FFCP PHASE1:Mm9::chr19:60019499..60019541,-: Difference between revisions
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{{FFCP|EntrezGene=74998|HGNC=|MCL_coexpression_id=60|UniProt=G3UW57,Q5HZI0|association_with_transcript=15bp_to_ENSMUST00000171986,NM_001164367,uc008ibm.1_5end|description=CAGE_peak_2_at_Rab11fip2_5end|id=chr19:60019499..60019541,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.69e-12!63;UBERON:0004121!4.88e-12!102;UBERON:0000924!4.88e-12!102;UBERON:0006601!4.88e-12!102;UBERON:0000955!1.18e-11!50;UBERON:0006238!1.18e-11!50;UBERON:0001049!2.46e-11!52;UBERON:0005068!2.46e-11!52;UBERON:0006241!2.46e-11!52;UBERON:0007135!2.46e-11!52;UBERON:0002616!3.42e-11!49;UBERON:0001017!3.73e-11!73;UBERON:0005743!3.73e-11!73;UBERON:0002020!6.99e-11!34;UBERON:0003056!1.25e-10!49;UBERON:0000073!1.95e-10!75;UBERON:0001016!1.95e-10!75;UBERON:0002346!2.98e-10!71;UBERON:0003075!2.98e-10!71;UBERON:0007284!2.98e-10!71;UBERON:0000153!7.01e-10!94;UBERON:0003080!7.56e-10!40;UBERON:0002791!1.20e-09!29;UBERON:0003528!1.20e-09!29;UBERON:0001893!1.20e-09!29;UBERON:0002780!2.33e-09!39;UBERON:0001890!2.33e-09!39;UBERON:0006240!2.33e-09!39;UBERON:0007811!6.34e-09!86;UBERON:0002021!6.52e-08!10;UBERON:0000411!6.52e-08!10;UBERON:0001950!6.52e-08!10;UBERON:0000475!7.28e-08!200;UBERON:0000468!8.83e-08!333;UBERON:0000956!1.39e-07!21;UBERON:0001869!1.39e-07!21;UBERON:0000203!1.39e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0010371,2.90e-14,73;UBERON:0004121,1.51e-13,95;UBERON:0000924,1.51e-13,95;UBERON:0006601,1.51e-13,95;UBERON:0000073,1.60e-12,54;UBERON:0002346,4.47e-12,64;UBERON:0003075,4.47e-12,64;UBERON:0007284,4.47e-12,64;UBERON:0001049,2.45e-11,52;UBERON:0005068,2.45e-11,52;UBERON:0006241,2.45e-11,52;UBERON:0007135,2.45e-11,52;UBERON:0001017,3.71e-11,73;UBERON:0002020,6.94e-11,34;UBERON:0003056,1.24e-10,49;UBERON:0001016,1.94e-10,75;UBERON:0000955,2.90e-10,47;UBERON:0006238,2.90e-10,47;UBERON:0003080,7.51e-10,40;UBERON:0002616,8.11e-10,46;UBERON:0003528,1.19e-09,29;UBERON:0002791,1.19e-09,29;UBERON:0001893,1.19e-09,29;UBERON:0002780,2.31e-09,39;UBERON:0001890,2.31e-09,39;UBERON:0006240,2.31e-09,39;UBERON:0002021,6.49e-08,10;UBERON:0000411,6.49e-08,10;UBERON:0001950,6.49e-08,10;UBERON:0000956,1.39e-07,21;UBERON:0001869,1.39e-07,21;UBERON:0000203,1.39e-07,21;UBERON:0010314,7.17e-07,92|phase1_expression=6.08565618998217,0.697950815278722,0.909998478779072,0.30246421130683,1.50268718983904,1.34303417529512,0.934450562382103,9.03863264091034,4.50523910885334,1.87251621057595,1.88339765048055,2.23362045186942,6.50562773738582,6.29426897416781,3.33109761815663,2.22722794128809,0.699561878128147,5.67831897644828,10.6949258212476,4.2438965179803,12.161190491603,3.17731043842833,3.13439746966722,0.799962113967033,0.68822784320151,0.57423196411502,0,0.861884930743556,0.380046838912748,0.504060259519861,1.33038306393183,0,0,0,1.73310971850765,0.498703936075477,1.02084678131185,2.92972141515835,0,0.523523743973798,2.35292595212406,1.36609096991689,0,8.05739635043695,6.38674666682942,11.5634453861859,2.34717403304412,1.52617609466313,3.73466510648602,5.05517737593137,1.81982348112971,4.31257693094915,3.6912173332702,4.35217285206807,6.04968838456435,4.3734104126111,8.5960031981627,5.67239301505187,11.1274053472779,8.46385566835253,10.1413024560989,1.0165335962074,2.66788438833342,0.449949858640699,0,0,2.09720077362883,4.61061966385865,11.6132365785495,9.31540974488665,9.04397333810943,8.2838785477103,6.40518768759679,8.69684674426174,5.55903731905771,5.51531271966013,13.2139057199266,18.0039146700115,16.4358990584181,9.23204014111357,8.87430142943374,10.939180781692,10.8881369610539,9.00420176050688,12.071061574368,16.7938293719991,15.9456282494995,14.5391567743734,3.48340489332647,4.83657984683427,6.66688324013859,3.44169550792555,1.3599426674155,3.77792234146472,5.19821133958135,6.72040330646003,5.61777680527007,4.77204903218562,4.1565760736459,6.36011234118612,7.88723150749411,8.98285341900225,20.3844191765317,21.3320010945999,6.27824018932521,4.30711771307668,5.05524445014783,7.07940054258172,7.25026074212081,7.86743337043571,5.03107447621794,3.95805121805784,4.38169444786511,4.06951129492081,5.29149182110672,5.6549966098354,5.19109432242185,13.4477401935518,4.42305275974937,7.44127509758082,4.85851340612866,6.78825354389311,1.86391761218122,14.9318206475889,12.7762491156208,2.55457055208591,2.15667224110656,0.599902730993408,1.39777249780371,16.926342252745,16.0125210986519,11.8115090986093,22.2495129846114,20.4572365864264,14.7529511637288,12.9793010454206,17.9237280376557,8.8328949133166,17.1851475734899,9.46988351489133,5.07469727554544,4.82794419310293,5.04173963454978,9.34369870581433,13.6753363294169,10.249097622788,13.0245397138023,11.9003550539947,4.095791865724,9.26619792822314,7.5658983390498,9.86380795924087,12.7901734643775,9.4028084960985,10.4948889568051,10.7478504081986,0.702213187313235,0.257347907114715,1.42081749697796,3.72826390563903,4.22146907965973,3.42117916775928,3.78791576936336,4.72234156193769,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74998 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=G3UW57,Q5HZI0 | |||
|association_with_transcript=15bp_to_ENSMUST00000171986,NM_001164367,uc008ibm.1_5end | |||
|cluster_id=chr19:60019499..60019541,- | |||
|description=CAGE_peak_2_at_Rab11fip2_5end | |||
|id=chr19:60019499..60019541,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.69e-12!63;UBERON:0004121!4.88e-12!102;UBERON:0000924!4.88e-12!102;UBERON:0006601!4.88e-12!102;UBERON:0000955!1.18e-11!50;UBERON:0006238!1.18e-11!50;UBERON:0001049!2.46e-11!52;UBERON:0005068!2.46e-11!52;UBERON:0006241!2.46e-11!52;UBERON:0007135!2.46e-11!52;UBERON:0002616!3.42e-11!49;UBERON:0001017!3.73e-11!73;UBERON:0005743!3.73e-11!73;UBERON:0002020!6.99e-11!34;UBERON:0003056!1.25e-10!49;UBERON:0000073!1.95e-10!75;UBERON:0001016!1.95e-10!75;UBERON:0002346!2.98e-10!71;UBERON:0003075!2.98e-10!71;UBERON:0007284!2.98e-10!71;UBERON:0000153!7.01e-10!94;UBERON:0003080!7.56e-10!40;UBERON:0002791!1.20e-09!29;UBERON:0003528!1.20e-09!29;UBERON:0001893!1.20e-09!29;UBERON:0002780!2.33e-09!39;UBERON:0001890!2.33e-09!39;UBERON:0006240!2.33e-09!39;UBERON:0007811!6.34e-09!86;UBERON:0002021!6.52e-08!10;UBERON:0000411!6.52e-08!10;UBERON:0001950!6.52e-08!10;UBERON:0000475!7.28e-08!200;UBERON:0000468!8.83e-08!333;UBERON:0000956!1.39e-07!21;UBERON:0001869!1.39e-07!21;UBERON:0000203!1.39e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,2.90e-14,73;UBERON:0004121,1.51e-13,95;UBERON:0000924,1.51e-13,95;UBERON:0006601,1.51e-13,95;UBERON:0000073,1.60e-12,54;UBERON:0002346,4.47e-12,64;UBERON:0003075,4.47e-12,64;UBERON:0007284,4.47e-12,64;UBERON:0001049,2.45e-11,52;UBERON:0005068,2.45e-11,52;UBERON:0006241,2.45e-11,52;UBERON:0007135,2.45e-11,52;UBERON:0001017,3.71e-11,73;UBERON:0002020,6.94e-11,34;UBERON:0003056,1.24e-10,49;UBERON:0001016,1.94e-10,75;UBERON:0000955,2.90e-10,47;UBERON:0006238,2.90e-10,47;UBERON:0003080,7.51e-10,40;UBERON:0002616,8.11e-10,46;UBERON:0003528,1.19e-09,29;UBERON:0002791,1.19e-09,29;UBERON:0001893,1.19e-09,29;UBERON:0002780,2.31e-09,39;UBERON:0001890,2.31e-09,39;UBERON:0006240,2.31e-09,39;UBERON:0002021,6.49e-08,10;UBERON:0000411,6.49e-08,10;UBERON:0001950,6.49e-08,10;UBERON:0000956,1.39e-07,21;UBERON:0001869,1.39e-07,21;UBERON:0000203,1.39e-07,21;UBERON:0010314,7.17e-07,92 | |||
|phase1_expression=6.08565618998217,0.697950815278722,0.909998478779072,0.30246421130683,1.50268718983904,1.34303417529512,0.934450562382103,9.03863264091034,4.50523910885334,1.87251621057595,1.88339765048055,2.23362045186942,6.50562773738582,6.29426897416781,3.33109761815663,2.22722794128809,0.699561878128147,5.67831897644828,10.6949258212476,4.2438965179803,12.161190491603,3.17731043842833,3.13439746966722,0.799962113967033,0.68822784320151,0.57423196411502,0,0.861884930743556,0.380046838912748,0.504060259519861,1.33038306393183,0,0,0,1.73310971850765,0.498703936075477,1.02084678131185,2.92972141515835,0,0.523523743973798,2.35292595212406,1.36609096991689,0,8.05739635043695,6.38674666682942,11.5634453861859,2.34717403304412,1.52617609466313,3.73466510648602,5.05517737593137,1.81982348112971,4.31257693094915,3.6912173332702,4.35217285206807,6.04968838456435,4.3734104126111,8.5960031981627,5.67239301505187,11.1274053472779,8.46385566835253,10.1413024560989,1.0165335962074,2.66788438833342,0.449949858640699,0,0,2.09720077362883,4.61061966385865,11.6132365785495,9.31540974488665,9.04397333810943,8.2838785477103,6.40518768759679,8.69684674426174,5.55903731905771,5.51531271966013,13.2139057199266,18.0039146700115,16.4358990584181,9.23204014111357,8.87430142943374,10.939180781692,10.8881369610539,9.00420176050688,12.071061574368,16.7938293719991,15.9456282494995,14.5391567743734,3.48340489332647,4.83657984683427,6.66688324013859,3.44169550792555,1.3599426674155,3.77792234146472,5.19821133958135,6.72040330646003,5.61777680527007,4.77204903218562,4.1565760736459,6.36011234118612,7.88723150749411,8.98285341900225,20.3844191765317,21.3320010945999,6.27824018932521,4.30711771307668,5.05524445014783,7.07940054258172,7.25026074212081,7.86743337043571,5.03107447621794,3.95805121805784,4.38169444786511,4.06951129492081,5.29149182110672,5.6549966098354,5.19109432242185,13.4477401935518,4.42305275974937,7.44127509758082,4.85851340612866,6.78825354389311,1.86391761218122,14.9318206475889,12.7762491156208,2.55457055208591,2.15667224110656,0.599902730993408,1.39777249780371,16.926342252745,16.0125210986519,11.8115090986093,22.2495129846114,20.4572365864264,14.7529511637288,12.9793010454206,17.9237280376557,8.8328949133166,17.1851475734899,9.46988351489133,5.07469727554544,4.82794419310293,5.04173963454978,9.34369870581433,13.6753363294169,10.249097622788,13.0245397138023,11.9003550539947,4.095791865724,9.26619792822314,7.5658983390498,9.86380795924087,12.7901734643775,9.4028084960985,10.4948889568051,10.7478504081986,0.702213187313235,0.257347907114715,1.42081749697796,3.72826390563903,4.22146907965973,3.42117916775928,3.78791576936336,4.72234156193769,4.16521204795921,3.48800917125612,3.48755421819505,5.60473643362414,4.77223564749093,4.76085645829376,9.32291309777341,4.82459958503597,7.90380415047782,6.84452735677896,20.6084149592845,18.9344486777883,1.65209391491899,1.58670339998127,3.62590025909898,6.0381534683714,3.73715637834071,5.44545516483025,3.55804870151792,2.85338439168839,3.32170343081158,3.62337700392824,6.28338022000674,4.57599885694647,4.28920991662064,5.39291645192533,1.94524244887225,3.98282546508734,2.46568271239006,6.16941968092536,4.50830942692322,9.57161240872977,8.53390943537553,10.5905088034381,12.2046516649817,10.9231509504906,11.7749045881031,9.25478729413504,5.92905254174298,2.66952169145751,2.35870794135844,2.02375901146368,1.01430060694251,2.17059443777175,2.29163266603278,1.43848068725405,4.05338066937588,1.92192989231657,2.87536413054709,3.34926852901653,4.68056509671841,7.07220858251913,4.4849353380478,8.20153986317724,15.1497615936616,5.11626811780309,3.25929952884052,4.75286240170527,6.80601720036656,7.87279409976534,8.33152743101048,12.8788207586147,11.3497303756458,11.9590932410338,10.5240147313941,14.2561083802692,16.2323882953942,13.4523624480806,1.50791283939272,1.63171705145613,16.7199852826472,19.0396354950265,11.8807436590966,9.72856998715286,7.54100748732707,7.06918596172244,6.31016438832513,5.0757036758563,9.69405289797595,4.30143836314594,7.79795359288379,9.34152551603147,9.31064613852257,7.59865230569411,4.74345333535828,15.7447445046685,13.9101283504103,8.01295216502649,16.6144698540648,28.3748611512761,10.619611067197,4.61283208694465,5.74414758233027,4.90373207365335,4.13422650033082,7.99331384654211,6.97756391554197,6.18007340111759,8.19943970284859,9.16506598013866,10.5418608574999,5.15677716240934,13.6175842301515,6.12207719706455,1.94038025674132,6.21577401591618,9.3990323830405,8.38333442729732,8.55654907131029,3.95804433848979,3.05073220482823,8.26145076368899,3.74898276693435,19.1268053412117,16.4693715229824,10.6150747873554,5.96861720015682,9.02774948597837,3.78925087618806,9.6421157045465,2.73393409276564,4.95328483111734,3.1483069652851,4.1441060541032,3.69074414846768,1.60144721244566,2.37969801991397,3.07893195112048,3.86959926652387,0.954670618015114,3.63786392618306,5.48962561242491,5.07625101862466,7.94535524854981,5.24070152990826,5.12484516262319,7.85207829390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| |||
|short_description=p2@Rab11fip2 | |||
}} |
Latest revision as of 02:13, 26 September 2015
Short description: | p2@Rab11fip2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rab11fip2_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 15bp_to_ENSMUST00000171986, NM_001164367, uc008ibm.1_5end |
EntrezGene: | Rab11fip2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 2.90e-14 | 73 |
ectoderm-derived structure | 1.51e-13 | 95 |
ectoderm | 1.51e-13 | 95 |
presumptive ectoderm | 1.51e-13 | 95 |
regional part of nervous system | 1.60e-12 | 54 |
neurectoderm | 4.47e-12 | 64 |
neural plate | 4.47e-12 | 64 |
presumptive neural plate | 4.47e-12 | 64 |
neural tube | 2.45e-11 | 52 |
neural rod | 2.45e-11 | 52 |
future spinal cord | 2.45e-11 | 52 |
neural keel | 2.45e-11 | 52 |
central nervous system | 3.71e-11 | 73 |
gray matter | 6.94e-11 | 34 |
pre-chordal neural plate | 1.24e-10 | 49 |
nervous system | 1.94e-10 | 75 |
brain | 2.90e-10 | 47 |
future brain | 2.90e-10 | 47 |
anterior neural tube | 7.51e-10 | 40 |
regional part of brain | 8.11e-10 | 46 |
brain grey matter | 1.19e-09 | 29 |
regional part of telencephalon | 1.19e-09 | 29 |
telencephalon | 1.19e-09 | 29 |
regional part of forebrain | 2.31e-09 | 39 |
forebrain | 2.31e-09 | 39 |
future forebrain | 2.31e-09 | 39 |
occipital lobe | 6.49e-08 | 10 |
visual cortex | 6.49e-08 | 10 |
neocortex | 6.49e-08 | 10 |
cerebral cortex | 1.39e-07 | 21 |
cerebral hemisphere | 1.39e-07 | 21 |
pallium | 1.39e-07 | 21 |
structure with developmental contribution from neural crest | 7.17e-07 | 92 |