810,9.99e-07,6;CL:0000895,9.99e-07,6;CL:0000808,9.99e-07,6;CL:0000894,9.99e-07,6;CL:0000806,9.99e-07,6;CL:0000807,9.99e-07,6;CL:0000805,9.99e-07,6;CL:0002425,9.99e-07,6;CL:0002436,9.99e-07,6;CL:0002427,9.99e-07,6;CL:0002428,9.99e-07,6;CL:0002429,9.99e-07,6;CL:0002433,9.99e-07,6;CL:0002431,9.99e-07,6;CL:0002432,9.99e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0.697950815278722,2.72999543633722,0.30246421130683,0.500895729946347,1.51091344720701,1.86890112476421,0.129123323441576,5.77233760821834,5.14941957908386,11.6428218393343,9.6524312384357,0,0.0874204024189974,0,0,0,0,0,0,0.680346321208558,0.0992909512008853,0,0.639969691173627,0.68822784320151,1.72269589234506,2.58457197695445,1.07735616342945,0.190023419456374,0.252030129759931,1.33038306393183,0,1.23012957516914,0,0.288851619751275,0.166234645358492,0.408338712524738,0.837063261473815,0,1.0470474879476,1.17646297606203,0,0,0.377690453926732,0.506884656097573,0.183546752161682,0.782391344348039,0.65407546914134,1.5378032791413,1.55543919259427,0.279972843250725,1.43752564364972,0.167782606057736,0.725362142011344,0,0,0.573066879877513,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,0.899899717281399,0,0,0.299600110518405,0,0.103689612308478,0.270011876663381,0,0.285650984403804,0,0.122490799214954,0,0,0,0,0.153606533256243,0.131886287730194,0.274462930807229,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0.372798891650601,3.25622631332691,0.755715601067855,0.869593466105033,0,10.1995700056163,0,0,0.448026887097336,1.40444420131752,1.02258193546835,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0.760079596425296,0,0.45673551887624,0.258937883647172,0.445326417194474,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0.628332956648377,0.247194967734374,1.01219549843938,0,0.161766849947409,0.662524555381181,1.45462575940567,0,0,0,0.510914110417183,1.91704199209472,0.599902730993408,2.03312363316904,0,0,0.125654352112864,0,0,0,0.162241263067758,0.305518091550949,0.746441823660558,0.252722758433675,0.210441855886474,0.260240885925407,0,0.180062129805349,0,0.0680364991513279,0,0.187403449119458,0.517406741478031,0,0.189106080167819,0.351902248327898,0.43839146485515,0.278047249225598,0,0.61734640922383,0.199034266818493,1.40442637462647,0.772043721344145,0.852490498186778,0.828503090142008,0.234526059981096,0.180062061461015,0.710234206755631,0.787056926989615,0,0.697601834251224,0.804820204198858,0.817357396570186,0.822799249567402,0.656669856316381,1.54030738137126,2.19299981137998,1.53685080703735,1.34206418760372,0,0.102904612379284,0.991256348951394,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.329397909448022,0.251335208800269,0,0.19496408711912,0.898819408654221,0.432276099749388,0.398282546508734,0.379335801906163,0,0,0.203651327845314,0.193952487167626,0.210407459670956,0.0632365371242573,0.147610147979602,0.31399745568275,0.370191491765402,0.592905254174298,0.667380422864376,0.589676985339609,0.224862112384854,0,0.241177159752417,0.50925170356284,0,0.162135226775035,0.274561413188081,1.43768206527355,0,0,0,0.179397413521912,0,0.369506380333209,0.189491411770485,0,0.509235257325564,0,0.167506257441816,1.19021820443007,0.195133647857799,0.157635144106191,0.664394068946325,0,0.491589944147214,1.03610989119537,0.433947175744535,0,0,0,0.275936746304732,0,0.117211686592203,0.327869890753351,2.7771801992481,0,0,0.430846795465598,0.238968797952552,0.222798674082394,0.566153061577665,0,0,0,0,0,0,0.162886959353576,0,0,0.485561272309963,1.209294227859,1.50884063804718,1.47650946440386,0.922305443831782,0.516856586336442,0.363533729477506,1.06949213515416,0.948110273807448,0,0,0.340439605753788,0,0.129358683782755,0,0.354680467284547,0,0.164549020602121,0.304464949114599,1.17335854031855,0.42366414172764,0.220528398054962,0.65954501176592,0.161464426695906,0.542816324353403,0.358117032009409,0.328281799490123,0.291480836629851,0.18542530201051,0.341741761595705,0.82554747185289,0,0,0.136694227721025,0.915112692826091,2.54967644990783,4.05859211738608,2.48759952847963,0.954670618015114,0.316335993581135,0,0.432021363287205,0.418176592028937,0,0,0.330613822901344,0,0.259229946583586,0,0.56369293868419,0.149516546043979,0.330916980914195,0.194451188344048,0.387479470433193,0.337912250981556,0,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0,0.129920822977795,0,0,0.240390899039938,0.147689527174577,0,0,0.100826185136841,0,0.0962118416403295,0,1.3603823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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=24082 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=13bp_to_ENSMUST00000123544,NR_027800,uc007jgv.1_5end | |||
|cluster_id=chr11:60745328..60745355,- | |||
|description=CAGE_peak_2_at_Gm16516_5end | |||
|id=chr11:60745328..60745355,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,7.81e-07,3;CL:0000893,9.99e-07,6;CL:0002489,9.99e-07,6;CL:0000898,9.99e-07,6;CL:0000809,9.99e-07,6;CL:0000810,9.99e-07,6;CL:0000895,9.99e-07,6;CL:0000808,9.99e-07,6;CL:0000894,9.99e-07,6;CL:0000806,9.99e-07,6;CL:0000807,9.99e-07,6;CL:0000805,9.99e-07,6;CL:0002425,9.99e-07,6;CL:0002436,9.99e-07,6;CL:0002427,9.99e-07,6;CL:0002428,9.99e-07,6;CL:0002429,9.99e-07,6;CL:0002433,9.99e-07,6;CL:0002431,9.99e-07,6;CL:0002432,9.99e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.697950815278722,2.72999543633722,0.30246421130683,0.500895729946347,1.51091344720701,1.86890112476421,0.129123323441576,5.77233760821834,5.14941957908386,11.6428218393343,9.6524312384357,0,0.0874204024189974,0,0,0,0,0,0,0.680346321208558,0.0992909512008853,0,0.639969691173627,0.68822784320151,1.72269589234506,2.58457197695445,1.07735616342945,0.190023419456374,0.252030129759931,1.33038306393183,0,1.23012957516914,0,0.288851619751275,0.166234645358492,0.408338712524738,0.837063261473815,0,1.0470474879476,1.17646297606203,0,0,0.377690453926732,0.506884656097573,0.183546752161682,0.782391344348039,0.65407546914134,1.5378032791413,1.55543919259427,0.279972843250725,1.43752564364972,0.167782606057736,0.725362142011344,0,0,0.573066879877513,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,0.899899717281399,0,0,0.299600110518405,0,0.103689612308478,0.270011876663381,0,0.285650984403804,0,0.122490799214954,0,0,0,0,0.153606533256243,0.131886287730194,0.274462930807229,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0.372798891650601,3.25622631332691,0.755715601067855,0.869593466105033,0,10.1995700056163,0,0,0.448026887097336,1.40444420131752,1.02258193546835,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0.760079596425296,0,0.45673551887624,0.258937883647172,0.445326417194474,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0.628332956648377,0.247194967734374,1.01219549843938,0,0.161766849947409,0.662524555381181,1.45462575940567,0,0,0,0.510914110417183,1.91704199209472,0.599902730993408,2.03312363316904,0,0,0.125654352112864,0,0,0,0.162241263067758,0.305518091550949,0.746441823660558,0.252722758433675,0.210441855886474,0.260240885925407,0,0.180062129805349,0,0.0680364991513279,0,0.187403449119458,0.517406741478031,0,0.189106080167819,0.351902248327898,0.43839146485515,0.278047249225598,0,0.61734640922383,0.199034266818493,1.40442637462647,0.772043721344145,0.852490498186778,0.828503090142008,0.234526059981096,0.180062061461015,0.710234206755631,0.787056926989615,0,0.697601834251224,0.804820204198858,0.817357396570186,0.822799249567402,0.656669856316381,1.54030738137126,2.19299981137998,1.53685080703735,1.34206418760372,0,0.102904612379284,0.991256348951394,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.329397909448022,0.251335208800269,0,0.19496408711912,0.898819408654221,0.432276099749388,0.398282546508734,0.379335801906163,0,0,0.203651327845314,0.193952487167626,0.210407459670956,0.0632365371242573,0.147610147979602,0.31399745568275,0.370191491765402,0.592905254174298,0.667380422864376,0.589676985339609,0.224862112384854,0,0.241177159752417,0.50925170356284,0,0.162135226775035,0.274561413188081,1.43768206527355,0,0,0,0.179397413521912,0,0.369506380333209,0.189491411770485,0,0.509235257325564,0,0.167506257441816,1.19021820443007,0.195133647857799,0.157635144106191,0.664394068946325,0,0.491589944147214,1.03610989119537,0.433947175744535,0,0,0,0.275936746304732,0,0.117211686592203,0.327869890753351,2.7771801992481,0,0,0.430846795465598,0.238968797952552,0.222798674082394,0.566153061577665,0,0,0,0,0,0,0.162886959353576,0,0,0.485561272309963,1.209294227859,1.50884063804718,1.47650946440386,0.922305443831782,0.516856586336442,0.363533729477506,1.06949213515416,0.948110273807448,0,0,0.340439605753788,0,0.129358683782755,0,0.354680467284547,0,0.164549020602121,0.304464949114599,1.17335854031855,0.42366414172764,0.220528398054962,0.65954501176592,0.161464426695906,0.542816324353403,0.358117032009409,0.328281799490123,0.291480836629851,0.18542530201051,0.341741761595705,0.82554747185289,0,0,0.136694227721025,0.915112692826091,2.54967644990783,4.05859211738608,2.48759952847963,0.954670618015114,0.316335993581135,0,0.432021363287205,0.418176592028937,0,0,0.330613822901344,0,0.259229946583586,0,0.56369293868419,0.149516546043979,0.330916980914195,0.194451188344048,0.387479470433193,0.337912250981556,0,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0,0.129920822977795,0,0,0.240390899039938,0.147689527174577,0,0,0.100826185136841,0,0.0962118416403295,0,1.36038230169127,0.221985953374065,0.986852422704233,0.335769232728157,0.19318959403219,0,0.183151624267265,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.628839487883947,0,0,0,0.320919209591815,0.505394423527595,0.25347929989024,0.377252682772152,0.561849044819294,0.192075457214608,0.34461281373368,0.952587382566147,0.115884325944855,0.578727661391115,0,0,0.342869252385415,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0.592302255241736,0,0.526139422875686,0.271608227691724,0,0.118635018124174,0.394017929502254,0.818462086339379,0.464810523557898,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0,1.10295709559758,1.15933917810211 | |||
|short_description=p2@Gm16516 | |||
}} |
Latest revision as of 20:16, 1 October 2015
Short description: | p2@Gm16516 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm16516_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENSMUST00000123544, NR_027800, uc007jgv.1_5end |
EntrezGene: | Gm16516 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 7.81e-07 | 3 |
thymocyte | 9.99e-07 | 6 |
double negative thymocyte | 9.99e-07 | 6 |
naive T cell | 9.99e-07 | 6 |
double-positive, alpha-beta thymocyte | 9.99e-07 | 6 |
CD4-positive, alpha-beta thymocyte | 9.99e-07 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 9.99e-07 | 6 |
DN4 thymocyte | 9.99e-07 | 6 |
DN1 thymic pro-T cell | 9.99e-07 | 6 |
DN2 thymocyte | 9.99e-07 | 6 |
DN3 thymocyte | 9.99e-07 | 6 |
immature single positive thymocyte | 9.99e-07 | 6 |
early T lineage precursor | 9.99e-07 | 6 |
mature CD4 single-positive thymocyte | 9.99e-07 | 6 |
resting double-positive thymocyte | 9.99e-07 | 6 |
double-positive blast | 9.99e-07 | 6 |
CD69-positive double-positive thymocyte | 9.99e-07 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 9.99e-07 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 9.99e-07 | 6 |
CD24-positive, CD4 single-positive thymocyte | 9.99e-07 | 6 |