FFCP PHASE1:Hg19::chr3:9464797..9464819,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55209 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25566 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-75bp_to_ENST00000468208_5end | |||
|cluster_id=chr3:9464797..9464819,+ | |||
|description=CAGE_peak_15_at_SETD5_5end | |||
|id=chr3:9464797..9464819,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.54e-21!254;CL:0000223!1.49e-20!59;CL:0002076!2.59e-19!43;CL:0002368!7.21e-14!13;CL:0002202!7.76e-08!9;CL:0002632!7.76e-08!9;CL:0000076!2.82e-07!62;CL:0002328!6.79e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002178;7.82e-16;3!CL:0000307;1.64e-15;3!CL:0002368;8.95e-14;13!CL:1001319;7.02e-13;1!CL:1000600;7.02e-13;1!CL:0002202;1.31e-11;9!CL:0002632;1.31e-11;9!CL:0002076;1.55e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,9.80e-16,3;CL:0000068,2.05e-15,3;CL:0000069,2.05e-15,3;CL:0000307,2.05e-15,3;CL:0000377,2.05e-15,3;CL:0002368,9.11e-14,13;CL:1001319,7.03e-13,1;CL:1000600,7.03e-13,1;CL:0002076,2.94e-12,42;CL:0002202,1.41e-11,9;CL:0002632,1.41e-11,9;CL:0000066,5.05e-09,253;CL:0000223,1.07e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000377;1.64e-15;3 | |||
|ontology_enrichment_disease=DOID:0050687!7.75e-22!143;DOID:305!6.26e-20!106;DOID:162!4.45e-14!235;DOID:14566!1.92e-13!239;DOID:1749!1.42e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:0050619;9.36e-13;1!DOID:1357;9.36e-13;1!DOID:5409;2.84e-12;4!DOID:3119;1.10e-07;14!DOID:1325;2.19e-07;7!DOID:3904;2.19e-07;7!DOID:3493;5.26e-07;2!DOID:0050615;6.28e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.11e-12,1;DOID:1357,1.11e-12,1;DOID:5409,2.76e-12,4;DOID:3119,1.06e-07,14;DOID:1325,2.15e-07,7;DOID:3904,2.15e-07,7;DOID:305,2.29e-07,106;DOID:3493,4.83e-07,2;DOID:0050615,6.41e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.60e-15!169;UBERON:0000925!6.60e-15!169;UBERON:0006595!6.60e-15!169;UBERON:0001007!5.57e-12!155;UBERON:0001555!5.57e-12!155;UBERON:0007026!5.57e-12!155;UBERON:0004921!1.54e-11!129;UBERON:0004185!1.54e-11!129;UBERON:0001041!1.81e-11!98;UBERON:0000077!5.91e-11!130;UBERON:0001004!5.76e-10!72;UBERON:0000344!2.60e-08!12;UBERON:0000065!3.51e-08!53;UBERON:0004815!6.79e-07!3;UBERON:0002031!6.79e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;7.02e-13;1!UBERON:0001256;7.02e-13;1!UBERON:0001259;7.02e-13;1!UBERON:0001764;9.36e-13;1!UBERON:0001825;9.36e-13;1!UBERON:0000945;7.11e-10;5!UBERON:0010039;7.11e-10;5!UBERON:0005181;1.13e-07;35!UBERON:0005178;1.95e-07;34!UBERON:0002224;1.95e-07;34!UBERON:0000072;3.31e-07;37!UBERON:0007196;3.58e-07;15!UBERON:0001558;3.58e-07;15!UBERON:0003126;3.67e-07;7!UBERON:0001005;3.67e-07;7!UBERON:0000065;4.10e-07;44!UBERON:0001255;4.55e-07;2!UBERON:0001556;4.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,7.03e-13,1;UBERON:0001256,7.03e-13,1;UBERON:0001259,7.03e-13,1;UBERON:0001764,1.11e-12,1;UBERON:0001825,1.11e-12,1;UBERON:0004119,3.08e-08,160;UBERON:0000925,3.08e-08,160;UBERON:0006595,3.08e-08,160;UBERON:0005178,4.33e-08,34;UBERON:0002224,4.33e-08,34;UBERON:0004921,5.01e-08,118;UBERON:0005181,7.44e-08,35;UBERON:0001041,2.93e-07,87;UBERON:0008947,3.18e-07,38;UBERON:0003258,3.18e-07,38;UBERON:0007196,3.74e-07,15;UBERON:0001558,3.74e-07,15;UBERON:0003126,4.04e-07,7;UBERON:0001005,4.04e-07,7;UBERON:0001255,4.56e-07,2;UBERON:0001556,4.56e-07,2;UBERON:0000065,5.17e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0.919421224478927,0.30120591877825,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0.402829317109147,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0,0,0,0,0.53735113621709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40699659062816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,1.4875642382488,0.576570202095319,0.127612712494584,0.708104465988849,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44333169088268,0,1.08890984861323,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,1.79021174675609,0,0,0,0,0,0,0,0.260427761085233,0,0,0.227586896570999,0.508507300585533,0,0,0,0,0,0,0,0.110579259931225,0,0,0.10893846351899,0.557694977114413,0,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.782658475728359,0.242780379534093,0,0,0,0.063186579628488,2.1045278718029,0,0,0,0,0,0.284609546029793,0.277349346026277,0.347119476670262,0,0.174118413160805,0,0,0,0.292357268344742,0,0,0,0,0.274083849293502,0,0,0.195551382734803,0,0,0,1.00863292007874,0.114536596165916,0,0.288109595976299,0,1.41416420770077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.404421263125109,0.393709926058995,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,3.29813602125492,0,0,0,0,0,0,0.691743174681154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0.226705925512272,0,0,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0.344429959321631,0,0,0.699397538597222,1.24415452006595,0.127894371303652,0.107824811396682,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0.490738592505128,0.235939446695481,0,0.346576998451015,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0.548257766857182,0,0,0.255524855279191,0,0,0,0.227662191351298,0,0,0,0,0,0,0.111231401892069,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0.22910686854405,0,0,0,3.72970887737923,0.365753774946808,0,0,0,0,0.233939463462106,0,0,2.48481380485712,0,3.62310824560016,0.0771741581079447,0,1.88126918544609,0,0.235676547101626,0,0,0,0.169927114687817,0,0,0,0.535661815816973,0,0.401206833445841,0,0.458729283404541,0,0.157771562193185,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0.25458863311266,0,0,0.342233301085281,0.0673520530145875,0,0.332660356546013,6.18664841443406,0,0,0,0,0,0,0,0,0 | |||
|short_description=p15@SETD5 | |||
}} |
Latest revision as of 20:18, 19 September 2015
Short description: | p15@SETD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_SETD5_5end |
Coexpression cluster: | NA |
Association with transcript: | -75bp_to_ENST00000468208_5end |
EntrezGene: | SETD5 |
HGNC: | 25566 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 9.80e-16 | 3 |
duct epithelial cell | 2.05e-15 | 3 |
branched duct epithelial cell | 2.05e-15 | 3 |
tracheal epithelial cell | 2.05e-15 | 3 |
tracheoblast | 2.05e-15 | 3 |
respiratory epithelial cell | 9.11e-14 | 13 |
bladder cell | 7.03e-13 | 1 |
lower urinary tract cell | 7.03e-13 | 1 |
endo-epithelial cell | 2.94e-12 | 42 |
epithelial cell of tracheobronchial tree | 1.41e-11 | 9 |
epithelial cell of lower respiratory tract | 1.41e-11 | 9 |
epithelial cell | 5.05e-09 | 253 |
endodermal cell | 1.07e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 7.03e-13 | 1 |
wall of urinary bladder | 7.03e-13 | 1 |
mucosa of urinary bladder | 7.03e-13 | 1 |
maxillary sinus | 1.11e-12 | 1 |
paranasal sinus | 1.11e-12 | 1 |
endoderm-derived structure | 3.08e-08 | 160 |
endoderm | 3.08e-08 | 160 |
presumptive endoderm | 3.08e-08 | 160 |
thoracic cavity element | 4.33e-08 | 34 |
thoracic cavity | 4.33e-08 | 34 |
subdivision of digestive tract | 5.01e-08 | 118 |
thoracic segment organ | 7.44e-08 | 35 |
foregut | 2.93e-07 | 87 |
respiratory primordium | 3.18e-07 | 38 |
endoderm of foregut | 3.18e-07 | 38 |
tracheobronchial tree | 3.74e-07 | 15 |
lower respiratory tract | 3.74e-07 | 15 |
trachea | 4.04e-07 | 7 |
respiratory airway | 4.04e-07 | 7 |
urinary bladder | 4.56e-07 | 2 |
lower urinary tract | 4.56e-07 | 2 |
respiratory tract | 5.17e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.11e-12 | 1 |
maxillary sinus cancer | 1.11e-12 | 1 |
lung small cell carcinoma | 2.76e-12 | 4 |
gastrointestinal system cancer | 1.06e-07 | 14 |
bronchus cancer | 2.15e-07 | 7 |
bronchogenic carcinoma | 2.15e-07 | 7 |
carcinoma | 2.29e-07 | 106 |
signet ring cell adenocarcinoma | 4.83e-07 | 2 |
respiratory system cancer | 6.41e-07 | 16 |