FFCP PHASE1:Mm9::chr2:143836908..143836933,-: Difference between revisions
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{{FFCP|EntrezGene=81910|HGNC=|MCL_coexpression_id=23|UniProt=A2AVJ7,Q99PL5,Q8CAB9|association_with_transcript=65bp_to_ENSMUST00000016072,ENSMUST00000037875,NM_024281,NM_133626,uc008mqj.1,uc008mqk.1,uc008mql.1,uc008mqm.1,uc012cff.1_5end|description=CAGE_peak_2_at_Rrbp1_5end|id=chr2:143836908..143836933,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.90e-15!43;UBERON:0005409!6.49e-14!59;UBERON:0004119!3.62e-13!130;UBERON:0000925!3.62e-13!130;UBERON:0006595!3.62e-13!130;UBERON:0001007!1.99e-12!128;UBERON:0001555!1.99e-12!128;UBERON:0007026!1.99e-12!128;UBERON:0004921!5.42e-12!126;UBERON:0004185!5.42e-12!126;UBERON:0002365!2.86e-11!25;UBERON:0002330!2.86e-11!25;UBERON:0009854!4.03e-10!23;UBERON:0009856!4.03e-10!23;UBERON:0002107!1.41e-09!22;UBERON:0007499!1.41e-09!22;UBERON:0006925!1.41e-09!22;UBERON:0009497!1.41e-09!22;UBERON:0000015!1.41e-09!22;UBERON:0002423!1.41e-09!22;UBERON:0006235!1.41e-09!22;UBERON:0008835!1.41e-09!22;UBERON:0003894!1.41e-09!22;UBERON:0004161!1.41e-09!22;UBERON:0008836!1.41e-09!22;UBERON:0000466!1.64e-09!79;UBERON:0002108!2.66e-09!16;UBERON:0001045!2.24e-08!13;UBERON:0001264!7.89e-08!12;UBERON:0003922!7.89e-08!12;UBERON:0002114!7.89e-08!12;UBERON:0003923!7.89e-08!12;UBERON:0003924!7.89e-08!12;UBERON:0003921!7.89e-08!12;UBERON:0005177!2.14e-07!85;UBERON:0002100!7.40e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.86e-11,25;UBERON:0002330,2.86e-11,25;UBERON:0009854,4.03e-10,23;UBERON:0009856,4.03e-10,23;UBERON:0002107,1.41e-09,22;UBERON:0007499,1.41e-09,22;UBERON:0006925,1.41e-09,22;UBERON:0009497,1.41e-09,22;UBERON:0000015,1.41e-09,22;UBERON:0002423,1.41e-09,22;UBERON:0006235,1.41e-09,22;UBERON:0008835,1.41e-09,22;UBERON:0003894,1.41e-09,22;UBERON:0004161,1.41e-09,22;UBERON:0008836,1.41e-09,22;UBERON:0000160,6.27e-09,31;UBERON:0005177,1.75e-08,79;UBERON:0002100,2.14e-08,90;UBERON:0004119,3.53e-08,118;UBERON:0000925,3.53e-08,118;UBERON:0006595,3.53e-08,118;UBERON:0005409,3.96e-08,47;UBERON:0001264,7.89e-08,12;UBERON:0001007,1.35e-07,116;UBERON:0001555,1.35e-07,116;UBERON:0007026,1.35e-07,116;UBERON:0005256,2.95e-07,45;UBERON:0004921,2.96e-07,114|phase1_expression=34.7522998217403,235.558400156569,216.579637949419,319.402207140013,306.548186727164,114.661542715821,132.925592498854,5.03580961422147,27.3130120974233,27.8536786323172,4.10923123741212,6.22222840163624,3.25281386869291,3.84649770643589,16.9885978525988,9.11138703254217,2.79824751251259,9.62159604342625,12.614527891728,14.429248161133,28.7446320710616,11.0212955832983,8.097193463307,116.314491370807,81.6697040599125,133.221815674685,118.459548943746,127.989912215418,166.840562282696,129.543486696604,133.703497925149,13.3356441426523,12.916360539276,15.8481681015439,20.7973166220918,27.9274204202267,24.5003227514843,13.811543814318,30.4720784364282,13.6116173433188,22.3527965451785,23.9065919735456,17.4783727091215,51.9953858239134,55.554558308294,65.709737273882,39.90195856175,25.0728929837513,34.0513583238431,45.302166484308,50.8150710500066,37.3756667348926,19.2949996966397,18.1340535502836,22.8543783416875,151.783067261209,133.811116451399,100.040385901824,9.3065571995415,11.6378015439847,14.5781222806421,41.3390329124341,67.5864045044466,38.6956878431002,82.0759080930589,56.1279290807419,40.1464148094662,59.553837324841,6.32506635081714,4.72520784160917,9.04397333810943,37.4202789568983,41.5232856989033,4.40966877173835,3.83381884072945,7.35375029288017,33.0347642998166,26.558966321719,25.4986845205364,8.44072241473241,8.05091263701205,7.8137005583514,20.3803589271008,15.757353080887,25.8229038742809,51.5600024578918,48.8334865140923,21.2495368240843,46.1172517399091,44.2849342225763,34.7837386442013,104.971712991729,218.270798120188,270.931002202184,413.257801496718,238.79833082288,103.226648796838,87.7716161276997,53.2561309435881,68.547877455006,19.0138616698519,65.4465034813021,183.459772588785,127.9920065676,45.2466275713438,40.5375784760158,40.9474800461974,109.045605131702,91.4050729274516,53.7360543414666,52.9130246636714,54.4993206178733,61.8049532646237,51.6978657095495,52.2093859682529,34.0556462503421,182.924276123437,95.001777496382,38.9228642857945,140.898926304193,82.5947279041872,113.460809233642,240.445371971378,24.0080253549469,17.5935233723302,239.618717785659,16.8939325553348,25.7958174327165,30.6239247246086,22.3188052713186,14.640019290196,5.15182843662744,13.210648334613,15.8543583544805,21.4021685896347,23.3627418817571,84.5266719957625,89.1997979274367,57.6207889228778,45.2449990155919,32.1397494117878,30.117175680785,43.2149111532838,56.6650115062289,37.352038034079,44.8398020996974,32.2333932485467,41.6512426889815,27.8082710883366,53.1388085271572,80.9375171154165,83.513574054906,105.379907456502,139.649118775389,148.780484622943,56.3266975096336,36.5150857402882,31.65379257511,34.9521104256579,36.4541359662483,49.0159465360491,40.3339017672673,50.189883944064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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=81910 | |||
|HGNC= | |||
|MCL_coexpression_id=23 | |||
|TSSclassifier=NA | |||
|UniProt=A2AVJ7,Q99PL5,Q8CAB9 | |||
|association_with_transcript=65bp_to_ENSMUST00000016072,ENSMUST00000037875,NM_024281,NM_133626,uc008mqj.1,uc008mqk.1,uc008mql.1,uc008mqm.1,uc012cff.1_5end | |||
|cluster_id=chr2:143836908..143836933,- | |||
|description=CAGE_peak_2_at_Rrbp1_5end | |||
|id=chr2:143836908..143836933,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.90e-15!43;UBERON:0005409!6.49e-14!59;UBERON:0004119!3.62e-13!130;UBERON:0000925!3.62e-13!130;UBERON:0006595!3.62e-13!130;UBERON:0001007!1.99e-12!128;UBERON:0001555!1.99e-12!128;UBERON:0007026!1.99e-12!128;UBERON:0004921!5.42e-12!126;UBERON:0004185!5.42e-12!126;UBERON:0002365!2.86e-11!25;UBERON:0002330!2.86e-11!25;UBERON:0009854!4.03e-10!23;UBERON:0009856!4.03e-10!23;UBERON:0002107!1.41e-09!22;UBERON:0007499!1.41e-09!22;UBERON:0006925!1.41e-09!22;UBERON:0009497!1.41e-09!22;UBERON:0000015!1.41e-09!22;UBERON:0002423!1.41e-09!22;UBERON:0006235!1.41e-09!22;UBERON:0008835!1.41e-09!22;UBERON:0003894!1.41e-09!22;UBERON:0004161!1.41e-09!22;UBERON:0008836!1.41e-09!22;UBERON:0000466!1.64e-09!79;UBERON:0002108!2.66e-09!16;UBERON:0001045!2.24e-08!13;UBERON:0001264!7.89e-08!12;UBERON:0003922!7.89e-08!12;UBERON:0002114!7.89e-08!12;UBERON:0003923!7.89e-08!12;UBERON:0003924!7.89e-08!12;UBERON:0003921!7.89e-08!12;UBERON:0005177!2.14e-07!85;UBERON:0002100!7.40e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.86e-11,25;UBERON:0002330,2.86e-11,25;UBERON:0009854,4.03e-10,23;UBERON:0009856,4.03e-10,23;UBERON:0002107,1.41e-09,22;UBERON:0007499,1.41e-09,22;UBERON:0006925,1.41e-09,22;UBERON:0009497,1.41e-09,22;UBERON:0000015,1.41e-09,22;UBERON:0002423,1.41e-09,22;UBERON:0006235,1.41e-09,22;UBERON:0008835,1.41e-09,22;UBERON:0003894,1.41e-09,22;UBERON:0004161,1.41e-09,22;UBERON:0008836,1.41e-09,22;UBERON:0000160,6.27e-09,31;UBERON:0005177,1.75e-08,79;UBERON:0002100,2.14e-08,90;UBERON:0004119,3.53e-08,118;UBERON:0000925,3.53e-08,118;UBERON:0006595,3.53e-08,118;UBERON:0005409,3.96e-08,47;UBERON:0001264,7.89e-08,12;UBERON:0001007,1.35e-07,116;UBERON:0001555,1.35e-07,116;UBERON:0007026,1.35e-07,116;UBERON:0005256,2.95e-07,45;UBERON:0004921,2.96e-07,114 | |||
|phase1_expression=34.7522998217403,235.558400156569,216.579637949419,319.402207140013,306.548186727164,114.661542715821,132.925592498854,5.03580961422147,27.3130120974233,27.8536786323172,4.10923123741212,6.22222840163624,3.25281386869291,3.84649770643589,16.9885978525988,9.11138703254217,2.79824751251259,9.62159604342625,12.614527891728,14.429248161133,28.7446320710616,11.0212955832983,8.097193463307,116.314491370807,81.6697040599125,133.221815674685,118.459548943746,127.989912215418,166.840562282696,129.543486696604,133.703497925149,13.3356441426523,12.916360539276,15.8481681015439,20.7973166220918,27.9274204202267,24.5003227514843,13.811543814318,30.4720784364282,13.6116173433188,22.3527965451785,23.9065919735456,17.4783727091215,51.9953858239134,55.554558308294,65.709737273882,39.90195856175,25.0728929837513,34.0513583238431,45.302166484308,50.8150710500066,37.3756667348926,19.2949996966397,18.1340535502836,22.8543783416875,151.783067261209,133.811116451399,100.040385901824,9.3065571995415,11.6378015439847,14.5781222806421,41.3390329124341,67.5864045044466,38.6956878431002,82.0759080930589,56.1279290807419,40.1464148094662,59.553837324841,6.32506635081714,4.72520784160917,9.04397333810943,37.4202789568983,41.5232856989033,4.40966877173835,3.83381884072945,7.35375029288017,33.0347642998166,26.558966321719,25.4986845205364,8.44072241473241,8.05091263701205,7.8137005583514,20.3803589271008,15.757353080887,25.8229038742809,51.5600024578918,48.8334865140923,21.2495368240843,46.1172517399091,44.2849342225763,34.7837386442013,104.971712991729,218.270798120188,270.931002202184,413.257801496718,238.79833082288,103.226648796838,87.7716161276997,53.2561309435881,68.547877455006,19.0138616698519,65.4465034813021,183.459772588785,127.9920065676,45.2466275713438,40.5375784760158,40.9474800461974,109.045605131702,91.4050729274516,53.7360543414666,52.9130246636714,54.4993206178733,61.8049532646237,51.6978657095495,52.2093859682529,34.0556462503421,182.924276123437,95.001777496382,38.9228642857945,140.898926304193,82.5947279041872,113.460809233642,240.445371971378,24.0080253549469,17.5935233723302,239.618717785659,16.8939325553348,25.7958174327165,30.6239247246086,22.3188052713186,14.640019290196,5.15182843662744,13.210648334613,15.8543583544805,21.4021685896347,23.3627418817571,84.5266719957625,89.1997979274367,57.6207889228778,45.2449990155919,32.1397494117878,30.117175680785,43.2149111532838,56.6650115062289,37.352038034079,44.8398020996974,32.2333932485467,41.6512426889815,27.8082710883366,53.1388085271572,80.9375171154165,83.513574054906,105.379907456502,139.649118775389,148.780484622943,56.3266975096336,36.5150857402882,31.65379257511,34.9521104256579,36.4541359662483,49.0159465360491,40.3339017672673,50.1898839440646,50.3716433273354,49.9825445755106,41.623576110323,46.6795718435337,34.7960720254165,50.5198739234385,64.5178133830844,52.1272445379852,42.690396328197,60.1567315897479,40.1277192093512,12.8276868624118,9.2614151141356,373.703643554676,272.384083663451,41.3779206038354,57.5946946213888,80.5421633263083,107.093951574995,133.204448263077,139.054932688281,206.894670833407,139.994111515409,142.004392972152,115.593710255909,145.638173077983,218.413116302976,210.950736677702,182.015123754492,23.7084876191352,44.5569199177942,54.0997131230786,51.3201346170192,50.2336941764151,42.5724426734234,68.1057504828251,60.0773302276981,73.4754046297634,56.6392982401064,205.145217944307,72.9113111979331,78.0339210599416,97.5901567750265,150.522210070269,177.506389577779,226.362382233682,285.682264488655,128.248964379053,252.596500133035,363.733562514207,223.656709548771,273.345001648355,285.91928983613,348.569174473075,226.266011519419,62.0770718959792,33.9189627069168,58.9933214720134,42.7757616153474,54.213447354644,52.5969648367301,73.0793977520062,61.6622327230644,77.8717611884584,69.9828419290129,91.5270372093976,69.1503188100414,68.5559378007605,50.1932233277845,82.9352061665997,132.712986851765,285.71504262406,207.228496474854,29.7018591477415,32.7020605592247,28.5246804955415,33.5786333181816,17.9839685067266,20.3028147034252,23.0503035574095,33.2166629154047,35.2021905050183,28.8738061404609,25.9078849071932,29.5178416490425,25.2984177885775,25.0630626809009,79.0606274610056,99.5386724499957,79.163062245838,86.6093145605811,1733.65150671991,61.6662815833653,102.185362254086,463.779891119753,656.456107873958,642.539459202808,307.012812283847,404.613040908464,383.234681763575,1138.36440208481,1519.08214956573,1624.38480615894,85.7907806499546,31.5106914554793,32.7277469970369,35.3656107802127,40.4335732704384,53.5106452806212,53.3138826750872,37.1447237919811,130.94681309955,169.041992549329,181.935928395344,111.957765747265,79.9248912144732,94.3897275125639,63.1479699776592,69.2674596924159,182.175522893657,46.3563255026274,37.7624646563254,73.267338126944,52.2248567182587,25.0530047816239,16.266613098802,19.6749228957609,24.1369370591275,21.5525236578433,19.6243962802282,147.019275174327,41.4400151591287,79.7012311137247,69.8794555117054,75.6899631572377,98.2631536857799,133.245974228203,148.032339204077,124.595828384398,135.577262063215,385.851713426981,37.2037339531566,49.7890098326449,43.3501244997596,59.6965148216226,64.3215920919101,76.0302564708502,49.4073974698624,50.3890969346087,33.1355528385246,30.1980151032508,42.3404109199062,20.5407228408316,43.180470856805,39.7491404227881,25.33456048067,25.2427640891149,25.6298947667832,13.8224766947964,17.2796746794255,13.7314371929481,12.34550267811,10.5867494393683,16.3729239642784,10.3908788971556,12.0383209247016,86.1575457737803,27.9702301251322,28.5290064018133,55.0661541674177,68.5823058814276,143.014046293801,123.261043131869,70.0984599588545,225.707446815914,15.8130515932779,15.651058041244,16.0410743763031,12.2015759464018,17.8121455140367,11.3309084608455,11.4753825039407,13.9599572999508,13.5942722695261,12.4262474820437,10.6900968011702,77.4108254398,60.0982292254552,101.13239430041,44.2283773145043,47.7993121970037,95.7883396824962,96.2183717305636,88.573701847341,83.3900798820532,99.8708441567545,98.8402028863039,83.7155076780749,88.2906851663147,85.7511551507306,89.0669202699348,92.5915764299395,81.4076910356835,105.081904704843,109.221598739723,94.6319136583747,91.7549917843775,85.3601560011409,90.4054711453083,97.1208805886212,85.3761393627016,89.4517787347858,102.597187460759,87.7294575444267,109.983885244917,99.4161451880579,80.9706845127132,90.4400605405013,87.5393152700708,104.169569929816,68.1982877770592,96.6137542879537,73.7007715385663,93.5399943816644,92.2072131919575,70.7196898642285 | |||
|short_description=p2@Rrbp1 | |||
}} |
Latest revision as of 20:18, 25 September 2015
Short description: | p2@Rrbp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rrbp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:23 |
Association with transcript: | 65bp_to_ENSMUST00000016072, ENSMUST00000037875, NM_024281, NM_133626, uc008mqj.1, uc008mqk.1, uc008mql.1, uc008mqm.1, uc012cff.1_5end |
EntrezGene: | Rrbp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 2.86e-11 | 25 |
exocrine system | 2.86e-11 | 25 |
digestive tract diverticulum | 4.03e-10 | 23 |
sac | 4.03e-10 | 23 |
liver | 1.41e-09 | 22 |
epithelial sac | 1.41e-09 | 22 |
digestive gland | 1.41e-09 | 22 |
epithelium of foregut-midgut junction | 1.41e-09 | 22 |
anatomical boundary | 1.41e-09 | 22 |
hepatobiliary system | 1.41e-09 | 22 |
foregut-midgut junction | 1.41e-09 | 22 |
hepatic diverticulum | 1.41e-09 | 22 |
liver primordium | 1.41e-09 | 22 |
septum transversum | 1.41e-09 | 22 |
liver bud | 1.41e-09 | 22 |
intestine | 6.27e-09 | 31 |
trunk region element | 1.75e-08 | 79 |
trunk | 2.14e-08 | 90 |
endoderm-derived structure | 3.53e-08 | 118 |
endoderm | 3.53e-08 | 118 |
presumptive endoderm | 3.53e-08 | 118 |
gastrointestinal system | 3.96e-08 | 47 |
pancreas | 7.89e-08 | 12 |
digestive system | 1.35e-07 | 116 |
digestive tract | 1.35e-07 | 116 |
primitive gut | 1.35e-07 | 116 |
trunk mesenchyme | 2.95e-07 | 45 |
subdivision of digestive tract | 2.96e-07 | 114 |