FFCP PHASE1:Hg19::chr5:83016840..83016851,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1404 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2380 | |||
|TSSclassifier=strong | |||
|UniProt=P10915 | |||
|association_with_transcript=44bp_to_NM_001884,uc003kin.2_5end | |||
|cluster_id=chr5:83016840..83016851,- | |||
|coexpression_cluster_id=C4525 | |||
|description=CAGE_peak_3_at_HAPLN1_5end | |||
|id=chr5:83016840..83016851,- | |||
|ontology_enrichment_celltype=CL:0000055!8.04e-29!180;CL:0000057!1.03e-16!75;CL:0002620!1.32e-10!23;CL:0000062!2.72e-09!11;CL:0000375!2.72e-09!11;CL:0000335!2.72e-09!11;CL:0000359!1.46e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000062;3.13e-15;9!CL:0002620;4.48e-13;23!CL:0000138;6.41e-09;6!CL:0000057;3.89e-08;73!CL:0002573;5.29e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.32e-16,76;CL:0000062,2.74e-15,11;CL:0000375,2.74e-15,11;CL:0000335,2.74e-15,11;CL:0002620,3.55e-13,23;CL:0000058,6.37e-09,6;CL:0000138,6.37e-09,6;CL:0002573,5.30e-08,2;CL:0000219,1.85e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000335;2.64e-15;11!UBERON:0005062;3.97e-08;4!UBERON:0007284;3.97e-08;4 | |||
|ontology_enrichment_disease=DOID:17!2.04e-07!5;DOID:450!2.04e-07!5;DOID:66!2.04e-07!5;DOID:423!2.04e-07!5;DOID:0080000!2.04e-07!5;DOID:11722!2.04e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;2.41e-11;5!DOID:450;2.41e-11;5!DOID:66;2.41e-11;5!DOID:423;2.41e-11;5!DOID:0080000;2.41e-11;5!DOID:11722;2.41e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.83e-11,5;DOID:450,1.83e-11,5;DOID:66,1.83e-11,5;DOID:423,1.83e-11,5;DOID:0080000,1.83e-11,5;DOID:11722,1.83e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.71e-08!84;UBERON:0002097!2.63e-07!40;UBERON:0002049!4.44e-07!79;UBERON:0007798!4.44e-07!79;UBERON:0001009!6.79e-07!113;UBERON:0004535!7.01e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;9.63e-09;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,9.91e-11,41;UBERON:0002199,4.34e-09,46;UBERON:0002416,4.34e-09,46 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0.37129905888014,0.331397375727916,0,0.602694528023977,0,0,0.738726348460727,1.42800483870977,0.626909442956176,0.286235987131057,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,2.55725123687061,4.69870898099936,1.00267582127178,3.62116297402059,7.95285947051099,14.1124112387764,0.567208902984407,0.221729397462564,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9515512271251,3.16576279161449,0.264818361626438,1.43418310374407,0.354668382198357,2.80338800071154,5.33744978648525,5.42668606517752,0,0.404132016209064,0.653847612453835,0.302714855289863,1.15235184896,0,0,0,0,0,0,0,0,0.368502951935304,0,3.56400857184616,0.247266929278557,0,0,0.505008341862199,0.125118519871964,0,3.07284334616587,4.29082914118628,1.05166641234618,1.02088964844019,25.6527179035073,6.62027905337559,1.90738711043606,18.6056479572329,5.5648365788757,5.92573242104947,2.41951913231067,4.38818463827292,4.18979122193154,8.58274832429989,5.79914361446486,0.161646056818812,5.68015348026583,1.5112814734146,0.67824236924195,0,0,0,0.365921118388786,0.132529768321485,3.137236457477,0.932949495138334,1.7662459561294,0,0,1.28648187638577,1.38134921352481,4.17931135228781,6.49691533502627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71567810298526,0,0,0,0,0,0,0,0.115930404975077,3.17003474436719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.517086863031111,0,0,0,0,0.257207374262142,2.83698264046557,0,0,2.17048642156577,2.46972101034231,0,0,4.75171123760058,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0.271265023699736,0,0,0.315404830067869,0,3.61135319673263,4.5481500811197,2.0694614258501,18.5983167589922,6.26855173041791,0,0,0,0,0,0,0,0,0.604780586659361,0.744323423456331,23.4796819130736,2.80660094433074,0,6.65219423786715,1.44768529029247,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.0464486822154,19.7197704810205,0,0,9.64103579064957,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0.464845549297286,3.1481234683064,0,0.308033580176089,0,0.869932992075073,0.55597265731176,4.29374660225974,0.372158369359667,0.632758849437452,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0.974853958525138,0,0,0,0,0,5.97095077717098,4.38450885253763,0,0,0.202910376962704,3.40805847909725,0.563391205064483,2.15117028306077,6.28793862483975,0.7133421029625,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,1.39473591775749,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.35527662480906,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,1.22206028986725,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0.61214552326098,0.252746318513952,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.290967049465258,0,1.12990370390266,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98989253361951,2.510468311496,0,0,0,0,0,0,0,2.79282401272254,2.29160424011684,1.43574604915363,0,0,0.446342914883745,0.335917362433631,2.16179930125442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,2.04465626142506,0,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0,0,0,0,0,0,0,0,2.07353103920428,0,0,0,0,0,0,0,0,1.59238355479446,2.80019435264208,2.06037423109676,1.34699795506368,0,0,0.214441591374926,0,0,7.64024165268652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,1.10086159299127,0,0,0,0,0,9.22212616894914,0,0,4.58478726797889,0,0,0,0,0,0.504143392443436,0,0,0,0,0,0,0,4.57658514560601,0,7.55881644041844,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0.496211178389294,4.39678110899052,0,0,0,0,0,0.0887023701626388,0,11.1467206134322,0,0,0,0.444925607568277,0.235479278551542,0,0,0.913158720509496,0,0,0,0,4.06844988788438,0,0,0,0,0,0,9.93988806136749,10.3108219758581,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0.594600453887843,0,0,0,1.00326405540328,0.655678681511872,0,0,0,0.196308467114945,0,0,8.66628284907866,0,0,0,0,0,0,1.46067277649303,0,0,0,0,0.872701380680755,0.5290268405154,1.48798007266701,0.924351257262837,0,0,0,2.15387451719443,0,3.47382626845229,0.18378979906969,0,0,0,0,0,0.426467963801962,8.09419066976717,0,0,0.672791175483681,0,0.202117188958219,0,0,0,0.573777643141411,17.9636592534847,0,0,0,0,7.03922827210363,0,0.406896178315738,0,0,0 | |||
|short_description=p3@HAPLN1 | |||
}} |
Latest revision as of 01:12, 19 September 2015
Short description: | p3@HAPLN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HAPLN1_5end |
Coexpression cluster: | C4525_Fibroblast_Saos2_Chondrocyte_Preadipocyte_Osteoblast_trachea_pleomorphic |
Association with transcript: | 44bp_to_NM_001884, uc003kin.2_5end |
EntrezGene: | HAPLN1 |
HGNC: | 2380 |
UniProt: | P10915 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.32e-16 | 76 |
osteoblast | 2.74e-15 | 11 |
osteoprogenitor cell | 2.74e-15 | 11 |
mesenchyme condensation cell | 2.74e-15 | 11 |
skin fibroblast | 3.55e-13 | 23 |
chondroblast | 6.37e-09 | 6 |
chondrocyte | 6.37e-09 | 6 |
Schwann cell | 5.30e-08 | 2 |
motile cell | 1.85e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
skin of body | 9.91e-11 | 41 |
integument | 4.34e-09 | 46 |
integumental system | 4.34e-09 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.83e-11 | 5 |
myotonic disease | 1.83e-11 | 5 |
muscle tissue disease | 1.83e-11 | 5 |
myopathy | 1.83e-11 | 5 |
muscular disease | 1.83e-11 | 5 |
myotonic dystrophy | 1.83e-11 | 5 |