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FFCP PHASE1:Mm9::chr1:170362040..170362113,-: Difference between revisions

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{{FFCP|EntrezGene=18514|HGNC=|MCL_coexpression_id=1744|UniProt=P41778|association_with_transcript=186bp_to_ENSMUST00000072863_5end|description=CAGE_peak_2_at_Pbx1_5end|id=chr1:170362040..170362113,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!2.64e-10!49;UBERON:0002346!2.76e-10!71;UBERON:0003075!2.76e-10!71;UBERON:0007284!2.76e-10!71;UBERON:0000468!9.13e-10!333;UBERON:0004121!9.13e-09!102;UBERON:0000924!9.13e-09!102;UBERON:0006601!9.13e-09!102;UBERON:0002780!9.70e-09!39;UBERON:0001890!9.70e-09!39;UBERON:0006240!9.70e-09!39;UBERON:0002020!1.11e-08!34;UBERON:0000033!1.20e-08!63;UBERON:0001017!1.26e-08!73;UBERON:0005743!1.26e-08!73;UBERON:0003080!1.53e-08!40;UBERON:0000922!2.22e-08!328;UBERON:0002791!2.41e-08!29;UBERON:0003528!2.41e-08!29;UBERON:0001893!2.41e-08!29;UBERON:0000956!5.44e-08!21;UBERON:0001869!5.44e-08!21;UBERON:0000203!5.44e-08!21;UBERON:0000073!9.40e-08!75;UBERON:0001016!9.40e-08!75;UBERON:0000955!1.76e-07!50;UBERON:0006238!1.76e-07!50;UBERON:0001049!2.31e-07!52;UBERON:0005068!2.31e-07!52;UBERON:0006241!2.31e-07!52;UBERON:0007135!2.31e-07!52;UBERON:0002616!5.47e-07!49;UBERON:0000025!8.47e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.59e-12,92;UBERON:0003056,2.27e-10,49;UBERON:0002346,3.30e-09,64;UBERON:0003075,3.30e-09,64;UBERON:0007284,3.30e-09,64;UBERON:0002780,8.55e-09,39;UBERON:0001890,8.55e-09,39;UBERON:0006240,8.55e-09,39;UBERON:0002020,9.82e-09,34;UBERON:0001017,1.12e-08,73;UBERON:0003080,1.35e-08,40;UBERON:0003528,2.14e-08,29;UBERON:0002791,2.14e-08,29;UBERON:0001893,2.14e-08,29;UBERON:0000956,4.86e-08,21;UBERON:0001869,4.86e-08,21;UBERON:0000203,4.86e-08,21;UBERON:0010371,6.13e-08,73;UBERON:0000955,8.68e-08,47;UBERON:0006238,8.68e-08,47;UBERON:0000922,9.12e-08,320;UBERON:0001016,1.11e-07,75;UBERON:0000073,1.53e-07,54;UBERON:0004121,1.68e-07,95;UBERON:0000924,1.68e-07,95;UBERON:0006601,1.68e-07,95;UBERON:0001049,2.09e-07,52;UBERON:0005068,2.09e-07,52;UBERON:0006241,2.09e-07,52;UBERON:0007135,2.09e-07,52;UBERON:0002616,2.83e-07,46;UBERON:0000025,8.55e-07,114|phase1_expression=12.1713123799643,0,0,0,0,0.503637815735669,1.40167584357315,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0.42438965179803,7.22867966284093,0,0,0.95995453676044,0.22940928106717,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0.866554859253824,0.332469290716985,0.408338712524738,3.34825304589526,0.7813353445238,1.57057123192139,1.76469446409304,3.41522742479223,2.91306211818692,19.8916972401412,16.4230628575614,13.9495531642878,4.69434806608824,6.97680500417429,4.83309602015838,3.30530828426282,3.63964696225943,4.31257693094915,0,0,0,3.34437266846731,4.29800159908135,5.67239301505187,22.4571271554154,30.6814767977779,22.1840991227163,6.09920157724438,1.77858959222228,0.899899717281399,0,0.7104801149461,2.39680088414724,4.99483796918021,30.381056406384,33.616478644591,22.7150958259493,9.14083150092171,10.1599528837742,24.9881230398506,23.2904494574314,25.7381260250806,5.50579404996943,9.44886301830389,6.14426133024974,19.9148294472593,18.1145534332771,19.7947080811569,3.07101298901519,3.37657566019008,5.19514042441154,14.4368006882097,11.6744778255264,11.183966749518,0.605809546665472,0.604572480854284,4.05810284182349,0,0,0.539703191637817,1.94932925234301,1.34408066129201,1.54488862144927,4.4311883870295,1.29893002301434,1.41335829804136,9.57735254481427,6.41632387071589,12.7402619853323,0,2.81438353314578,3.80039798212648,3.0331466700887,0.91347103775248,1.8125651855302,6.82833839698194,13.8788261412909,15.2232739156071,13.8369298353635,11.9070886036572,16.9327738275415,6.78599593180248,2.96633961281249,1.87979163995885,0.884610551949874,3.07357014900077,2.42925670306433,2.42437626567611,1.86391761218122,3.51336956413857,7.74952815209784,1.02182822083437,0.599075622529601,0.599902730993408,1.01656181658452,5.69204429738326,6.8625090422794,29.4031183944103,14.4274185759589,16.1100738118108,6.64921742590592,7.62533936418461,30.5518091550949,1.99051152976149,1.26361379216837,2.31486041475121,17.6963802429277,14.7137346837423,18.7264614997563,16.2761203262572,15.8525043022594,18.8327168818729,12.2749259173245,6.72628763921441,10.3472636607764,19.0997140969497,15.1317966780996,10.7405908889512,10.2877482213471,3.83077383174383,10.4948889568051,30.4522428232295,0,0,0,20.9197030260857,18.0585066185444,19.9868888221726,19.6498130535725,20.8570085652248,16.5065810789495,15.5797742982773,13.1453966685813,12.37712629092,7.89887279584706,10.0142153088248,4.9451973822972,3.80119967305864,3.51280184465681,2.28150911892632,15.7717461423095,20.7867317006155,0,0.528901133327089,27.3008960685099,31.3519507011592,17.2682398171605,13.1094291005173,8.45036566610507,4.75564065281398,1.42358718463353,6.0938613247884,5.7807098024062,5.96869416123452,4.48417400373976,0.898819408654221,1.29682829924817,1.1948476395262,23.7084876191352,30.2758558415781,29.3040112750009,27.900231914808,26.7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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18514
|HGNC=
|MCL_coexpression_id=1744
|TSSclassifier=NA
|UniProt=P41778
|association_with_transcript=186bp_to_ENSMUST00000072863_5end
|cluster_id=chr1:170362040..170362113,-
|description=CAGE_peak_2_at_Pbx1_5end
|id=chr1:170362040..170362113,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!2.64e-10!49;UBERON:0002346!2.76e-10!71;UBERON:0003075!2.76e-10!71;UBERON:0007284!2.76e-10!71;UBERON:0000468!9.13e-10!333;UBERON:0004121!9.13e-09!102;UBERON:0000924!9.13e-09!102;UBERON:0006601!9.13e-09!102;UBERON:0002780!9.70e-09!39;UBERON:0001890!9.70e-09!39;UBERON:0006240!9.70e-09!39;UBERON:0002020!1.11e-08!34;UBERON:0000033!1.20e-08!63;UBERON:0001017!1.26e-08!73;UBERON:0005743!1.26e-08!73;UBERON:0003080!1.53e-08!40;UBERON:0000922!2.22e-08!328;UBERON:0002791!2.41e-08!29;UBERON:0003528!2.41e-08!29;UBERON:0001893!2.41e-08!29;UBERON:0000956!5.44e-08!21;UBERON:0001869!5.44e-08!21;UBERON:0000203!5.44e-08!21;UBERON:0000073!9.40e-08!75;UBERON:0001016!9.40e-08!75;UBERON:0000955!1.76e-07!50;UBERON:0006238!1.76e-07!50;UBERON:0001049!2.31e-07!52;UBERON:0005068!2.31e-07!52;UBERON:0006241!2.31e-07!52;UBERON:0007135!2.31e-07!52;UBERON:0002616!5.47e-07!49;UBERON:0000025!8.47e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.59e-12,92;UBERON:0003056,2.27e-10,49;UBERON:0002346,3.30e-09,64;UBERON:0003075,3.30e-09,64;UBERON:0007284,3.30e-09,64;UBERON:0002780,8.55e-09,39;UBERON:0001890,8.55e-09,39;UBERON:0006240,8.55e-09,39;UBERON:0002020,9.82e-09,34;UBERON:0001017,1.12e-08,73;UBERON:0003080,1.35e-08,40;UBERON:0003528,2.14e-08,29;UBERON:0002791,2.14e-08,29;UBERON:0001893,2.14e-08,29;UBERON:0000956,4.86e-08,21;UBERON:0001869,4.86e-08,21;UBERON:0000203,4.86e-08,21;UBERON:0010371,6.13e-08,73;UBERON:0000955,8.68e-08,47;UBERON:0006238,8.68e-08,47;UBERON:0000922,9.12e-08,320;UBERON:0001016,1.11e-07,75;UBERON:0000073,1.53e-07,54;UBERON:0004121,1.68e-07,95;UBERON:0000924,1.68e-07,95;UBERON:0006601,1.68e-07,95;UBERON:0001049,2.09e-07,52;UBERON:0005068,2.09e-07,52;UBERON:0006241,2.09e-07,52;UBERON:0007135,2.09e-07,52;UBERON:0002616,2.83e-07,46;UBERON:0000025,8.55e-07,114
|phase1_expression=12.1713123799643,0,0,0,0,0.503637815735669,1.40167584357315,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0.42438965179803,7.22867966284093,0,0,0.95995453676044,0.22940928106717,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0.866554859253824,0.332469290716985,0.408338712524738,3.34825304589526,0.7813353445238,1.57057123192139,1.76469446409304,3.41522742479223,2.91306211818692,19.8916972401412,16.4230628575614,13.9495531642878,4.69434806608824,6.97680500417429,4.83309602015838,3.30530828426282,3.63964696225943,4.31257693094915,0,0,0,3.34437266846731,4.29800159908135,5.67239301505187,22.4571271554154,30.6814767977779,22.1840991227163,6.09920157724438,1.77858959222228,0.899899717281399,0,0.7104801149461,2.39680088414724,4.99483796918021,30.381056406384,33.616478644591,22.7150958259493,9.14083150092171,10.1599528837742,24.9881230398506,23.2904494574314,25.7381260250806,5.50579404996943,9.44886301830389,6.14426133024974,19.9148294472593,18.1145534332771,19.7947080811569,3.07101298901519,3.37657566019008,5.19514042441154,14.4368006882097,11.6744778255264,11.183966749518,0.605809546665472,0.604572480854284,4.05810284182349,0,0,0.539703191637817,1.94932925234301,1.34408066129201,1.54488862144927,4.4311883870295,1.29893002301434,1.41335829804136,9.57735254481427,6.41632387071589,12.7402619853323,0,2.81438353314578,3.80039798212648,3.0331466700887,0.91347103775248,1.8125651855302,6.82833839698194,13.8788261412909,15.2232739156071,13.8369298353635,11.9070886036572,16.9327738275415,6.78599593180248,2.96633961281249,1.87979163995885,0.884610551949874,3.07357014900077,2.42925670306433,2.42437626567611,1.86391761218122,3.51336956413857,7.74952815209784,1.02182822083437,0.599075622529601,0.599902730993408,1.01656181658452,5.69204429738326,6.8625090422794,29.4031183944103,14.4274185759589,16.1100738118108,6.64921742590592,7.62533936418461,30.5518091550949,1.99051152976149,1.26361379216837,2.31486041475121,17.6963802429277,14.7137346837423,18.7264614997563,16.2761203262572,15.8525043022594,18.8327168818729,12.2749259173245,6.72628763921441,10.3472636607764,19.0997140969497,15.1317966780996,10.7405908889512,10.2877482213471,3.83077383174383,10.4948889568051,30.4522428232295,0,0,0,20.9197030260857,18.0585066185444,19.9868888221726,19.6498130535725,20.8570085652248,16.5065810789495,15.5797742982773,13.1453966685813,12.37712629092,7.89887279584706,10.0142153088248,4.9451973822972,3.80119967305864,3.51280184465681,2.28150911892632,15.7717461423095,20.7867317006155,0,0.528901133327089,27.3008960685099,31.3519507011592,17.2682398171605,13.1094291005173,8.45036566610507,4.75564065281398,1.42358718463353,6.0938613247884,5.7807098024062,5.96869416123452,4.48417400373976,0.898819408654221,1.29682829924817,1.1948476395262,23.7084876191352,30.2758558415781,29.3040112750009,27.900231914808,26.7654432291324,23.9163145825986,14.8605862242005,6.9376769550413,6.59394656933774,6.29325536001183,0.889357881261447,4.50481785433454,4.12773889737726,1.34917267430912,2.43432145666204,1.20588579876208,2.29163266603278,3.45235364940973,5.18832725680113,2.47105271869273,35.9420516318386,5.58211421502755,3.43241440426017,1.51547326768267,1.61457672169721,0.482443521363367,5.72734889516475,20.6545638829828,20.3706220552532,22.5760964081,22.0608833391192,18.4256883185997,14.5206620940468,9.75668239288994,14.817703545982,14.1737401375216,8.92946704481928,4.91589944147214,5.00786447411097,5.20736610893442,1.50791283939272,0,0.983528546038072,2.48343071674259,2.0871576698413,3.7507739709505,6.06559297893699,1.26235463602186,5.99465616890888,10.5418460960092,11.2020166821055,11.4705023017225,9.13474563737816,10.190755108398,6.47697122679831,7.89090816360542,13.4397844501818,65.2282272336268,11.639086987078,38.8183015994616,40.2330789603333,20.6212653715669,2.65490276679926,13.110154352369,9.67435382287203,10.5618844663303,5.61073596473468,7.68587869859819,8.5281336745513,7.99774204850512,8.19943970284859,3.16036757935816,3.16255825724996,2.06271086496374,4.42571487479924,18.7263537792563,13.9707378485375,11.7885369267376,11.3497749531055,13.7343989553594,10.0374902567294,9.43841342255258,11.4989136951218,2.33015277950202,3.30792597082443,6.43056386471772,9.84933002845024,6.03129249281559,4.77489376012546,1.47726809770555,3.20628920292836,1.8542530201051,0.683483523191411,14.2406938894624,7.59297562215818,0.565105371014073,0.410082683163076,0.915112692826091,1.01987057996313,2.51912614182584,0.552799895217695,2.86401185404534,18.0311516341247,17.6887936400358,17.38885987231,12.1271211688392,10.4814030598165,7.68726774393478,8.01738520535759,2.6175594198403,0.777689839750757,2.4853572523477,0,21.6798991763769,11.4166358415397,14.7782903141476,16.1449779347164,13.685446164753,15.256441023948,7.94246747548096,3.67007705489988,0.241584120826006,0.864090018773596,0.316011120628178,10.3389859797984,9.65482997349376,3.37794139742267,3.40150721768215,1.98681354781265,0.600977247599844,0.443068581523732,1.41353029927407,1.06689529317,0.806609481094724,0.779663045918019,0.481059208201647,0.701261413089414,1.13365191807606,0,0,0,5.21611903886914,15.5776454624481,11.5385523288377,5.35920947697665,6.01886524842436,22.5900737046827,23.476587061866,20.0513429703789,27.6683623573337,13.0165678756422,12.0863023582352,14.8504950050997,14.4102785031751,14.9536994964788,11.39072685854,26.7771356767176,17.1580695562443,14.000155671839,14.5864030240976,13.2056292455629,12.3175150661509,9.77885602327107,15.4526292929171,9.62757628775446,11.3713745293709,13.1809235942925,12.449338531481,13.6716600906028,13.1891813954031,12.0040130117232,12.859929664643,10.6613579869267,10.6100071255038,16.071350131329,12.217510371155,13.0290315906458,11.7134032065163,14.5446075867866,12.0637525804833,12.1401100735776,11.761430496943,8.59761472502031,9.73357932320019,12.765586701511,9.53941861818155,7.11810108745045,9.65343927280522,11.4584692087513,11.6202630889474,12.9247429357365,13.989392364525,7.95367468714389,11.3881658645598,7.26895661861605,2.20591419119516,3.2461496986859
|short_description=p2@Pbx1
}}

Latest revision as of 18:01, 26 September 2015

Short description:p2@Pbx1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Pbx1_5end
Coexpression cluster:MCL_coexpression_mm9:1744
Association with transcript: 186bp_to_ENSMUST00000072863_5end
EntrezGene:Pbx1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Pbx1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D819.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D916.42
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.95
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.98
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.64
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C322.46
Mouse Granule cells, donor2.CNhs12357.11731-123E330.68
Mouse Granule cells, donor3.CNhs12108.11636-122C722.18
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.10
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D530.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F533.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D922.72
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.16
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D224.99
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F223.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D625.74
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D419.91
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.11
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D819.79
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.20
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.44
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.18
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D76.83
adrenal gland, embryo E14.CNhs11038.406-44C513.88
adrenal gland, embryo E16.CNhs11004.1254-43D615.22
adrenal gland, embryo E17.CNhs11043.1263-45I113.84
adrenal gland, embryo E18.CNhs11026.1262-18F511.91
adrenal gland, neonate N00.CNhs11191.1311-23C116.93
adrenal gland, neonate N25.CNhs11223.1377-27I36.79
amnion, adult pregnant day17.5.CNhs10488.583-22A82.97
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F53.07
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I27.75
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A45.69
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F129.40
cortex, adult.CNhs10473.12-14D514.43
cortex, neonate N30.CNhs11107.1392-42F216.11
diencephalon, adult.CNhs10482.20-12F26.65
diencephalon, neonate N30.CNhs11201.1388-42B27.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B130.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C617.70
eyeball, embryo E14.CNhs10521.399-16E214.71
eyeball, embryo E15.CNhs10593.426-16C918.73
eyeball, embryo E17.CNhs11023.1261-18D416.28
eyeball, neonate N00.CNhs11207.633-15C615.85
eyeball, neonate N01.CNhs11140.1532-43E718.83
eyeball, neonate N02.CNhs11205.1551-44G812.27
eyeball, neonate N16.CNhs11188.777-19A26.73
forelimb, embryo E11.CNhs10596.335-25E210.35
forelimb, embryo E12.CNhs10600.359-14H219.10
forelimb, embryo E13.CNhs10589.384-1E215.13
forelimb, embryo E14.CNhs10577.413-26A810.74
forelimb, embryo E15.CNhs11007.437-20E710.29
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B510.49
gonad, embryo E13.CNhs11044.1564-45I630.45
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E920.92
heart, embryo E12.CNhs11015.353-12F518.06
heart, embryo E13.CNhs11013.376-3I919.99
heart, embryo E14.CNhs10597.403-26D419.65
heart, embryo E15.CNhs11017.431-16C820.86
heart, embryo E16.CNhs11021.457-17C616.51
heart, embryo E17.CNhs11025.479-18E515.58
heart, embryo E18.CNhs11030.1283-20G313.15
heart, neonate N00.CNhs11213.639-21E312.38
heart, neonate N03.CNhs11221.1349-25I27.90
heart, neonate N10.CNhs11118.749-24G110.01
heart, neonate N16.CNhs11209.782-15G14.95
heart, neonate N20.CNhs11127.821-26I63.80
heart, neonate N25.CNhs11196.1351-25D33.51
heart, neonate N30.CNhs11202.1390-42D22.28
hippocampus, adult.CNhs10478.13-16E815.77
hippocampus, neonate N00.CNhs11228.627-43G120.79
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I527.30
intestine, embryo E13.CNhs11010.381-16D531.35
intestine, embryo E15.CNhs10602.976-16D817.27
intestine, embryo E16.CNhs10585.463-22H413.11
intestine, embryo E17.CNhs10582.482-18D38.45
intestine, embryo E18.CNhs10526.1289-20F74.76
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E96.09
intestine, neonate N06.CNhs11102.688-20B85.78
intestine, neonate N07.CNhs11095.720-20F25.97
intestine, neonate N10.CNhs11098.755-23A54.48
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I923.71
kidney, embryo E15.CNhs10997.434-16F830.28
kidney, embryo E16.CNhs10584.464-22A529.30
kidney, embryo E17.CNhs11028.483-18I227.90
kidney, embryo E18.CNhs11001.1288-20C726.77
kidney, neonate N00.CNhs11214.646-21G723.92
kidney, neonate N10.CNhs11206.758-6D514.86
kidney, neonate N20.CNhs11113.832-19I16.94
kidney, neonate N25.CNhs11122.1353-25F36.59
kidney, neonate N30.CNhs11203.1385-42H16.29
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F84.50
liver, embryo E13.CNhs10524.378-3H64.13
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F45.19
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A835.94
liver, neonate N07.CNhs11103.716-20H25.58
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B15.73
lung, embryo E12.CNhs10522.354-16G220.65
lung, embryo E14.CNhs10604.404-26F820.37
lung, embryo E15.CNhs11020.432-17C522.58
lung, embryo E16.CNhs10998.458-17B622.06
lung, embryo E17.CNhs10605.480-44A618.43
lung, embryo E18.CNhs10583.1287-20I614.52
lung, neonate N00.CNhs11224.640-42C69.76
lung, neonate N06.CNhs11212.683-20E514.82
lung, neonate N07.CNhs11111.715-19A314.17
lung, neonate N10.CNhs11219.750-23E68.93
lung, neonate N20.CNhs11109.822-18A44.92
lung, neonate N25.CNhs11119.1359-25C75.01
lung, neonate N30.CNhs11133.1394-42H25.21
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A33.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.07
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.54
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.20
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D711.47
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.19
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.89
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.44
olfactory brain, adult.CNhs10489.18-22I965.23
ovary, adult.CNhs10507.91-2I711.64
ovary, embryo E18.CNhs11040.505-44H738.82
ovary, neonate N00.CNhs11217.1299-22I440.23
oviduct, adult pregnant day01.CNhs10500.988-6G620.62
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F413.11
pancreas, embryo E15.CNhs11042.1556-45F29.67
pancreas, embryo E16.CNhs11003.460-26E510.56
pancreas, embryo E17.CNhs10599.1558-45G35.61
pancreas, embryo E18.CNhs10580.1535-43I77.69
pancreas, neonate N00.CNhs11105.645-26G98.53
pancreas, neonate N01.CNhs11138.1531-43D78.00
pancreas, neonate N02.CNhs11139.1539-43D88.20
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E618.73
pituitary gland, embryo E13.CNhs11009.370-44C713.97
pituitary gland, embryo E14.CNhs11037.398-44A511.79
pituitary gland, embryo E15.CNhs10592.427-16B911.35
pituitary gland, embryo E16.CNhs11036.449-43F613.73
pituitary gland, embryo E17.CNhs11039.1265-44F510.04
pituitary gland, neonate N00.CNhs11190.1308-22E99.44
placenta, adult pregnant day10.CNhs10472.539-13I711.50
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C36.43
skin, neonate N00.CNhs11124.650-25G49.85
skin, neonate N03.CNhs11215.662-22H36.03
skin, neonate N06.CNhs11097.693-20I54.77
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C114.24
spleen, embryo E18.CNhs11011.1271-21F27.59
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E318.03
stomach, embryo E15.CNhs10603.1252-16G817.69
stomach, embryo E16.CNhs11022.459-17D417.39
stomach, embryo E17.CNhs11006.1035-18D512.13
stomach, embryo E18.CNhs10999.1286-20C610.48
stomach, neonate N03.CNhs11193.1340-24B87.69
stomach, neonate N07.CNhs11210.718-18A98.02
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F521.68
testis, embryo E15.CNhs11034.443-27C511.42
testis, embryo E16.CNhs11033.470-26G514.78
testis, embryo E17.CNhs11029.486-18I516.14
testis, embryo E18.CNhs11027.503-18G513.69
testis, neonate N00.CNhs11189.1300-22B715.26
testis, neonate N07.CNhs11222.726-26I47.94
testis, neonate N10.CNhs11204.763-44D93.67
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I410.34
thymus, embryo E15.CNhs11005.430-45I29.65
thymus, embryo E16.CNhs11002.456-26C53.38
thymus, embryo E17.CNhs10581.478-18C13.40
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C41.41
thymus, neonate N07.CNhs11211.713-19D31.07
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E45.22
uterus, adult pregnant day19.CNhs10497.590-15F515.58
uterus, adult.CNhs10509.92-27E511.54
vagina, adult.CNhs10502.89-27D55.36
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.59
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.48
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.05
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D727.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.41
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.95
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.39
whole body, embryo E11.CNhs11014.324-5I826.78
whole body, embryo E12.CNhs10587.857-27C917.16
whole body, embryo E13.CNhs10512.372-23H214.00
whole body, embryo E14.5.CNhs10578.420-27D214.59
whole body, embryo E14.CNhs10519.395-14B113.21
whole body, embryo E16.CNhs10514.453-14F212.32
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G515.45
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.37
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.18
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.54
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.06
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.14
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.60
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.62
whole body, embryo E17.5.CNhs10513.490-9F912.92
whole body, embryo E17.CNhs10517.475-3I513.99
whole body, embryo E18.CNhs10516.493-3B37.95
whole body, neonate N00.CNhs10525.657-19C211.39
whole body, neonate N01.CNhs10576.659-23C67.27
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest7.59e-1292
pre-chordal neural plate2.27e-1049
neurectoderm3.30e-0964
neural plate3.30e-0964
presumptive neural plate3.30e-0964
regional part of forebrain8.55e-0939
forebrain8.55e-0939
future forebrain8.55e-0939
gray matter9.82e-0934
central nervous system1.12e-0873
anterior neural tube1.35e-0840
brain grey matter2.14e-0829
regional part of telencephalon2.14e-0829
telencephalon2.14e-0829
cerebral cortex4.86e-0821
cerebral hemisphere4.86e-0821
pallium4.86e-0821
ecto-epithelium6.13e-0873
brain8.68e-0847
future brain8.68e-0847
embryo9.12e-08320
nervous system1.11e-0775
regional part of nervous system1.53e-0754
ectoderm-derived structure1.68e-0795
ectoderm1.68e-0795
presumptive ectoderm1.68e-0795
neural tube2.09e-0752
neural rod2.09e-0752
future spinal cord2.09e-0752
neural keel2.09e-0752
regional part of brain2.83e-0746
tube8.55e-07114
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