FFCP PHASE1:Mm9::chr17:24769528..24769548,-: Difference between revisions
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{{FFCP|EntrezGene=22084|HGNC=|UniProt=E9QMW6,Q7TT21,E9QLU3,E9QN11,E9QN07,E9QMZ9,E9QMZ6,E9PY87,Q3UGI8|association_with_transcript=25bp_to_ENSMUST00000088420,ENSMUST00000097373,ENSMUST00000097374,ENSMUST00000115290,ENSMUST00000115291,ENSMUST00000115292,ENSMUST00000115294,ENSMUST00000163283,NM_001039363,NM_011647,uc008awz.1,uc008axa.1,uc008axb.1,uc008axc.1,uc008axd.1,uc008axe.1,uc008axg.1,uc008axh.1_5end|description=CAGE_peak_2_at_Tsc2_5end|id=chr17:24769528..24769548,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.81e-15!63;UBERON:0001049!7.38e-14!52;UBERON:0005068!7.38e-14!52;UBERON:0006241!7.38e-14!52;UBERON:0007135!7.38e-14!52;UBERON:0004111!1.38e-13!122;UBERON:0000955!4.44e-13!50;UBERON:0006238!4.44e-13!50;UBERON:0000025!1.01e-12!114;UBERON:0002616!1.89e-12!49;UBERON:0003056!3.02e-12!49;UBERON:0002346!4.05e-12!71;UBERON:0003075!4.05e-12!71;UBERON:0007284!4.05e-12!71;UBERON:0001017!7.83e-11!73;UBERON:0005743!7.83e-11!73;UBERON:0003080!9.74e-11!40;UBERON:0000153!1.64e-10!94;UBERON:0002780!2.14e-10!39;UBERON:0001890!2.14e-10!39;UBERON:0006240!2.14e-10!39;UBERON:0004121!4.59e-10!102;UBERON:0000924!4.59e-10!102;UBERON:0006601!4.59e-10!102;UBERON:0000073!5.82e-10!75;UBERON:0001016!5.82e-10!75;UBERON:0007811!1.76e-09!86;UBERON:0002020!5.23e-09!34;UBERON:0000475!5.69e-09!200;UBERON:0000477!7.94e-09!154;UBERON:0002791!1.25e-07!29;UBERON:0003528!1.25e-07!29;UBERON:0001893!1.25e-07!29;UBERON:0000468!1.85e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.79e-14,54;UBERON:0001049,7.38e-14,52;UBERON:0005068,7.38e-14,52;UBERON:0006241,7.38e-14,52;UBERON:0007135,7.38e-14,52;UBERON:0010314,1.24e-13,92;UBERON:0004111,1.39e-13,122;UBERON:0002346,1.72e-13,64;UBERON:0003075,1.72e-13,64;UBERON:0007284,1.72e-13,64;UBERON:0000025,1.02e-12,114;UBERON:0000955,1.16e-12,47;UBERON:0006238,1.16e-12,47;UBERON:0010371,2.98e-12,73;UBERON:0003056,3.02e-12,49;UBERON:0002616,4.93e-12,46;UBERON:0004121,7.72e-11,95;UBERON:0000924,7.72e-11,95;UBERON:0006601,7.72e-11,95;UBERON:0001017,7.83e-11,73;UBERON:0003080,9.74e-11,40;UBERON:0002780,2.14e-10,39;UBERON:0001890,2.14e-10,39;UBERON:0006240,2.14e-10,39;UBERON:0001016,5.82e-10,75;UBERON:0002020,5.23e-09,34;UBERON:0003528,1.25e-07,29;UBERON:0002791,1.25e-07,29;UBERON:0001893,1.25e-07,29|phase1_expression=7.8472935081349,2.44282785347553,1.36499771816861,3.62957053568196,2.50447864973174,3.69334398206158,1.86890112476421,4.77756296733832,2.53419699873,2.10658073689794,5.47897498321616,4.86610169871552,5.47842335779858,5.15780374272085,3.33109761815663,3.23960427823721,2.79824751251259,3.62781490161973,4.9361196098066,4.66828616977833,6.63337663178344,3.47518329203099,2.61199789138935,3.03985603307473,2.52350209173887,3.44539178469012,1.29228598847722,3.01659725760245,3.42042155021473,3.78045194639896,1.99557459589774,10.1604907753541,15.9916844771988,0,2.88851619751275,1.16364251750945,3.87921776898501,5.02237956884289,6.2506827561904,6.80580867165938,4.70585190424811,2.73218193983378,4.36959317728038,7.67970589651021,8.11015449756117,5.87349606917381,7.04152209913235,6.97680500417429,8.12838876117546,8.94377535741704,6.43937539476668,12.9377307928474,4.69791296961662,3.62681071005672,5.04140698713696,4.11615097657515,4.58453503902011,0.515672092277442,10.5204559646991,4.23192783417626,10.1413024560989,6.09920157724438,2.66788438833342,6.29929802096979,3.9554654502679,4.9733608046227,5.69240209984969,8.06858441175265,7.25827286159344,5.94026128659439,6.94072372459561,9.14083150092171,9.49734726091938,9.18680994112155,9.77623804386011,12.8690630125403,7.70811166995721,9.57655035638908,6.29786786350598,8.83638127792299,13.174220678747,8.33461392890816,6.97957497503452,9.56696437053856,9.77908785771585,7.07108605136802,7.40332740155335,9.69277118291563,4.01348824665875,4.91215140694106,6.37701875143691,6.0229671388697,2.03991400112325,5.39703191637817,7.79731700937203,2.68816132258401,6.46044332606059,4.60161870960756,2.33807404142582,1.7666978725517,5.91542363062058,10.2661181931454,5.09610479413291,14.2213340630666,3.030874574157,1.77351905832569,1.01104889002957,4.45317130904334,9.83963957859253,9.20341262201914,5.89850111004862,2.74018930480927,5.07354093963329,5.27529241934179,7.17291113527799,6.40899615781345,4.44950941921873,13.158541479712,7.07688441559899,6.47067399789637,7.72945314611377,3.87900202508178,3.72783522436244,8.49064311333487,8.16842156572475,4.34276993854605,2.87556298814209,4.19931911695385,2.92261522268049,8.68785708547972,12.8100168789215,12.8167439155122,12.3415267336516,11.2514801225345,7.48036960414416,9.5722345209977,6.61955865027056,7.0911973247753,8.33985102831127,7.99679052368601,7.28674480591141,5.28774840196988,7.38254732201932,7.83665052745718,9.11689088627793,10.1209839025031,10.2134879770104,6.46758426847539,9.26942369611222,7.18603104637713,7.03804496655795,6.57587197282724,6.11703948296315,9.4028084960985,5.55611768301447,6.76716507182877,2.1066395619397,3.60287069960601,2.84163499395593,5.38527008592305,6.80125573945179,6.30217215113552,7.81257627431194,8.26409773339096,6.78775296704464,8.37122201101468,6.9751084363901,7.00592054203017,9.2153515951549,8.04420573987567,9.80932595504854,8.47959927066927,10.3188554186794,10.1996878257883,17.4540657308226,9.15851050175631,5.61711931072457,1.85115396664481,8.10495352033889,6.96710015581316,5.54130083685001,4.23535401709019,5.33707305227689,4.1849637744763,4.74529061544512,4.28217282282428,5.02670417600539,5.96869416123452,5.26403035221624,8.08937467788799,5.18731319699266,6.77080329064848,5.87970492954553,5.59817711787671,1.1270773567308,7.127796474586,8.72786192254316,10.0995580642059,8.91635173452028,7.23289725100051,6.43694784149637,8.14421281883883,6.81841042300442,4.67166296005063,4.91397487783007,5.62155280962134,4.46292267054706,5.54707467430559,2.80088436959562,5.4662266115654,3.89124544260085,3.84385978463314,4.31304619582064,8.18710084870708,5.61667811606209,6.56705082662491,5.56131981917928,12.0610880340842,10.1614254591633,5.68474235311454,6.51859905768104,5.43184274480602,6.10194645550105,7.37027532743989,6.42717830392237,10.3420833364633,9.30047350226527,9.52298165489732,8.92946704481928,8.68475567993411,8.28887912956299,7.08780387049407,1.50791283939272,2.17562273527484,5.90117127622843,6.34654516500885,10.1146871692309,7.501547941901,5.73772308818364,10.3513080153793,4.41711507182759,3.51394869866975,4.52389135238878,3.58453196928828,4.90157082981267,5.09537755419898,4.85772842009873,3.21481443702443,4.34816555741176,19.6006003017302,7.38088443082997,8.54714897602825,9.93610452056814,7.4236555337641,9.2921596837974,5.09839335925461,6.34879469625977,6.03536255218874,7.08724542913855,4.61152721915891,3.10113951801865,7.27067458955011,3.92147116223193,4.42451461110142,10.5418608574999,11.3449097573006,10.2131881726136,7.0223826672211,6.98536892426874,6.64444808597936,8.15765074754458,10.7021290561242,9.3792941743209,12.4830629136986,5.16277757740163,4.87213762986786,7.71849393192367,6.43056386471772,6.62004149453213,6.6947346670253,6.56547892017251,3.61109979439135,7.86998258900597,8.34413859047294,4.95525554313773,7.01715351074956,6.66700298530962,4.33247451110789,4.78429797023588,5.49067615695654,4.07948231985253,4.47844647435706,4.69879910935041,3.81868247206045,6.01038387804157,8.94605655358134,4.64422965533745,6.06356058441959,5.67742665740062,6.20375993370175,7.52146447100557,7.85267825952089,6.99920855775682,9.32008969630389,6.76431526421028,8.22341003241883,7.2801735801123,8.16694991045,6.19967152693109,6.42033276864957,7.74557775061976,8.33308063001281,11.5345278868282,6.52277126230216,7.20075015644664,4.4241556887945,6.28448167399509,5.6491026440655,3.24802057444488,4.29664069601955,6.35780335300048,6.00977247599844,7.23678683155428,5.85605409699256,5.10585604588499,5.34378781225255,3.99577311032985,6.63861707318273,6.89573722871257,7.70883304291719,2.66383144048878,3.22969883794113,4.19711540910196,7.14801497919105,4.50437941082837,5.12824547948342,5.35920947697665,6.52043735245972,5.0827665835536,6.44455331110048,6.30185064783336,7.90524638780963,6.16574267793578,7.55393897389701,9.45031500324528,5.40385443869065,9.06284817968409,10.3552062350364,6.43481555021895,5.98537310101547,6.82934423016537,8.50873509739029,6.70762120409543,6.06683577885047,7.11189528965169,5.97501665992793,5.77654577265267,7.07552192938633,6.08350319736575,6.79054828989874,6.9294715527713,7.10679191694049,7.3517400263185,5.23923060411381,6.60540657885676,7.90927803901191,7.82963211526283,5.00476328456951,4.80016953339582,6.38912902173615,5.00715998889374,6.97662799835177,6.39943786824248,4.90764725771724,6.58540702341981,6.31367307450823,7.74083448921412,6.17256498823512,7.47400614182297,5.61475549540712,5.32000356120596,8.36658942404216,5.20847849649082,12.7403394748352,6.78401664491684,6.01638951335235,6.31251495827183,5.7353768971074,4.40548887678801|short_description=p2@Tsc2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22084 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=E9QMW6,Q7TT21,E9QLU3,E9QN11,E9QN07,E9QMZ9,E9QMZ6,E9PY87,Q3UGI8 | |||
|association_with_transcript=25bp_to_ENSMUST00000088420,ENSMUST00000097373,ENSMUST00000097374,ENSMUST00000115290,ENSMUST00000115291,ENSMUST00000115292,ENSMUST00000115294,ENSMUST00000163283,NM_001039363,NM_011647,uc008awz.1,uc008axa.1,uc008axb.1,uc008axc.1,uc008axd.1,uc008axe.1,uc008axg.1,uc008axh.1_5end | |||
|cluster_id=chr17:24769528..24769548,- | |||
|description=CAGE_peak_2_at_Tsc2_5end | |||
|id=chr17:24769528..24769548,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.81e-15!63;UBERON:0001049!7.38e-14!52;UBERON:0005068!7.38e-14!52;UBERON:0006241!7.38e-14!52;UBERON:0007135!7.38e-14!52;UBERON:0004111!1.38e-13!122;UBERON:0000955!4.44e-13!50;UBERON:0006238!4.44e-13!50;UBERON:0000025!1.01e-12!114;UBERON:0002616!1.89e-12!49;UBERON:0003056!3.02e-12!49;UBERON:0002346!4.05e-12!71;UBERON:0003075!4.05e-12!71;UBERON:0007284!4.05e-12!71;UBERON:0001017!7.83e-11!73;UBERON:0005743!7.83e-11!73;UBERON:0003080!9.74e-11!40;UBERON:0000153!1.64e-10!94;UBERON:0002780!2.14e-10!39;UBERON:0001890!2.14e-10!39;UBERON:0006240!2.14e-10!39;UBERON:0004121!4.59e-10!102;UBERON:0000924!4.59e-10!102;UBERON:0006601!4.59e-10!102;UBERON:0000073!5.82e-10!75;UBERON:0001016!5.82e-10!75;UBERON:0007811!1.76e-09!86;UBERON:0002020!5.23e-09!34;UBERON:0000475!5.69e-09!200;UBERON:0000477!7.94e-09!154;UBERON:0002791!1.25e-07!29;UBERON:0003528!1.25e-07!29;UBERON:0001893!1.25e-07!29;UBERON:0000468!1.85e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.79e-14,54;UBERON:0001049,7.38e-14,52;UBERON:0005068,7.38e-14,52;UBERON:0006241,7.38e-14,52;UBERON:0007135,7.38e-14,52;UBERON:0010314,1.24e-13,92;UBERON:0004111,1.39e-13,122;UBERON:0002346,1.72e-13,64;UBERON:0003075,1.72e-13,64;UBERON:0007284,1.72e-13,64;UBERON:0000025,1.02e-12,114;UBERON:0000955,1.16e-12,47;UBERON:0006238,1.16e-12,47;UBERON:0010371,2.98e-12,73;UBERON:0003056,3.02e-12,49;UBERON:0002616,4.93e-12,46;UBERON:0004121,7.72e-11,95;UBERON:0000924,7.72e-11,95;UBERON:0006601,7.72e-11,95;UBERON:0001017,7.83e-11,73;UBERON:0003080,9.74e-11,40;UBERON:0002780,2.14e-10,39;UBERON:0001890,2.14e-10,39;UBERON:0006240,2.14e-10,39;UBERON:0001016,5.82e-10,75;UBERON:0002020,5.23e-09,34;UBERON:0003528,1.25e-07,29;UBERON:0002791,1.25e-07,29;UBERON:0001893,1.25e-07,29 | |||
|phase1_expression=7.8472935081349,2.44282785347553,1.36499771816861,3.62957053568196,2.50447864973174,3.69334398206158,1.86890112476421,4.77756296733832,2.53419699873,2.10658073689794,5.47897498321616,4.86610169871552,5.47842335779858,5.15780374272085,3.33109761815663,3.23960427823721,2.79824751251259,3.62781490161973,4.9361196098066,4.66828616977833,6.63337663178344,3.47518329203099,2.61199789138935,3.03985603307473,2.52350209173887,3.44539178469012,1.29228598847722,3.01659725760245,3.42042155021473,3.78045194639896,1.99557459589774,10.1604907753541,15.9916844771988,0,2.88851619751275,1.16364251750945,3.87921776898501,5.02237956884289,6.2506827561904,6.80580867165938,4.70585190424811,2.73218193983378,4.36959317728038,7.67970589651021,8.11015449756117,5.87349606917381,7.04152209913235,6.97680500417429,8.12838876117546,8.94377535741704,6.43937539476668,12.9377307928474,4.69791296961662,3.62681071005672,5.04140698713696,4.11615097657515,4.58453503902011,0.515672092277442,10.5204559646991,4.23192783417626,10.1413024560989,6.09920157724438,2.66788438833342,6.29929802096979,3.9554654502679,4.9733608046227,5.69240209984969,8.06858441175265,7.25827286159344,5.94026128659439,6.94072372459561,9.14083150092171,9.49734726091938,9.18680994112155,9.77623804386011,12.8690630125403,7.70811166995721,9.57655035638908,6.29786786350598,8.83638127792299,13.174220678747,8.33461392890816,6.97957497503452,9.56696437053856,9.77908785771585,7.07108605136802,7.40332740155335,9.69277118291563,4.01348824665875,4.91215140694106,6.37701875143691,6.0229671388697,2.03991400112325,5.39703191637817,7.79731700937203,2.68816132258401,6.46044332606059,4.60161870960756,2.33807404142582,1.7666978725517,5.91542363062058,10.2661181931454,5.09610479413291,14.2213340630666,3.030874574157,1.77351905832569,1.01104889002957,4.45317130904334,9.83963957859253,9.20341262201914,5.89850111004862,2.74018930480927,5.07354093963329,5.27529241934179,7.17291113527799,6.40899615781345,4.44950941921873,13.158541479712,7.07688441559899,6.47067399789637,7.72945314611377,3.87900202508178,3.72783522436244,8.49064311333487,8.16842156572475,4.34276993854605,2.87556298814209,4.19931911695385,2.92261522268049,8.68785708547972,12.8100168789215,12.8167439155122,12.3415267336516,11.2514801225345,7.48036960414416,9.5722345209977,6.61955865027056,7.0911973247753,8.33985102831127,7.99679052368601,7.28674480591141,5.28774840196988,7.38254732201932,7.83665052745718,9.11689088627793,10.1209839025031,10.2134879770104,6.46758426847539,9.26942369611222,7.18603104637713,7.03804496655795,6.57587197282724,6.11703948296315,9.4028084960985,5.55611768301447,6.76716507182877,2.1066395619397,3.60287069960601,2.84163499395593,5.38527008592305,6.80125573945179,6.30217215113552,7.81257627431194,8.26409773339096,6.78775296704464,8.37122201101468,6.9751084363901,7.00592054203017,9.2153515951549,8.04420573987567,9.80932595504854,8.47959927066927,10.3188554186794,10.1996878257883,17.4540657308226,9.15851050175631,5.61711931072457,1.85115396664481,8.10495352033889,6.96710015581316,5.54130083685001,4.23535401709019,5.33707305227689,4.1849637744763,4.74529061544512,4.28217282282428,5.02670417600539,5.96869416123452,5.26403035221624,8.08937467788799,5.18731319699266,6.77080329064848,5.87970492954553,5.59817711787671,1.1270773567308,7.127796474586,8.72786192254316,10.0995580642059,8.91635173452028,7.23289725100051,6.43694784149637,8.14421281883883,6.81841042300442,4.67166296005063,4.91397487783007,5.62155280962134,4.46292267054706,5.54707467430559,2.80088436959562,5.4662266115654,3.89124544260085,3.84385978463314,4.31304619582064,8.18710084870708,5.61667811606209,6.56705082662491,5.56131981917928,12.0610880340842,10.1614254591633,5.68474235311454,6.51859905768104,5.43184274480602,6.10194645550105,7.37027532743989,6.42717830392237,10.3420833364633,9.30047350226527,9.52298165489732,8.92946704481928,8.68475567993411,8.28887912956299,7.08780387049407,1.50791283939272,2.17562273527484,5.90117127622843,6.34654516500885,10.1146871692309,7.501547941901,5.73772308818364,10.3513080153793,4.41711507182759,3.51394869866975,4.52389135238878,3.58453196928828,4.90157082981267,5.09537755419898,4.85772842009873,3.21481443702443,4.34816555741176,19.6006003017302,7.38088443082997,8.54714897602825,9.93610452056814,7.4236555337641,9.2921596837974,5.09839335925461,6.34879469625977,6.03536255218874,7.08724542913855,4.61152721915891,3.10113951801865,7.27067458955011,3.92147116223193,4.42451461110142,10.5418608574999,11.3449097573006,10.2131881726136,7.0223826672211,6.98536892426874,6.64444808597936,8.15765074754458,10.7021290561242,9.3792941743209,12.4830629136986,5.16277757740163,4.87213762986786,7.71849393192367,6.43056386471772,6.62004149453213,6.6947346670253,6.56547892017251,3.61109979439135,7.86998258900597,8.34413859047294,4.95525554313773,7.01715351074956,6.66700298530962,4.33247451110789,4.78429797023588,5.49067615695654,4.07948231985253,4.47844647435706,4.69879910935041,3.81868247206045,6.01038387804157,8.9460565535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| |||
|short_description=p2@Tsc2 | |||
}} |
Latest revision as of 01:40, 26 September 2015
Short description: | p2@Tsc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tsc2_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENSMUST00000088420, ENSMUST00000097373, ENSMUST00000097374, ENSMUST00000115290, ENSMUST00000115291, ENSMUST00000115292, ENSMUST00000115294, ENSMUST00000163283, NM_001039363, NM_011647, uc008awz.1, uc008axa.1, uc008axb.1, uc008axc.1, uc008axd.1, uc008axe.1, uc008axg.1, uc008axh.1_5end |
EntrezGene: | Tsc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 5.79e-14 | 54 |
neural tube | 7.38e-14 | 52 |
neural rod | 7.38e-14 | 52 |
future spinal cord | 7.38e-14 | 52 |
neural keel | 7.38e-14 | 52 |
structure with developmental contribution from neural crest | 1.24e-13 | 92 |
anatomical conduit | 1.39e-13 | 122 |
neurectoderm | 1.72e-13 | 64 |
neural plate | 1.72e-13 | 64 |
presumptive neural plate | 1.72e-13 | 64 |
tube | 1.02e-12 | 114 |
brain | 1.16e-12 | 47 |
future brain | 1.16e-12 | 47 |
ecto-epithelium | 2.98e-12 | 73 |
pre-chordal neural plate | 3.02e-12 | 49 |
regional part of brain | 4.93e-12 | 46 |
ectoderm-derived structure | 7.72e-11 | 95 |
ectoderm | 7.72e-11 | 95 |
presumptive ectoderm | 7.72e-11 | 95 |
central nervous system | 7.83e-11 | 73 |
anterior neural tube | 9.74e-11 | 40 |
regional part of forebrain | 2.14e-10 | 39 |
forebrain | 2.14e-10 | 39 |
future forebrain | 2.14e-10 | 39 |
nervous system | 5.82e-10 | 75 |
gray matter | 5.23e-09 | 34 |
brain grey matter | 1.25e-07 | 29 |
regional part of telencephalon | 1.25e-07 | 29 |
telencephalon | 1.25e-07 | 29 |