FFCP PHASE1:Mm9::chr1:4486594..4486612,-: Difference between revisions
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{{FFCP|EntrezGene=20671|HGNC=|MCL_coexpression_id=435|UniProt=Q61473|association_with_transcript=-100bp_to_ENSMUST00000027035,NM_011441,uc007aez.1,uc007afa.1,uc007afb.1,uc007afc.1_5end|description=CAGE_peak_6_at_Sox17_5end|id=chr1:4486594..4486612,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000474!7.50e-12!9;UBERON:0002048!3.47e-11!14;UBERON:0000117!3.47e-11!14;UBERON:0000171!3.47e-11!14;UBERON:0000170!3.47e-11!14;UBERON:0005597!3.47e-11!14;UBERON:0000118!3.47e-11!14;UBERON:0003134!2.97e-10!8;UBERON:0003100!2.42e-09!11;UBERON:0005153!9.69e-09!17;UBERON:0005178!9.69e-09!17;UBERON:0005181!9.69e-09!17;UBERON:0002224!9.69e-09!17;UBERON:0000915!9.69e-09!17;UBERON:0008947!9.69e-09!17;UBERON:0003258!9.69e-09!17;UBERON:0000464!1.07e-08!57;UBERON:0004175!9.12e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0000993,5.62e-30,1;UBERON:0000474,8.84e-30,9;UBERON:0003100,1.34e-24,11;UBERON:0003134,1.45e-15,8;UBERON:0005156,4.51e-11,26;UBERON:0000990,4.51e-11,26;UBERON:0000992,7.15e-11,3;UBERON:0005795,1.23e-08,4;UBERON:0000995,1.23e-08,4;UBERON:0003975,3.64e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347648640384553,0,0,0,0.203678727700633,0.124406970610093,0.252722758433675,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.350296027101508,0,0.164167464079095,0,0,0,0.268412837520744,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.923765950833023,0,0,0,0.469380496577004,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.655453258862952,0.345369963731791,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70328102249922,0.890328018336276,0.977321756121456,3.62934270539578,0,0,0,0,0.295301892880773,0.307435147943927,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0.337912250981556,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0.563047426353546,5.49454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0.197008964751127,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p6@Sox17}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20671 | |||
|HGNC= | |||
|MCL_coexpression_id=435 | |||
|TSSclassifier=NA | |||
|UniProt=Q61473 | |||
|association_with_transcript=-100bp_to_ENSMUST00000027035,NM_011441,uc007aez.1,uc007afa.1,uc007afb.1,uc007afc.1_5end | |||
|cluster_id=chr1:4486594..4486612,- | |||
|description=CAGE_peak_6_at_Sox17_5end | |||
|id=chr1:4486594..4486612,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000474!7.50e-12!9;UBERON:0002048!3.47e-11!14;UBERON:0000117!3.47e-11!14;UBERON:0000171!3.47e-11!14;UBERON:0000170!3.47e-11!14;UBERON:0005597!3.47e-11!14;UBERON:0000118!3.47e-11!14;UBERON:0003134!2.97e-10!8;UBERON:0003100!2.42e-09!11;UBERON:0005153!9.69e-09!17;UBERON:0005178!9.69e-09!17;UBERON:0005181!9.69e-09!17;UBERON:0002224!9.69e-09!17;UBERON:0000915!9.69e-09!17;UBERON:0008947!9.69e-09!17;UBERON:0003258!9.69e-09!17;UBERON:0000464!1.07e-08!57;UBERON:0004175!9.12e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000993,5.62e-30,1;UBERON:0000474,8.84e-30,9;UBERON:0003100,1.34e-24,11;UBERON:0003134,1.45e-15,8;UBERON:0005156,4.51e-11,26;UBERON:0000990,4.51e-11,26;UBERON:0000992,7.15e-11,3;UBERON:0005795,1.23e-08,4;UBERON:0000995,1.23e-08,4;UBERON:0003975,3.64e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347648640384553,0,0,0,0.203678727700633,0.124406970610093,0.252722758433675,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.350296027101508,0,0.164167464079095,0,0,0,0.268412837520744,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.923765950833023,0,0,0,0.469380496577004,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.655453258862952,0.345369963731791,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70328102249922,0.890328018336276,0.977321756121456,3.62934270539578,0,0,0,0,0.295301892880773,0.307435147943927,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0.337912250981556,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0.563047426353546,5.49454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0.197008964751127,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p6@Sox17 | |||
}} |
Latest revision as of 04:23, 27 September 2015
Short description: | p6@Sox17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Sox17_5end |
Coexpression cluster: | MCL_coexpression_mm9:435 |
Association with transcript: | -100bp_to_ENSMUST00000027035, NM_011441, uc007aez.1, uc007afa.1, uc007afb.1, uc007afc.1_5end |
EntrezGene: | Sox17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oviduct | 5.62e-30 | 1 |
female reproductive system | 8.84e-30 | 9 |
female organism | 1.34e-24 | 11 |
female reproductive organ | 1.45e-15 | 8 |
reproductive structure | 4.51e-11 | 26 |
reproductive system | 4.51e-11 | 26 |
female gonad | 7.15e-11 | 3 |
embryonic uterus | 1.23e-08 | 4 |
uterus | 1.23e-08 | 4 |
internal female genitalia | 3.64e-07 | 5 |