FFCP PHASE1:Hg19::chr6:86204178..86204193,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:86204178..86204193,+ | |||
|coexpression_cluster_id=C1981 | |||
|description=CAGE_peak_at_chr6:86204178..86204193,+ | |||
|id=chr6:86204178..86204193,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.64e-13!180;CL:0000057!2.22e-12!75;CL:0000499!1.62e-11!27;CL:0002620!4.26e-09!23;CL:0000144!5.88e-08!625;CL:0000548!1.38e-07!679;CL:0000004!1.38e-07!679;CL:0000255!1.38e-07!679;CL:0002371!1.58e-07!591;CL:0000222!1.76e-07!119;CL:0000012!2.67e-07!682;CL:0000220!3.40e-07!246;CL:0002321!5.86e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000135;6.13e-14;3!CL:0000388;6.13e-14;3!CL:0000499;9.86e-11;28!CL:0002593;9.97e-10;2!CL:0002595;2.85e-08;5!CL:0000153;1.15e-07;9!CL:0000447;1.15e-07;9!CL:0000134;2.24e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,3.75e-14,3;CL:0000388,3.75e-14,3;CL:0000499,4.65e-11,28;CL:0002593,1.87e-09,2;CL:0002595,5.38e-08,5;CL:0000153,6.27e-08,9;CL:0000447,6.27e-08,9;CL:0000214,9.20e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005795;6.38e-11;10 | |||
|ontology_enrichment_disease=DOID:2394!1.28e-09!14;DOID:120!4.81e-09!27;DOID:193!5.60e-09!29 | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.15e-14;3!DOID:127;1.15e-14;3!DOID:0060072;4.18e-11;4!DOID:2394;3.21e-10;14!DOID:120;1.23e-08;27!DOID:193;5.92e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.14e-14,3;DOID:127,1.14e-14,3;DOID:0060072,4.14e-11,4;DOID:2394,4.46e-10,14;DOID:120,1.30e-08,27;DOID:193,6.20e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0000914!6.37e-11!83;UBERON:0002329!6.37e-11!83;UBERON:0003077!6.37e-11!83;UBERON:0003059!6.37e-11!83;UBERON:0007282!6.37e-11!83;UBERON:0009618!6.37e-11!83;UBERON:0007285!6.37e-11!83;UBERON:0000486!4.59e-10!82;UBERON:0001637!1.90e-08!42;UBERON:0003509!1.90e-08!42;UBERON:0004572!1.90e-08!42;UBERON:0003102!2.46e-08!95;UBERON:0004290!2.85e-08!70;UBERON:0005256!4.71e-08!143;UBERON:0004573!8.55e-08!33;UBERON:0004571!8.55e-08!33;UBERON:0002049!3.27e-07!79;UBERON:0007798!3.27e-07!79;UBERON:0000055!8.84e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;6.13e-14;3!UBERON:0000043;6.13e-14;3!UBERON:0007845;6.13e-14;3!UBERON:0002456;9.97e-10;2!UBERON:0003834;2.85e-08;5!UBERON:0001533;2.85e-08;5!UBERON:0002118;5.48e-08;5!UBERON:0003134;1.99e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,3.75e-14,3;UBERON:0000043,3.75e-14,3;UBERON:0007845,3.75e-14,3;UBERON:0002456,1.87e-09,2;UBERON:0003834,5.38e-08,5;UBERON:0001533,5.38e-08,5;UBERON:0003134,8.91e-08,37;UBERON:0000474,8.91e-08,37;UBERON:0002118,8.95e-08,5;UBERON:0003133,5.33e-07,48;UBERON:0003100,7.23e-07,41;UBERON:0006915,9.20e-07,3;UBERON:0007616,9.20e-07,3;UBERON:0002217,9.20e-07,3;UBERON:0002018,9.20e-07,3 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0.37129905888014,0,0.672325146451775,1.20538905604795,0,0.975865597581014,0.123121058076788,0,0.313454721478088,0,0.410623275218653,0,0,0,0,0,0,0,0,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0.722878304769133,0.50133791063589,1.73815822752988,0,1.94653948121054,0.378139268656271,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0.760272105718513,0.488124115096339,0.367663080345869,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,1.14734648299525,1.41867352879343,0,0,0,0,0.269421344139376,0.326923806226917,0,0,0,0.312160076830321,0,1.64393548606981,0.704606991862589,0.323745888736263,0.280901613404497,0.408308342509787,1.10550885580591,0.309977343527296,0,0.741800787835671,0,0,0.673344455816265,0.625592599359821,0.277064115484183,0,2.14541457059314,0.150238058906597,0,0.538168907066586,0.427114777637135,0.847727604638247,0.900273288253207,0.412210116953756,0.515281080091258,0.558350568994769,0,0.194874010322397,0,0.184099797284599,0.646584227275248,0.710019185033229,0.503760491138201,0.169560592310488,0.57978255948989,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,1.28648187638577,0,0.928735856063958,0.721879481669586,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,1.02940686179115,0,0,0.804231779293047,0.277765335475589,0,0,0,0.115930404975077,0,0.144366447761074,0.462985512576611,1.14152491340759,0,0,0,0,0,0,0.335964256397719,0.992425680696705,0.179117045405697,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0.308482478109971,0.300343057843917,0,0.112131084345361,0.43596006883328,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.868687840005475,1.02738161275192,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0.207970861530807,0.535286966391485,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.868836144680828,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0.511707249066704,0,0,1.3878872442239,0.355123450626254,0.492762936082855,2.07701771673448,0.697262270759755,0,0.601519410909855,0.276242966807689,0.459257792658427,0.910455840033585,0.786746489756545,0,0.462092022626489,0,0,0.527758144464379,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0.656029291399411,0,0.103041011647722,0,0,0,0,1.6068392984416,0.386682873168488,0.154048617114644,0,0,0,0.145016693914229,0.255679882248303,0,0.165284915360978,0,0,0.2023155617111,0.929691098594572,2.20368642781448,0.6970372701606,0,0,0,0.74129687641568,0,0,0,0.190630193923825,0,0,0,0,0.359744915166629,0,0.235624804691373,0,0,0.421258456238981,0,3.1682753652067,1.05650146756755,0.682499557039929,0.282810863907425,1.13008116620243,1.10273068709225,0.66343897524122,0.438450885253763,0,0.655894752046633,0.202910376962704,0.92947049429925,0.281695602532241,0.286822704408103,0,0,0,2.11107635297664,1.64647446479951,0.379473173765715,0,0.192444225451024,0,0,0.0941438007767792,0.43050537267123,0,0,1.83778720165568,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0.933118762985422,0.0898683511473268,0.179021174675609,0,0,0,2.22273980289274,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0.153900517007594,0,0,0,0,0,0.457987967009312,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0.569219092059585,0,0.520679215005393,0,0.0870592065804026,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0,0,0,0,0,0,3.31326035372744,0.248505071130865,0.235694034616795,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0.105600336519406,0,0,0,0,0,5.42999601753713,4.32110745600634,13.3900817644858,0,0,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,1.88212655758537,0,0,0.74627401443437,0,0,1.51522404220071,0.754703705257725,1.77962244319307,0.457680136793847,0.151230923763239,0.310874401165561,1.47855149989634,0.796483835818512,0.449803112163605,0.465788870628778,1.24411862352257,1.59505028734797,2.08698024724694,0.300515217994437,0.380805212168795,1.22061219961398,1.09109195521536,0.322231671127465,0.464033759878494,1.19428766609585,2.40016658797892,0.343395705182793,0,0,0,0,0,0,0,2.44736704506468,0.358177682162975,0.926404341482917,0,0.176689145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| |||
|short_description=p@chr6:86204178..86204193,+ | |||
}} |
Latest revision as of 03:37, 31 July 2015
Short description: | p@chr6:86204178..86204193, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:86204178..86204193, + |
Coexpression cluster: | C1981_leiomyoma_Synoviocyte_Smooth_tenocyte_mesenchymal_Myoblast_meningioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 3.75e-14 | 3 |
tendon cell | 3.75e-14 | 3 |
stromal cell | 4.65e-11 | 28 |
smooth muscle cell of the internal thoracic artery | 1.87e-09 | 2 |
smooth muscle cell of the subclavian artery | 5.38e-08 | 5 |
GAG secreting cell | 6.27e-08 | 9 |
carbohydrate secreting cell | 6.27e-08 | 9 |
synovial cell | 9.20e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 3.75e-14 | 3 |
tendon | 3.75e-14 | 3 |
regular connective tissue | 3.75e-14 | 3 |
internal thoracic artery | 1.87e-09 | 2 |
thoracic segment blood vessel | 5.38e-08 | 5 |
subclavian artery | 5.38e-08 | 5 |
female reproductive organ | 8.91e-08 | 37 |
female reproductive system | 8.91e-08 | 37 |
right ovary | 8.95e-08 | 5 |
reproductive organ | 5.33e-07 | 48 |
female organism | 7.23e-07 | 41 |
stratified squamous epithelium | 9.20e-07 | 3 |
layer of synovial tissue | 9.20e-07 | 3 |
synovial joint | 9.20e-07 | 3 |
synovial membrane of synovial joint | 9.20e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.14e-14 | 3 |
leiomyoma | 1.14e-14 | 3 |
benign neoplasm | 4.14e-11 | 4 |
ovarian cancer | 4.46e-10 | 14 |
female reproductive organ cancer | 1.30e-08 | 27 |
reproductive organ cancer | 6.20e-08 | 29 |