FFCP PHASE1:Mm9::chr2:135485361..135485386,+: Difference between revisions
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{{FFCP|EntrezGene=18798|HGNC=|UniProt=|association_with_transcript=10bp_to_ENSMUST00000146018_5end|description=CAGE_peak_4_at_Plcb4_5end|id=chr2:135485361..135485386,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!9.02e-08!333;UBERON:0004121!9.48e-08!102;UBERON:0000924!9.48e-08!102;UBERON:0006601!9.48e-08!102;UBERON:0004111!4.51e-07!122;UBERON:0002346!7.20e-07!71;UBERON:0003075!7.20e-07!71;UBERON:0007284!7.20e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0004111,9.76e-09,122;UBERON:0010314,3.99e-08,92;UBERON:0000025,8.97e-08,114;UBERON:0001017,6.73e-07,73;UBERON:0000073,7.85e-07,54|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0.387369970324729,0.140788722151667,0,0.171217968225505,0,0,0,0.333109761815663,0.404950534779652,0,0,0.274228867211478,0,1.27564935226605,0,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0.418531630736908,0,0.523523743973798,0,0,0,1.00717454380462,1.31790010585369,0.183546752161682,0,0.218025156380447,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0.336093799142464,0.257259436035947,0.573066879877513,0.515672092277442,0.606949382578793,1.05798195854407,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0.414758449233911,0.135005938331691,0.210324961351382,0.571301968807607,0.220868540951614,0.122490799214954,0.0958454710182364,0,1.10115880999389,2.55374676170375,2.30409799884365,0.131886287730194,0.274462930807229,1.56274011167028,1.11673199600552,0.56276261003168,2.90316670775939,0.883885756421003,1.28134512719193,1.1183966749518,0.151452386666368,0.226714680320357,4.05810284182349,2.58127163094416,0,0,0.649776417447669,0,0.421333260395256,0.340860645156116,0,0,0.563373679106722,1.28326477414318,2.54805239706646,0,0,0.253359865475099,0,0.5709193985953,1.55362730188303,0.742210695324124,0.520455980298408,0.913396434936424,0.230615497256059,1.65794904607885,1.05829836422134,0.251333182659351,0.494389935468748,6.07317299063629,0.884610551949874,0.647067399789637,0.883366073841574,0.484875253135222,0,9.36898550436951,6.49284791121711,0.255457055208591,0,0,0.127070227073065,5.09288173976397,1.37250180845588,0.125654352112864,1.04294592115366,0.255715457330331,2.90903262383384,0.973447578406546,0.916554274652847,1.36847667671102,0.505445516867349,3.99839526184301,0.520481771850815,0,0.360124259610698,0.90422890701429,0.748401490664606,1.5373646434182,0.937017245597288,8.79591460512653,0,0.756424320671277,0.351902248327898,0.657587197282725,0.556094498451196,0.696504333044333,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0.23674473558521,0.983821158737019,1.07986979021165,1.16266972375204,1.3413670069981,2.21854150497622,1.97471819896177,1.97000956894914,4.78305976320549,4.5321996101853,3.29325172936576,7.91817870686193,0.630869845692382,0.205809224758569,0,0.264450566663544,0.853153002140936,0.232236671860439,0.38660238396628,0.403367049246685,0.667134131534611,0.190225626112559,0.474529061544512,0.329397909448022,0.754005626400808,0.596869416123452,0.974820435595601,0.898819408654221,0.432276099749388,0.398282546508734,0,0.456994050438915,1.1270773567308,0.610953983535943,0.581857461502877,0.631222379012867,0.252946148497029,0.442830443938806,0,0.616985819609003,0,0.333690211432188,0.196558995113203,0.449724224769707,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0.936113019343682,0.505157755894224,0,0,2.40179147216586,1.13694847062291,0.488894929326078,0.509235257325564,0.469380496577004,0.335012514883631,1.90434912708811,1.17080188714679,0.472905432318573,1.32878813789265,0.318909537314974,1.63863314715738,0.863424909329478,2.60368305446721,0,0,0,1.65562047782839,1.60550589987792,1.99259867206745,0,4.54447668967871,0.631016438832513,1.56175497718655,2.15423397732799,0.716906393857656,0.445597348164788,0.849229592366497,2.42886421004937,0.584511715822624,3.16230222357219,0.642642632843614,1.56134093729095,0.534196811001766,0.651547837414304,1.81467135269789,0,0,0,0.565815239267694,0,1.22974059177571,0.775284879504663,0,0,0,2.10837217149998,0,2.38307724027652,1.26042765821917,0.388076051348264,0.857348140126369,1.24138163549592,1.07021290561242,1.81003922662333,1.2178597964584,0.469343416127421,1.0591603543191,1.7642271844397,1.31909002353184,1.13025098687134,0.603129249281559,0.238744688006273,0.328281799490123,0.291480836629851,1.48340241608408,0,0.619160603889667,0,0.376736914009382,0.136694227721025,0.457556346413045,0.339956859987711,0.279902904647316,0.138199973804424,0,0.474503990371703,1.42323626988794,1.18805874903981,1.88179466413022,0.87345025498471,0.404593039154462,1.1571483801547,1.30877970992015,0.388844919875379,3.72803587852155,0,0.149516546043979,1.15820943319968,1.75006069509643,0.904118764344118,1.01373675294467,0.938857909166032,0.781226309063701,0.734015410979976,0.241584120826006,1.44015003128933,0.316011120628178,0.202725215290164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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18798 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=10bp_to_ENSMUST00000146018_5end | |||
|cluster_id=chr2:135485361..135485386,+ | |||
|description=CAGE_peak_4_at_Plcb4_5end | |||
|id=chr2:135485361..135485386,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!9.02e-08!333;UBERON:0004121!9.48e-08!102;UBERON:0000924!9.48e-08!102;UBERON:0006601!9.48e-08!102;UBERON:0004111!4.51e-07!122;UBERON:0002346!7.20e-07!71;UBERON:0003075!7.20e-07!71;UBERON:0007284!7.20e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,9.76e-09,122;UBERON:0010314,3.99e-08,92;UBERON:0000025,8.97e-08,114;UBERON:0001017,6.73e-07,73;UBERON:0000073,7.85e-07,54 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0.387369970324729,0.140788722151667,0,0.171217968225505,0,0,0,0.333109761815663,0.404950534779652,0,0,0.274228867211478,0,1.27564935226605,0,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0.418531630736908,0,0.523523743973798,0,0,0,1.00717454380462,1.31790010585369,0.183546752161682,0,0.218025156380447,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0.336093799142464,0.257259436035947,0.573066879877513,0.515672092277442,0.606949382578793,1.05798195854407,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0.414758449233911,0.135005938331691,0.210324961351382,0.571301968807607,0.220868540951614,0.122490799214954,0.0958454710182364,0,1.10115880999389,2.55374676170375,2.30409799884365,0.131886287730194,0.274462930807229,1.56274011167028,1.11673199600552,0.56276261003168,2.90316670775939,0.883885756421003,1.28134512719193,1.1183966749518,0.151452386666368,0.226714680320357,4.05810284182349,2.58127163094416,0,0,0.649776417447669,0,0.421333260395256,0.340860645156116,0,0,0.563373679106722,1.28326477414318,2.54805239706646,0,0,0.253359865475099,0,0.5709193985953,1.55362730188303,0.742210695324124,0.520455980298408,0.913396434936424,0.230615497256059,1.65794904607885,1.05829836422134,0.251333182659351,0.494389935468748,6.07317299063629,0.884610551949874,0.647067399789637,0.883366073841574,0.484875253135222,0,9.36898550436951,6.49284791121711,0.255457055208591,0,0,0.127070227073065,5.09288173976397,1.37250180845588,0.125654352112864,1.04294592115366,0.255715457330331,2.90903262383384,0.973447578406546,0.916554274652847,1.36847667671102,0.505445516867349,3.99839526184301,0.520481771850815,0,0.360124259610698,0.90422890701429,0.748401490664606,1.5373646434182,0.937017245597288,8.79591460512653,0,0.756424320671277,0.351902248327898,0.657587197282725,0.556094498451196,0.696504333044333,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0.23674473558521,0.983821158737019,1.07986979021165,1.16266972375204,1.3413670069981,2.21854150497622,1.97471819896177,1.97000956894914,4.78305976320549,4.5321996101853,3.29325172936576,7.91817870686193,0.630869845692382,0.205809224758569,0,0.264450566663544,0.853153002140936,0.232236671860439,0.38660238396628,0.403367049246685,0.667134131534611,0.190225626112559,0.474529061544512,0.329397909448022,0.754005626400808,0.596869416123452,0.974820435595601,0.898819408654221,0.432276099749388,0.398282546508734,0,0.456994050438915,1.1270773567308,0.610953983535943,0.581857461502877,0.631222379012867,0.252946148497029,0.442830443938806,0,0.616985819609003,0,0.333690211432188,0.196558995113203,0.449724224769707,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0.936113019343682,0.505157755894224,0,0,2.40179147216586,1.13694847062291,0.488894929326078,0.509235257325564,0.469380496577004,0.335012514883631,1.90434912708811,1.17080188714679,0.472905432318573,1.32878813789265,0.318909537314974,1.63863314715738,0.863424909329478,2.60368305446721,0,0,0,1.65562047782839,1.60550589987792,1.99259867206745,0,4.54447668967871,0.631016438832513,1.56175497718655,2.15423397732799,0.716906393857656,0.445597348164788,0.849229592366497,2.42886421004937,0.584511715822624,3.16230222357219,0.642642632843614,1.56134093729095,0.534196811001766,0.651547837414304,1.81467135269789,0,0,0,0.565815239267694,0,1.22974059177571,0.775284879504663,0,0,0,2.10837217149998,0,2.38307724027652,1.26042765821917,0.388076051348264,0.857348140126369,1.24138163549592,1.07021290561242,1.81003922662333,1.2178597964584,0.469343416127421,1.0591603543191,1.7642271844397,1.31909002353184,1.13025098687134,0.603129249281559,0.238744688006273,0.328281799490123,0.291480836629851,1.48340241608408,0,0.619160603889667,0,0.376736914009382,0.136694227721025,0.457556346413045,0.339956859987711,0.279902904647316,0.138199973804424,0,0.474503990371703,1.42323626988794,1.18805874903981,1.88179466413022,0.87345025498471,0.404593039154462,1.1571483801547,1.30877970992015,0.388844919875379,3.72803587852155,0,0.149516546043979,1.15820943319968,1.75006069509643,0.904118764344118,1.01373675294467,0.938857909166032,0.781226309063701,0.734015410979976,0.241584120826006,1.44015003128933,0.316011120628178,0.202725215290164,0.924398614483445,0.51968329191118,0.358053391334963,0.198681354781265,0.240390899039938,0.295379054349154,0.302899349844443,0.533447646584999,0.302478555410522,0.194915761479505,0.0962118416403295,0.116876902181569,0.680191150845634,0,0.0897138566094757,0,11.3981860478992,0.93841237725591,0.183151624267265,0.214368379079066,1.00314420807073,2.82375921308533,2.30162618253588,1.71868654031819,3.09335728218638,0.685082519770642,2.2661816921691,0.675022500231806,1.35096360967266,0.906284817968409,3.10656187051092,0.207574695168353,2.39414924040619,0.341467211508268,0,0.209613162627982,0,1.55572709461131,1.85431551515005,2.56735367673452,1.76888048234658,1.77435509923168,1.32038438970253,0.936415074698824,0.8323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| |||
|short_description=p4@Plcb4 | |||
}} |
Latest revision as of 19:22, 25 September 2015
Short description: | p4@Plcb4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Plcb4_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENSMUST00000146018_5end |
EntrezGene: | Plcb4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 9.76e-09 | 122 |
structure with developmental contribution from neural crest | 3.99e-08 | 92 |
tube | 8.97e-08 | 114 |
central nervous system | 6.73e-07 | 73 |
regional part of nervous system | 7.85e-07 | 54 |