FFCP PHASE1:Mm9::chr17:88049905..88049920,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=358|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:88049905..88049920,+|id=chr17:88049905..88049920,+|ontology_enrichment_celltype=CL:0000066!4.00e-13!25;CL:0002076!4.85e-11!15;CL:0002563!4.51e-10!9;CL:0002251!4.51e-10!9;CL:0000223!1.37e-07!20;CL:0000075!1.76e-07!7|ontology_enrichment_celltype_v019_2=CL:0000068,3.87e-13,3;CL:0002202,3.87e-13,3;CL:0000069,3.87e-13,3;CL:0002632,3.87e-13,3;CL:0002368,3.87e-13,3;CL:0000307,3.87e-13,3;CL:0000377,3.87e-13,3;CL:0000682,1.08e-12,3;CL:0000066,1.76e-09,25;CL:0002076,8.91e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!6.61e-24!43;UBERON:0005409!1.51e-20!59;UBERON:0000344!1.98e-19!15;UBERON:0001242!3.42e-16!13;UBERON:0000060!3.42e-16!13;UBERON:0001262!3.42e-16!13;UBERON:0004786!3.42e-16!13;UBERON:0000485!1.42e-12!11;UBERON:0001007!8.23e-12!128;UBERON:0001555!8.23e-12!128;UBERON:0007026!8.23e-12!128;UBERON:0004119!1.87e-11!130;UBERON:0000925!1.87e-11!130;UBERON:0006595!1.87e-11!130;UBERON:0004923!1.27e-10!24;UBERON:0004921!3.11e-10!126;UBERON:0004185!3.11e-10!126;UBERON:0003350!4.51e-10!9;UBERON:0004808!4.51e-10!9;UBERON:0001277!4.51e-10!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.22e-20,31;UBERON:0000344,2.91e-17,15;UBERON:0002108,3.20e-17,4;UBERON:0005409,2.06e-14,47;UBERON:0000331,7.64e-14,3;UBERON:0002116,7.64e-14,3;UBERON:0001204,7.64e-14,3;UBERON:0001168,7.64e-14,3;UBERON:0003126,3.87e-13,3;UBERON:0001005,3.87e-13,3;UBERON:0007196,3.87e-13,3;UBERON:0001558,3.87e-13,3;UBERON:0001242,2.71e-11,13;UBERON:0001262,2.71e-11,13;UBERON:0004786,2.71e-11,13;UBERON:0004923,2.28e-10,24;UBERON:0001962,7.70e-10,2;UBERON:0001961,7.70e-10,2;UBERON:0001744,7.70e-10,2;UBERON:0001007,1.20e-09,116;UBERON:0001555,1.20e-09,116;UBERON:0007026,1.20e-09,116;UBERON:0004119,2.00e-09,118;UBERON:0000925,2.00e-09,118;UBERON:0006595,2.00e-09,118;UBERON:0001155,6.22e-09,2;UBERON:0000059,6.22e-09,2;UBERON:0004921,2.24e-07,114;UBERON:0002465,8.07e-07,3|phase1_expression=0.640595388419176,0,0.454999239389536,0.30246421130683,0.500895729946347,0.839396359559449,0.934450562382103,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,5.91971964335605,8.94696196161963,2.29692785646008,2.58457197695445,1.29282739611533,9.69119439227507,6.80481350351813,3.32595765982957,0,0,0,2.88851619751275,2.32728503501889,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,1.5154372870785,2.78695852022608,4.04419556011827,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.528901133327089,0,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0.949058123089023,0.329397909448022,1.25667604400135,0.397912944082302,1.16978452271472,0,1.08069024937347,2.38969527905241,0,0.114248512609729,0,0.407302655690628,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0.354680467284547,0.178368817602071,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0.523511883968059,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0.342869252385415,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:88049905..88049920,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=358 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:88049905..88049920,+ | |||
|description=CAGE_peak_at_chr17:88049905..88049920,+ | |||
|id=chr17:88049905..88049920,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.00e-13!25;CL:0002076!4.85e-11!15;CL:0002563!4.51e-10!9;CL:0002251!4.51e-10!9;CL:0000223!1.37e-07!20;CL:0000075!1.76e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.87e-13,3;CL:0002202,3.87e-13,3;CL:0000069,3.87e-13,3;CL:0002632,3.87e-13,3;CL:0002368,3.87e-13,3;CL:0000307,3.87e-13,3;CL:0000377,3.87e-13,3;CL:0000682,1.08e-12,3;CL:0000066,1.76e-09,25;CL:0002076,8.91e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.61e-24!43;UBERON:0005409!1.51e-20!59;UBERON:0000344!1.98e-19!15;UBERON:0001242!3.42e-16!13;UBERON:0000060!3.42e-16!13;UBERON:0001262!3.42e-16!13;UBERON:0004786!3.42e-16!13;UBERON:0000485!1.42e-12!11;UBERON:0001007!8.23e-12!128;UBERON:0001555!8.23e-12!128;UBERON:0007026!8.23e-12!128;UBERON:0004119!1.87e-11!130;UBERON:0000925!1.87e-11!130;UBERON:0006595!1.87e-11!130;UBERON:0004923!1.27e-10!24;UBERON:0004921!3.11e-10!126;UBERON:0004185!3.11e-10!126;UBERON:0003350!4.51e-10!9;UBERON:0004808!4.51e-10!9;UBERON:0001277!4.51e-10!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.22e-20,31;UBERON:0000344,2.91e-17,15;UBERON:0002108,3.20e-17,4;UBERON:0005409,2.06e-14,47;UBERON:0000331,7.64e-14,3;UBERON:0002116,7.64e-14,3;UBERON:0001204,7.64e-14,3;UBERON:0001168,7.64e-14,3;UBERON:0003126,3.87e-13,3;UBERON:0001005,3.87e-13,3;UBERON:0007196,3.87e-13,3;UBERON:0001558,3.87e-13,3;UBERON:0001242,2.71e-11,13;UBERON:0001262,2.71e-11,13;UBERON:0004786,2.71e-11,13;UBERON:0004923,2.28e-10,24;UBERON:0001962,7.70e-10,2;UBERON:0001961,7.70e-10,2;UBERON:0001744,7.70e-10,2;UBERON:0001007,1.20e-09,116;UBERON:0001555,1.20e-09,116;UBERON:0007026,1.20e-09,116;UBERON:0004119,2.00e-09,118;UBERON:0000925,2.00e-09,118;UBERON:0006595,2.00e-09,118;UBERON:0001155,6.22e-09,2;UBERON:0000059,6.22e-09,2;UBERON:0004921,2.24e-07,114;UBERON:0002465,8.07e-07,3 | |||
|phase1_expression=0.640595388419176,0,0.454999239389536,0.30246421130683,0.500895729946347,0.839396359559449,0.934450562382103,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,5.91971964335605,8.94696196161963,2.29692785646008,2.58457197695445,1.29282739611533,9.69119439227507,6.80481350351813,3.32595765982957,0,0,0,2.88851619751275,2.32728503501889,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,1.5154372870785,2.78695852022608,4.04419556011827,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.528901133327089,0,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0.949058123089023,0.329397909448022,1.25667604400135,0.397912944082302,1.16978452271472,0,1.08069024937347,2.38969527905241,0,0.114248512609729,0,0.407302655690628,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0.354680467284547,0.178368817602071,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0.523511883968059,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0.342869252385415,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:88049905..88049920,+ | |||
}} |
Latest revision as of 11:36, 5 August 2015
Short description: | p@chr17:88049905..88049920, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:88049905..88049920, + |
Coexpression cluster: | MCL_coexpression_mm9:358 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.87e-13 | 3 |
epithelial cell of tracheobronchial tree | 3.87e-13 | 3 |
branched duct epithelial cell | 3.87e-13 | 3 |
epithelial cell of lower respiratory tract | 3.87e-13 | 3 |
respiratory epithelial cell | 3.87e-13 | 3 |
tracheal epithelial cell | 3.87e-13 | 3 |
tracheoblast | 3.87e-13 | 3 |
M cell of gut | 1.08e-12 | 3 |
epithelial cell | 1.76e-09 | 25 |
endo-epithelial cell | 8.91e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.22e-20 | 31 |
mucosa | 2.91e-17 | 15 |
small intestine | 3.20e-17 | 4 |
gastrointestinal system | 2.06e-14 | 47 |
ileal mucosa | 7.64e-14 | 3 |
ileum | 7.64e-14 | 3 |
mucosa of small intestine | 7.64e-14 | 3 |
wall of small intestine | 7.64e-14 | 3 |
trachea | 3.87e-13 | 3 |
respiratory airway | 3.87e-13 | 3 |
tracheobronchial tree | 3.87e-13 | 3 |
lower respiratory tract | 3.87e-13 | 3 |
intestinal mucosa | 2.71e-11 | 13 |
wall of intestine | 2.71e-11 | 13 |
gastrointestinal system mucosa | 2.71e-11 | 13 |
organ component layer | 2.28e-10 | 24 |
gut-associated lymphoid tissue | 7.70e-10 | 2 |
mucosa-associated lymphoid tissue | 7.70e-10 | 2 |
lymphoid tissue | 7.70e-10 | 2 |
digestive system | 1.20e-09 | 116 |
digestive tract | 1.20e-09 | 116 |
primitive gut | 1.20e-09 | 116 |
endoderm-derived structure | 2.00e-09 | 118 |
endoderm | 2.00e-09 | 118 |
presumptive endoderm | 2.00e-09 | 118 |
colon | 6.22e-09 | 2 |
large intestine | 6.22e-09 | 2 |
subdivision of digestive tract | 2.24e-07 | 114 |
lymphoid system | 8.07e-07 | 3 |