FFCP PHASE1:Mm9::chr18:80452022..80452039,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=66943|HGNC=|MCL_coexpression_id=3|UniProt=Q80XM9|association_with_transcript=38bp_to_ENSMUST00000123750,NM_001164420,uc008fsv.2_5end|description=CAGE_peak_6_at_Pqlc1_5end|id=chr18:80452022..80452039,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000557,2.17e-09,7;CL:0002092,6.32e-07,3;CL:0002540,6.32e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,5.08e-07,3;DOID:4045,5.08e-07,3|ontology_enrichment_uberon=UBERON:0002371!1.38e-07!16;UBERON:0002204!1.81e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.12e-10,16;UBERON:0002204,1.24e-08,32;UBERON:0001474,3.62e-08,22;UBERON:0004765,3.62e-08,22;UBERON:0001434,3.62e-08,22|phase1_expression=0,0.348975407639361,1.36499771816861,0,0,2.01455126294268,1.63528848416868,0,0.563154888606667,0.936258105287974,0,0,0.171200729931206,0.174840804837995,0.333109761815663,0.809901069559304,0.699561878128147,0.315462165358238,0.685572168028694,1.27316895539409,0.340173160604279,1.58865521921416,0.783599367416806,1.43993180514066,1.60586496747019,2.29692785646008,1.29228598847722,0.646413698057667,1.52018735565099,0,2.21730510655305,0,0,0,0.288851619751275,0.332469290716985,0.612508068787107,20.0895182753716,4.6880120671428,12.5645698553712,20.5881020810855,12.9778642142105,24.7610280045888,0,0.101376931219515,0.917733760808408,0,0,0,0,0,0,1.17447824240415,0,0.336093799142464,0.514518872071894,0,0.515672092277442,0,0,0,0,0,5.84934816232909,5.93319817540185,5.6838409195688,1.19840044207362,0,0,0,0.420649922702764,0,0,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0,0,0.302904773332736,0.302286240427142,2.89864488701678,0,2.03991400112325,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,1.29894624606728,1.52015919285059,1.01104889002957,0.68510327831436,0,0.445326417194474,0.173485326766136,0,0.230615497256059,0.301445281105245,0.117588707135705,0,0.247194967734374,0,1.76922110389975,0.323533699894818,0.883366073841574,0,3.72783522436244,0,0,0.510914110417183,2.03685711660064,0.599902730993408,2.54140454146129,0.149790639404823,0,0,0,0.255715457330331,0,0,0,0.746441823660558,0,0.420883711772948,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,2.1066395619397,2.83082697826187,5.11494298912067,0,0.469052119962192,0,0.473489471170421,0.393528463494808,0.154267112887378,0,0,0,0.16455984991348,0.32833492815819,0.0810688095458557,0.146199987425332,0,0,0,0,0,0.264450566663544,0,0,0,0.605050573870028,0.22237804384487,0.380451252225118,0,0,0.251335208800269,0.596869416123452,0.58489226135736,0,0.864552199498777,0.398282546508734,0,0,1.1270773567308,0.203651327845314,0,0.280543279561274,0.316182685621286,0,0.156998727841375,0.123397163921801,0,0.500535317148282,0.196558995113203,0.674586337154561,0.405720242777006,0.241177159752417,0.25462585178142,0.287696137450811,0.810676133875177,0.274561413188081,0,0.744281895337007,0,0,0.179397413521912,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0.335012514883631,0.714130922658041,0.390267295715598,0.157635144106191,0.44292937929755,0.478364305972461,0.491589944147214,0.345369963731791,0.289298117163023,12.0633027151418,4.35124547054968,0.983528546038072,0.551873492609465,0.160550589987792,0,0,0.504941854408746,0,0,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0,0,0,0.567760340833074,0.712262414669021,0.325773918707152,0.164970122972535,1.32745138339963,0,0.604647113929502,2.07465587731488,2.06711325016541,1.53717573971964,0.258428293168221,0,1.06949213515416,0.948110273807448,1.05418608574999,2.06271086496374,0.340439605753788,0,0.258717367565509,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0.65954501176592,0.161464426695906,0.0603129249281559,0.119372344003136,0.656563598980245,0.582961673259701,0,0.512612642393558,0,0.555583582109135,0.376736914009382,0.410082683163076,0.228778173206523,0.339956859987711,2.23922323717853,1.38199973804424,3.81868247206045,0,0.203319467126849,0.324016022465404,0.209088296014469,1.09181281873089,1.07891477107857,0.41326727862668,3.40282724579238,1.16653475962614,0.621339313086926,0,0.299033092087958,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0.201932899896295,0.0762068066549998,0.201652370273681,0.0974578807397524,0.192423683280659,0.116876902181569,0.680191150845634,0.221985953374065,0.448569283047378,0.335769232728157,0,0.563047426353546,1.09890974560359,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.486213434136588,0,0,0,0,0,0,0.25347929989024,0,0.280924522409647,0.192075457214608,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.407412341537585,0,0.355905054372522,0,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0.429742108096597,0.191288332068843,0.441182838239031,0|short_description=p6@Pqlc1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66943 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=Q80XM9 | |||
|association_with_transcript=38bp_to_ENSMUST00000123750,NM_001164420,uc008fsv.2_5end | |||
|cluster_id=chr18:80452022..80452039,+ | |||
|description=CAGE_peak_6_at_Pqlc1_5end | |||
|id=chr18:80452022..80452039,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,2.17e-09,7;CL:0002092,6.32e-07,3;CL:0002540,6.32e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.08e-07,3;DOID:4045,5.08e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.38e-07!16;UBERON:0002204!1.81e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.12e-10,16;UBERON:0002204,1.24e-08,32;UBERON:0001474,3.62e-08,22;UBERON:0004765,3.62e-08,22;UBERON:0001434,3.62e-08,22 | |||
|phase1_expression=0,0.348975407639361,1.36499771816861,0,0,2.01455126294268,1.63528848416868,0,0.563154888606667,0.936258105287974,0,0,0.171200729931206,0.174840804837995,0.333109761815663,0.809901069559304,0.699561878128147,0.315462165358238,0.685572168028694,1.27316895539409,0.340173160604279,1.58865521921416,0.783599367416806,1.43993180514066,1.60586496747019,2.29692785646008,1.29228598847722,0.646413698057667,1.52018735565099,0,2.21730510655305,0,0,0,0.288851619751275,0.332469290716985,0.612508068787107,20.0895182753716,4.6880120671428,12.5645698553712,20.5881020810855,12.9778642142105,24.7610280045888,0,0.101376931219515,0.917733760808408,0,0,0,0,0,0,1.17447824240415,0,0.336093799142464,0.514518872071894,0,0.515672092277442,0,0,0,0,0,5.84934816232909,5.93319817540185,5.6838409195688,1.19840044207362,0,0,0,0.420649922702764,0,0,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0,0,0.302904773332736,0.302286240427142,2.89864488701678,0,2.03991400112325,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,1.29894624606728,1.52015919285059,1.01104889002957,0.68510327831436,0,0.445326417194474,0.173485326766136,0,0.230615497256059,0.301445281105245,0.117588707135705,0,0.247194967734374,0,1.76922110389975,0.323533699894818,0.883366073841574,0,3.72783522436244,0,0,0.510914110417183,2.03685711660064,0.599902730993408,2.54140454146129,0.149790639404823,0,0,0,0.255715457330331,0,0,0,0.746441823660558,0,0.420883711772948,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,2.1066395619397,2.83082697826187,5.11494298912067,0,0.469052119962192,0,0.473489471170421,0.393528463494808,0.154267112887378,0,0,0,0.16455984991348,0.32833492815819,0.0810688095458557,0.146199987425332,0,0,0,0,0,0.264450566663544,0,0,0,0.605050573870028,0.22237804384487,0.380451252225118,0,0,0.251335208800269,0.596869416123452,0.58489226135736,0,0.864552199498777,0.398282546508734,0,0,1.1270773567308,0.203651327845314,0,0.280543279561274,0.316182685621286,0,0.156998727841375,0.123397163921801,0,0.500535317148282,0.196558995113203,0.674586337154561,0.405720242777006,0.241177159752417,0.25462585178142,0.287696137450811,0.810676133875177,0.274561413188081,0,0.744281895337007,0,0,0.179397413521912,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0.335012514883631,0.714130922658041,0.390267295715598,0.157635144106191,0.44292937929755,0.478364305972461,0.491589944147214,0.345369963731791,0.289298117163023,12.0633027151418,4.35124547054968,0.983528546038072,0.551873492609465,0.160550589987792,0,0,0.504941854408746,0,0,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0,0,0,0.567760340833074,0.712262414669021,0.325773918707152,0.164970122972535,1.32745138339963,0,0.604647113929502,2.07465587731488,2.06711325016541,1.53717573971964,0.258428293168221,0,1.06949213515416,0.948110273807448,1.05418608574999,2.06271086496374,0.340439605753788,0,0.258717367565509,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0.65954501176592,0.161464426695906,0.0603129249281559,0.119372344003136,0.656563598980245,0.582961673259701,0,0.512612642393558,0,0.555583582109135,0.376736914009382,0.410082683163076,0.228778173206523,0.339956859987711,2.23922323717853,1.38199973804424,3.81868247206045,0,0.203319467126849,0.324016022465404,0.209088296014469,1.09181281873089,1.07891477107857,0.41326727862668,3.40282724579238,1.16653475962614,0.621339313086926,0,0.299033092087958,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0.201932899896295,0.0762068066549998,0.201652370273681,0.0974578807397524,0.192423683280659,0.116876902181569,0.680191150845634,0.221985953374065,0.448569283047378,0.335769232728157,0,0.563047426353546,1.09890974560359,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.486213434136588,0,0,0,0,0,0,0.25347929989024,0,0.280924522409647,0.192075457214608,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.407412341537585,0,0.355905054372522,0,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0.429742108096597,0.191288332068843,0.441182838239031,0 | |||
|short_description=p6@Pqlc1 | |||
}} |
Latest revision as of 18:34, 1 October 2015
Short description: | p6@Pqlc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Pqlc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 38bp_to_ENSMUST00000123750, NM_001164420, uc008fsv.2_5end |
EntrezGene: | Pqlc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 2.17e-09 | 7 |
bone marrow cell | 6.32e-07 | 3 |
mesenchymal stem cell of the bone marrow | 6.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.12e-10 | 16 |
musculoskeletal system | 1.24e-08 | 32 |
bone element | 3.62e-08 | 22 |
skeletal element | 3.62e-08 | 22 |
skeletal system | 3.62e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.08e-07 | 3 |
muscle cancer | 5.08e-07 | 3 |