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FFCP PHASE1:Mm9::chr15:88906488..88906535,+: Difference between revisions

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{{FFCP|EntrezGene=67976|HGNC=|MCL_coexpression_id=700|UniProt=E9PXM1,E9Q8R5,Q99JY4|association_with_transcript=0bp_to_ENSMUST00000169870,ENSMUST00000169891,NM_026485,uc007xfc.1,uc007xfd.1,uc011zxr.1_5end|description=CAGE_peak_1_at_Trabd_5end|id=chr15:88906488..88906535,+|ontology_enrichment_celltype=CL:0000066!9.81e-08!25;CL:0000223!4.11e-07!20|ontology_enrichment_celltype_v019_2=CL:0000066,9.81e-08,25;CL:0000223,4.11e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.04e-13!43;UBERON:0005409!8.67e-13!59;UBERON:0004119!3.49e-10!130;UBERON:0000925!3.49e-10!130;UBERON:0006595!3.49e-10!130;UBERON:0001007!1.01e-09!128;UBERON:0001555!1.01e-09!128;UBERON:0007026!1.01e-09!128;UBERON:0000344!3.01e-09!15;UBERON:0004921!5.14e-09!126;UBERON:0004185!5.14e-09!126;UBERON:0001242!2.34e-08!13;UBERON:0000060!2.34e-08!13;UBERON:0001262!2.34e-08!13;UBERON:0004786!2.34e-08!13;UBERON:0002108!6.37e-08!16|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.01e-09,15;UBERON:0002100,8.88e-09,90;UBERON:0000160,1.10e-08,31;UBERON:0001242,2.34e-08,13;UBERON:0001262,2.34e-08,13;UBERON:0004786,2.34e-08,13;UBERON:0005409,2.74e-08,47|phase1_expression=8.48788889655408,63.1645487827244,54.1449094873548,60.492842261366,75.1343594919521,45.663161960034,38.0788604170707,9.68424925811822,9.43284438416167,9.36258105287974,5.99262888789267,5.42450681168288,7.19043065711064,6.6439505838438,8.99396356902289,8.09901069559304,7.69518065940961,17.5081501773822,17.2764186343231,24.6145998042858,10.2902381082794,10.2269679736912,8.35839325244593,24.6388331101846,34.6408014411427,45.3643251650866,32.7379117080897,40.724062977633,36.6745199550802,33.7720373878307,45.2330241736822,7.62036808151557,7.38077745101484,0,21.3750198615943,20.94556531517,23.6836453264348,37.6678467663217,32.8160844699996,30.8879008944541,41.764435650202,43.7149110373405,47.0945042440219,11.8343008897043,11.9624778839027,11.0128051297009,14.0830441982647,12.4274339136855,9.00713349211335,6.9994763666742,8.67915814077248,4.31257693094915,16.2749127876004,5.80289713609076,6.38578218370682,11.5766746216176,10.601737277734,11.3447860301037,5.05791152148994,5.28990979272033,6.33831403506179,14.9091594110418,14.2287167377782,19.7977937801908,13.8441290759376,20.6039233334369,14.3808053048834,16.5213871288268,5.49554945234932,4.18518408828241,5.46844899513593,7.42692559449889,6.84692476950002,4.04219637409348,4.2172007248024,4.5960939330501,2.20231761998777,5.10749352340751,6.45147439676223,4.3522474950964,4.94033275453012,5.2091337055676,7.81712397203867,3.37657566019008,4.27835093775068,4.41942878210502,5.69486723196412,6.52398060388552,14.4637029266382,9.44644501334819,9.27566363845369,43.8816177260507,32.638624017972,39.3983329895607,35.0879265421741,34.9460971935922,19.6622188184453,9.20323741921512,10.1316541795119,11.6602059588412,7.74638808771743,8.98285341900225,12.7402619853323,7.11066703153331,17.7522653629196,14.1881524666055,14.1546844604139,24.4353502598788,7.50919862576798,11.4300447079915,9.02123699183906,7.30717147949139,7.61031140944993,7.38540938707851,7.64326596382081,13.0693254982862,16.5620628382031,12.4355446951124,9.73071607144862,9.22071044700232,9.27534377533653,10.1823803158397,18.6391761218122,12.296793474485,12.3573557019938,30.3993895698224,8.14742846640258,4.79922184794726,10.6738990741374,6.14141621559773,3.20250421973039,2.89005009859588,3.30266208365325,4.09144731728529,5.81806524766768,3.89379031362618,8.55450656342657,16.4217201205323,30.0740082536073,8.83855794723191,7.54698569183682,6.66716102857071,5.04173963454978,7.68594570962147,5.98721192531685,5.63700369253339,7.12133106653939,12.1590584247337,6.89817577385095,5.29497024469894,4.75068035242662,9.20622076195814,6.67313398141435,10.0993128291428,8.84863186554157,5.9710280045548,9.12877143507205,14.6688307055388,22.4489164522518,12.4275463521301,9.38104239924385,13.5046546095761,9.2330446878232,13.1832035270761,9.71882811190483,8.13868806626427,9.92611585178591,12.37712629092,17.9370236405694,12.148392341853,12.6467342891535,20.7603982143972,14.0512073786272,17.4468344388483,4.20579897128254,3.60166143327496,32.0506219494284,34.1141230995972,5.11891801284562,6.0381534683714,6.31450560478257,9.07575860805041,12.2307924114679,11.7939888189787,27.9972146311262,17.6227881554692,14.0747716928151,11.7384318504279,14.2323783596958,19.7740269903929,19.0201483889731,25.0918004300503,9.293727146701,8.79713547094912,4.50830942692322,7.127796474586,9.89157684554891,12.764719220038,10.3707920883782,14.1705742060418,14.2868842335651,18.3861774243483,38.8352941484165,4.83850806576673,3.73462090715086,4.72210436008193,5.68008339887808,11.3353265083636,19.3515647353879,18.4125527968519,15.8892522239535,16.1991233780968,17.2521847832825,18.6070473834252,29.6435789458833,30.0568864757063,40.5438154559522,33.7710464954357,13.8564892624954,8.33762211790133,6.84452901056509,6.95954851678271,5.86725620721255,9.71536293162531,10.4739201989846,16.39122642005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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=67976
|HGNC=
|MCL_coexpression_id=700
|TSSclassifier=NA
|UniProt=E9PXM1,E9Q8R5,Q99JY4
|association_with_transcript=0bp_to_ENSMUST00000169870,ENSMUST00000169891,NM_026485,uc007xfc.1,uc007xfd.1,uc011zxr.1_5end
|cluster_id=chr15:88906488..88906535,+
|description=CAGE_peak_1_at_Trabd_5end
|id=chr15:88906488..88906535,+
|ontology_enrichment_celltype=CL:0000066!9.81e-08!25;CL:0000223!4.11e-07!20
|ontology_enrichment_celltype_v019_2=CL:0000066,9.81e-08,25;CL:0000223,4.11e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!2.04e-13!43;UBERON:0005409!8.67e-13!59;UBERON:0004119!3.49e-10!130;UBERON:0000925!3.49e-10!130;UBERON:0006595!3.49e-10!130;UBERON:0001007!1.01e-09!128;UBERON:0001555!1.01e-09!128;UBERON:0007026!1.01e-09!128;UBERON:0000344!3.01e-09!15;UBERON:0004921!5.14e-09!126;UBERON:0004185!5.14e-09!126;UBERON:0001242!2.34e-08!13;UBERON:0000060!2.34e-08!13;UBERON:0001262!2.34e-08!13;UBERON:0004786!2.34e-08!13;UBERON:0002108!6.37e-08!16
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.01e-09,15;UBERON:0002100,8.88e-09,90;UBERON:0000160,1.10e-08,31;UBERON:0001242,2.34e-08,13;UBERON:0001262,2.34e-08,13;UBERON:0004786,2.34e-08,13;UBERON:0005409,2.74e-08,47
|phase1_expression=8.48788889655408,63.1645487827244,54.1449094873548,60.492842261366,75.1343594919521,45.663161960034,38.0788604170707,9.68424925811822,9.43284438416167,9.36258105287974,5.99262888789267,5.42450681168288,7.19043065711064,6.6439505838438,8.99396356902289,8.09901069559304,7.69518065940961,17.5081501773822,17.2764186343231,24.6145998042858,10.2902381082794,10.2269679736912,8.35839325244593,24.6388331101846,34.6408014411427,45.3643251650866,32.7379117080897,40.724062977633,36.6745199550802,33.7720373878307,45.2330241736822,7.62036808151557,7.38077745101484,0,21.3750198615943,20.94556531517,23.6836453264348,37.6678467663217,32.8160844699996,30.8879008944541,41.764435650202,43.7149110373405,47.0945042440219,11.8343008897043,11.9624778839027,11.0128051297009,14.0830441982647,12.4274339136855,9.00713349211335,6.9994763666742,8.67915814077248,4.31257693094915,16.2749127876004,5.80289713609076,6.38578218370682,11.5766746216176,10.601737277734,11.3447860301037,5.05791152148994,5.28990979272033,6.33831403506179,14.9091594110418,14.2287167377782,19.7977937801908,13.8441290759376,20.6039233334369,14.3808053048834,16.5213871288268,5.49554945234932,4.18518408828241,5.46844899513593,7.42692559449889,6.84692476950002,4.04219637409348,4.2172007248024,4.5960939330501,2.20231761998777,5.10749352340751,6.45147439676223,4.3522474950964,4.94033275453012,5.2091337055676,7.81712397203867,3.37657566019008,4.27835093775068,4.41942878210502,5.69486723196412,6.52398060388552,14.4637029266382,9.44644501334819,9.27566363845369,43.8816177260507,32.638624017972,39.3983329895607,35.0879265421741,34.9460971935922,19.6622188184453,9.20323741921512,10.1316541795119,11.6602059588412,7.74638808771743,8.98285341900225,12.7402619853323,7.11066703153331,17.7522653629196,14.1881524666055,14.1546844604139,24.4353502598788,7.50919862576798,11.4300447079915,9.02123699183906,7.30717147949139,7.61031140944993,7.38540938707851,7.64326596382081,13.0693254982862,16.5620628382031,12.4355446951124,9.73071607144862,9.22071044700232,9.27534377533653,10.1823803158397,18.6391761218122,12.296793474485,12.3573557019938,30.3993895698224,8.14742846640258,4.79922184794726,10.6738990741374,6.14141621559773,3.20250421973039,2.89005009859588,3.30266208365325,4.09144731728529,5.81806524766768,3.89379031362618,8.55450656342657,16.4217201205323,30.0740082536073,8.83855794723191,7.54698569183682,6.66716102857071,5.04173963454978,7.68594570962147,5.98721192531685,5.63700369253339,7.12133106653939,12.1590584247337,6.89817577385095,5.29497024469894,4.75068035242662,9.20622076195814,6.67313398141435,10.0993128291428,8.84863186554157,5.9710280045548,9.12877143507205,14.6688307055388,22.4489164522518,12.4275463521301,9.38104239924385,13.5046546095761,9.2330446878232,13.1832035270761,9.71882811190483,8.13868806626427,9.92611585178591,12.37712629092,17.9370236405694,12.148392341853,12.6467342891535,20.7603982143972,14.0512073786272,17.4468344388483,4.20579897128254,3.60166143327496,32.0506219494284,34.1141230995972,5.11891801284562,6.0381534683714,6.31450560478257,9.07575860805041,12.2307924114679,11.7939888189787,27.9972146311262,17.6227881554692,14.0747716928151,11.7384318504279,14.2323783596958,19.7740269903929,19.0201483889731,25.0918004300503,9.293727146701,8.79713547094912,4.50830942692322,7.127796474586,9.89157684554891,12.764719220038,10.3707920883782,14.1705742060418,14.2868842335651,18.3861774243483,38.8352941484165,4.83850806576673,3.73462090715086,4.72210436008193,5.68008339887808,11.3353265083636,19.3515647353879,18.4125527968519,15.8892522239535,16.1991233780968,17.2521847832825,18.6070473834252,29.6435789458833,30.0568864757063,40.5438154559522,33.7710464954357,13.8564892624954,8.33762211790133,6.84452901056509,6.95954851678271,5.86725620721255,9.71536293162531,10.4739201989846,16.3912264200551,10.4039195110086,10.85176979279,13.0752910299139,17.0417847304368,12.9513736399422,13.018415272336,9.04747703635634,16.86107619838,44.7505488447323,33.1124095565679,6.74312477948726,6.68106613575558,6.22952792431367,10.856249869788,5.99465616890888,4.68526493155966,6.67812532971677,3.82350076724083,6.68396022247182,6.79383673893198,8.09621403349789,9.64444331107329,5.13874111330481,1.60660658210904,9.22610553853746,8.369083372361,6.8412522928502,11.5479086080775,58.4078608695836,8.01176099311439,9.06970670894253,34.1375194358176,44.8858877178775,41.8111801203741,29.4608254211772,36.7169066772281,33.1542561897791,60.9950942816125,79.0639564312491,86.633856328477,14.6389030474129,7.0223826672211,8.27895576209629,9.00215547132688,5.67488747655275,8.02659679209317,8.22745103010605,10.9607381681256,16.6616912725234,15.6755732439227,56.0142131059603,11.8718102117866,7.91175690809937,10.6150747873554,13.6084472163576,15.7575263755259,21.569581910609,6.67531087237835,10.5939946094669,6.81076664278634,7.77817014952789,6.40452753815949,7.65487675237741,9.60868327467395,6.62915876976036,5.17820373597535,8.7065983496787,25.7761066864081,5.852215881251,9.96265388921559,13.3926622619034,16.517975385143,20.3077184283945,19.1507371866445,18.5970275382006,20.6787194167383,18.9237861006018,46.6004484815194,2.25477175473676,4.48549638131936,6.45288112782681,3.69457257853691,6.58715099736429,3.37912250981556,5.16371850041317,7.68205870579306,6.8158573876712,2.17425708743405,5.18454011264158,2.21207784439725,8.10900861160657,6.7789231728786,4.67714962720062,3.58053391334963,2.78153896693771,3.00488623799922,1.47689527174577,1.9183625490148,2.28620419965,2.92395936896837,2.53390489923356,2.5977197242889,1.75315353272353,19.272082607293,9.10142408833665,8.16396095146229,10.2409615982088,14.2960299583821,20.64507229963,17.2162526811229,21.2224695288275,62.1949409003851,3.3885110557024,2.30162618253588,2.86447756719698,4.1244763762485,2.05524755931193,3.0215755895588,2.02506750069542,1.80128481289688,3.17199686288943,2.07104124700728,7.16132698330819,5.98537310101547,5.9756762013947,9.96737539980005,7.1268475293514,11.0306105070008,8.66762238426299,9.06554251851134,8.66481865897901,9.09709962349671,6.33698249725599,8.86543804514558,10.3005658216871,10.5001249943986,9.70659425349864,6.19181798667996,10.7772423128716,10.6100071255038,9.06588981767275,7.80154276712306,7.20025430009372,7.98641127717019,10.2527561677348,7.84870649814574,10.1638130848557,10.2383675548929,10.426894453748,9.47050961176234,8.96307151382688,7.2948495315506,9.37216643180976,12.7070782264477,12.6861623382604,11.0005157242036,12.346023102793,9.99242311751784,10.7608539884888,9.45432637812513,13.7727599089567,11.2501623750953,9.97031693167812
|short_description=p1@Trabd
}}

Latest revision as of 07:10, 27 September 2015

Short description:p1@Trabd
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trabd_5end
Coexpression cluster:MCL_coexpression_mm9:700
Association with transcript: 0bp_to_ENSMUST00000169870, ENSMUST00000169891, NM_026485, uc007xfc.1, uc007xfd.1, uc011zxr.1_5end
EntrezGene:Trabd
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Trabd

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I563.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I654.14
CD326+ enterocyte, pool1.CNhs13542.11848-124I360.49
CD326+ enterocyte, pool2.CNhs13197.11849-124I475.13
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I745.66
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I838.08
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E99.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E79.43
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.36
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.99
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.42
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.19
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.64
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A38.10
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A217.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A417.28
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A624.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.36
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D124.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D234.64
GP2+ M cell, pool1.CNhs13228.11845-124H945.36
GP2+ M cell, pool2.CNhs13231.11846-124I132.74
GP2+ M cell, pool3.CNhs13240.11847-124I240.72
Ileum epithelium, pool1.CNhs13199.10252-104B936.67
Ileum epithelium, pool2.CNhs13232.10253-104C133.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C845.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I37.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G67.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F521.38
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F620.95
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F723.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G837.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H132.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H330.89
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G941.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H243.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H447.09
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D811.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.96
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.01
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.08
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C212.43
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.01
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A216.27
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.58
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.34
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C614.91
Mouse Meningeal cells, donor3.CNhs12109.11639-122D114.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C719.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E713.84
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D220.60
Mouse Microglia, donor1.CNhs12629.11718-123C814.38
Mouse Microglia, donor2.CNhs12634.11736-123E816.52
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.22
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.35
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.94
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.52
Mouse Schwann, donor1.CNhs12507.11728-123D914.46
Mouse Schwann, donor2.CNhs12573.11746-123F99.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.28
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F743.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C432.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C839.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F435.09
Mouse hepatocyte, donor8.CNhs13091.11824-124F634.95
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A719.66
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I79.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.13
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I811.66
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.75
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G117.75
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G214.19
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G314.15
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B624.44
accessory axillary lymph node, adult.CNhs10475.1063-29H97.51
adrenal gland, adult.CNhs10508.49-24D711.43
adrenal gland, embryo E14.CNhs11038.406-44C59.02
adrenal gland, embryo E16.CNhs11004.1254-43D67.31
adrenal gland, embryo E17.CNhs11043.1263-45I17.61
adrenal gland, embryo E18.CNhs11026.1262-18F57.39
adrenal gland, neonate N00.CNhs11191.1311-23C17.64
adrenal gland, neonate N25.CNhs11223.1377-27I313.07
amnion, adult pregnant day17.5.CNhs10488.583-22A816.56
aorta, adult.CNhs10498.46-23H112.44
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F59.22
bone (os femoris), neonate N16.CNhs11225.1525-43A69.28
bone (os femoris), neonate N20.CNhs11195.1350-25C310.18
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B212.30
cerebellum, neonate N30.CNhs11135.1395-42I212.36
colon, adult.CNhs10468.36-18H730.40
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.15
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D410.67
corpora quadrigemina, adult.CNhs10501.16-22A46.14
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F12.89
cortex, adult.CNhs10473.12-14D53.30
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F25.82
diencephalon, neonate N30.CNhs11201.1388-42B23.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A216.42
epididymis, adult.CNhs10490.58-23B230.07
eyeball, adult.CNhs10484.31-12G48.84
eyeball, embryo E12.CNhs11016.345-16C67.55
eyeball, embryo E14.CNhs10521.399-16E26.67
eyeball, embryo E15.CNhs10593.426-16C95.04
eyeball, embryo E17.CNhs11023.1261-18D47.69
eyeball, neonate N00.CNhs11207.633-15C65.99
eyeball, neonate N01.CNhs11140.1532-43E75.64
eyeball, neonate N02.CNhs11205.1551-44G87.12
eyeball, neonate N16.CNhs11188.777-19A212.16
forelimb, embryo E11.CNhs10596.335-25E26.90
forelimb, embryo E12.CNhs10600.359-14H25.29
forelimb, embryo E13.CNhs10589.384-1E24.75
forelimb, embryo E14.CNhs10577.413-26A89.21
forelimb, embryo E15.CNhs11007.437-20E76.67
forelimb, embryo E17.CNhs10598.1517-43C410.10
forelimb, embryo E18.CNhs11008.1520-43B58.85
gonad, embryo E13.CNhs11044.1564-45I65.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.13
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D214.67
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D522.45
heart, embryo E11.CNhs10586.331-24E912.43
heart, embryo E12.CNhs11015.353-12F59.38
heart, embryo E13.CNhs11013.376-3I913.50
heart, embryo E14.CNhs10597.403-26D49.23
heart, embryo E15.CNhs11017.431-16C813.18
heart, embryo E16.CNhs11021.457-17C69.72
heart, embryo E17.CNhs11025.479-18E58.14
heart, embryo E18.CNhs11030.1283-20G39.93
heart, neonate N00.CNhs11213.639-21E312.38
heart, neonate N03.CNhs11221.1349-25I217.94
heart, neonate N10.CNhs11118.749-24G112.15
heart, neonate N16.CNhs11209.782-15G112.65
heart, neonate N20.CNhs11127.821-26I620.76
heart, neonate N25.CNhs11196.1351-25D314.05
heart, neonate N30.CNhs11202.1390-42D217.45
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G13.60
intestinal mucosa, adult.CNhs10506.860-29I332.05
intestine, adult.CNhs10496.178-9A334.11
intestine, embryo E12.CNhs11019.1251-16I55.12
intestine, embryo E13.CNhs11010.381-16D56.04
intestine, embryo E15.CNhs10602.976-16D86.31
intestine, embryo E16.CNhs10585.463-22H49.08
intestine, embryo E17.CNhs10582.482-18D312.23
intestine, embryo E18.CNhs10526.1289-20F711.79
intestine, neonate N00.CNhs11126.644-26D128.00
intestine, neonate N01.CNhs11192.1322-23E917.62
intestine, neonate N06.CNhs11102.688-20B814.07
intestine, neonate N07.CNhs11095.720-20F211.74
intestine, neonate N10.CNhs11098.755-23A514.23
intestine, neonate N20.CNhs11187.827-18D119.77
intestine, neonate N25.CNhs11121.1352-25E319.02
intestine, neonate N30.CNhs11131.1384-42G125.09
kidney, embryo E14.CNhs10606.411-4I99.29
kidney, embryo E15.CNhs10997.434-16F88.80
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I27.13
kidney, embryo E18.CNhs11001.1288-20C79.89
kidney, neonate N00.CNhs11214.646-21G712.76
kidney, neonate N10.CNhs11206.758-6D510.37
kidney, neonate N20.CNhs11113.832-19I114.17
kidney, neonate N25.CNhs11122.1353-25F314.29
kidney, neonate N30.CNhs11203.1385-42H118.39
liver, adult pregnant day01.CNhs10466.508-5B238.84
liver, embryo E12.CNhs10601.355-15F84.84
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E14.72
liver, embryo E15.CNhs10520.433-16D75.68
liver, embryo E16.CNhs10523.462-17F511.34
liver, embryo E17.CNhs10510.481-18A319.35
liver, embryo E18.CNhs10579.499-43G418.41
liver, neonate N00.CNhs11117.641-24F415.89
liver, neonate N03.CNhs11123.1345-25G216.20
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H218.61
liver, neonate N10.CNhs11115.751-24B929.64
liver, neonate N20.CNhs11220.823-25A330.06
liver, neonate N25.CNhs11198.1368-26H140.54
liver, neonate N30.CNhs11106.1382-42D133.77
lung, adult.CNhs10474.28-22B113.86
lung, embryo E12.CNhs10522.354-16G28.34
lung, embryo E14.CNhs10604.404-26F86.84
lung, embryo E15.CNhs11020.432-17C56.96
lung, embryo E16.CNhs10998.458-17B65.87
lung, embryo E17.CNhs10605.480-44A69.72
lung, embryo E18.CNhs10583.1287-20I610.47
lung, neonate N00.CNhs11224.640-42C616.39
lung, neonate N06.CNhs11212.683-20E510.40
lung, neonate N07.CNhs11111.715-19A310.85
lung, neonate N10.CNhs11219.750-23E613.08
lung, neonate N20.CNhs11109.822-18A417.04
lung, neonate N25.CNhs11119.1359-25C712.95
lung, neonate N30.CNhs11133.1394-42H213.02
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A116.86
mammary gland, adult lactating day02.CNhs10480.595-22B644.75
mammary gland, adult pregnant day19.CNhs10476.588-5H233.11
medulla oblongata, adult.CNhs10477.17-12C26.74
medulla oblongata, neonate N30.CNhs11200.1396-42A36.68
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.23
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.86
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.69
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.68
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.82
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.79
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.64
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I79.23
ovary, embryo E18.CNhs11040.505-44H78.37
ovary, neonate N00.CNhs11217.1299-22I46.84
oviduct, adult pregnant day01.CNhs10500.988-6G611.55
pancreas, adult.CNhs10486.34-16E458.41
pancreas, embryo E14.CNhs11012.405-44F48.01
pancreas, embryo E15.CNhs11042.1556-45F29.07
pancreas, embryo E16.CNhs11003.460-26E534.14
pancreas, embryo E17.CNhs10599.1558-45G344.89
pancreas, embryo E18.CNhs10580.1535-43I741.81
pancreas, neonate N00.CNhs11105.645-26G929.46
pancreas, neonate N01.CNhs11138.1531-43D736.72
pancreas, neonate N02.CNhs11139.1539-43D833.15
pancreas, neonate N16.CNhs11136.787-43B661.00
pancreas, neonate N25.CNhs11094.1555-45E279.06
pancreas, neonate N30.CNhs11182.1548-44H586.63
pituitary gland, adult.CNhs10493.21-1G814.64
pituitary gland, embryo E12.CNhs11018.346-16E67.02
pituitary gland, embryo E13.CNhs11009.370-44C78.28
pituitary gland, embryo E14.CNhs11037.398-44A59.00
pituitary gland, embryo E15.CNhs10592.427-16B95.67
pituitary gland, embryo E16.CNhs11036.449-43F68.03
pituitary gland, embryo E17.CNhs11039.1265-44F58.23
pituitary gland, neonate N00.CNhs11190.1308-22E910.96
placenta, adult pregnant day10.CNhs10472.539-13I716.66
placenta, adult pregnant day17.CNhs10464.577-18G315.68
prostate, adult.CNhs10470.859-1F856.01
skin, adult.CNhs10492.30-1C311.87
skin, neonate N00.CNhs11124.650-25G47.91
skin, neonate N03.CNhs11215.662-22H310.62
skin, neonate N06.CNhs11097.693-20I513.61
skin, neonate N10.CNhs11108.762-6C415.76
small intestine, neonate N16.CNhs11114.790-21I121.57
spinal cord, adult.CNhs10505.24-13C96.68
spleen, adult.CNhs10465.25-2G210.59
spleen, embryo E16.CNhs11035.461-43C16.81
spleen, embryo E18.CNhs11011.1271-21F27.78
spleen, neonate N10.CNhs11116.752-24D16.40
spleen, neonate N20.CNhs11112.824-19H17.65
spleen, neonate N25.CNhs11099.1354-25G39.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.71
stomach, adult.CNhs10503.33-1H625.78
stomach, embryo E12.CNhs10588.356-43E35.85
stomach, embryo E15.CNhs10603.1252-16G89.96
stomach, embryo E16.CNhs11022.459-17D413.39
stomach, embryo E17.CNhs11006.1035-18D516.52
stomach, embryo E18.CNhs10999.1286-20C620.31
stomach, neonate N03.CNhs11193.1340-24B819.15
stomach, neonate N07.CNhs11210.718-18A918.60
stomach, neonate N25.CNhs11104.1355-25E420.68
stomach, neonate N30.CNhs11134.1386-42I118.92
submandibular gland, adult.CNhs10469.59-29C146.60
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F54.49
testis, embryo E15.CNhs11034.443-27C56.45
testis, embryo E16.CNhs11033.470-26G53.69
testis, embryo E17.CNhs11029.486-18I56.59
testis, embryo E18.CNhs11027.503-18G53.38
testis, neonate N00.CNhs11189.1300-22B75.16
testis, neonate N07.CNhs11222.726-26I47.68
testis, neonate N10.CNhs11204.763-44D96.82
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E25.18
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I48.11
thymus, embryo E15.CNhs11005.430-45I26.78
thymus, embryo E16.CNhs11002.456-26C54.68
thymus, embryo E17.CNhs10581.478-18C13.58
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F83.00
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C41.92
thymus, neonate N07.CNhs11211.713-19D32.29
thymus, neonate N10.CNhs11194.748-24E42.92
thymus, neonate N20.CNhs11186.820-7A22.53
thymus, neonate N25.CNhs11125.1362-25G72.60
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B419.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H39.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.16
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.24
urinary bladder, adult.CNhs10481.879-12E414.30
uterus, adult pregnant day19.CNhs10497.590-15F520.65
uterus, adult.CNhs10509.92-27E517.22
vagina, adult.CNhs10502.89-27D521.22
vesicular gland, adult.CNhs10491.51-27F862.19
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I87.16
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H25.98
whole body, embryo E14.5.CNhs10578.420-27D29.97
whole body, embryo E14.CNhs10519.395-14B17.13
whole body, embryo E16.CNhs10514.453-14F211.03
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.10
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.34
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.71
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.99
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.85
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.24
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.43
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.96
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.71
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.00
whole body, embryo E17.5.CNhs10513.490-9F912.35
whole body, embryo E17.CNhs10517.475-3I59.99
whole body, embryo E18.CNhs10516.493-3B310.76
whole body, neonate N00.CNhs10525.657-19C29.45
whole body, neonate N01.CNhs10576.659-23C613.77
whole body, neonate N06.CNhs10515.692-21D111.25
whole body, neonate N10.CNhs10518.761-6B49.97





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell9.81e-0825
endodermal cell4.11e-0720

Uber anatomy
Ontology termp-valuen
mucosa3.01e-0915
trunk8.88e-0990
intestine1.10e-0831
intestinal mucosa2.34e-0813
wall of intestine2.34e-0813
gastrointestinal system mucosa2.34e-0813
gastrointestinal system2.74e-0847
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