FFCP PHASE1:Mm9::chr2:152365830..152365837,-: Difference between revisions
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{{FFCP|EntrezGene=75400|HGNC=|MCL_coexpression_id=9|UniProt=Q8BGW9|association_with_transcript=0bp_to_ENSMUST00000060598_5end|description=CAGE_peak_4_at_Defb29_5end|id=chr2:152365830..152365837,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!6.21e-30!14;UBERON:0003918!6.21e-30!14;UBERON:0005095!6.21e-30!14;UBERON:0007687!6.21e-30!14;UBERON:0006554!4.60e-26!16;UBERON:0001008!1.81e-24!17;UBERON:0000489!1.32e-19!21;UBERON:0001301!5.76e-17!3;UBERON:0006555!5.76e-17!3;UBERON:0005103!5.76e-17!3;UBERON:0000083!5.76e-17!3;UBERON:0009201!5.76e-17!3;UBERON:0004819!5.76e-17!3;UBERON:0006553!5.76e-17!3;UBERON:0003074!5.76e-17!3;UBERON:0003060!5.76e-17!3;UBERON:0000080!7.23e-13!4;UBERON:0005904!7.23e-13!4;UBERON:0006947!7.23e-13!4;UBERON:0002120!7.23e-13!4;UBERON:0004054!7.23e-13!4;UBERON:0004875!7.23e-13!4;UBERON:0004876!7.23e-13!4;UBERON:0005721!7.23e-13!4;UBERON:0005754!7.23e-13!4;UBERON:0007297!7.23e-13!4;UBERON:0001343!1.16e-11!2;UBERON:0004910!1.16e-11!2;UBERON:0004909!1.16e-11!2;UBERON:0005154!1.16e-11!2;UBERON:0005295!1.16e-11!2;UBERON:0005297!1.16e-11!2;UBERON:0005294!1.16e-11!2;UBERON:0010141!1.16e-11!2;UBERON:0005891!1.16e-11!2;UBERON:0003103!5.50e-09!43;UBERON:0000058!9.55e-09!6;UBERON:0003135!1.22e-08!15;UBERON:0003101!4.33e-08!16;UBERON:0000079!4.33e-08!16;UBERON:0004871!4.62e-08!3;UBERON:0005172!9.72e-08!49;UBERON:0005173!9.72e-08!49;UBERON:0002417!9.72e-08!49;UBERON:0000916!9.72e-08!49|ontology_enrichment_uberon_v019_2=UBERON:0002113,6.28e-15,14;UBERON:0003918,6.28e-15,14;UBERON:0011143,6.28e-15,14;UBERON:0005095,6.28e-15,14;UBERON:0007687,6.28e-15,14;UBERON:0006554,8.03e-12,18;UBERON:0001008,3.01e-11,19;UBERON:0000489,2.91e-10,21;UBERON:0001301,1.13e-08,3;UBERON:0006555,1.13e-08,3;UBERON:0005103,1.13e-08,3;UBERON:0000083,1.13e-08,3;UBERON:0009201,1.13e-08,3;UBERON:0004819,1.13e-08,3;UBERON:0006553,1.13e-08,3;UBERON:0003074,1.13e-08,3;UBERON:0003060,1.13e-08,3;UBERON:0000080,8.08e-07,4;UBERON:0005904,8.08e-07,4;UBERON:0006947,8.08e-07,4;UBERON:0002120,8.08e-07,4;UBERON:0004054,8.08e-07,4;UBERON:0004875,8.08e-07,4;UBERON:0004876,8.08e-07,4;UBERON:0005721,8.08e-07,4;UBERON:0005754,8.08e-07,4;UBERON:0007297,8.08e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.995255764880744,14.9106427475868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.280543279561274,0.69560190836683,0.885660887877613,1.72698600625512,1.97435462274881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p4@Defb29}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75400 | |||
|HGNC= | |||
|MCL_coexpression_id=9 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BGW9 | |||
|association_with_transcript=0bp_to_ENSMUST00000060598_5end | |||
|cluster_id=chr2:152365830..152365837,- | |||
|description=CAGE_peak_4_at_Defb29_5end | |||
|id=chr2:152365830..152365837,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!6.21e-30!14;UBERON:0003918!6.21e-30!14;UBERON:0005095!6.21e-30!14;UBERON:0007687!6.21e-30!14;UBERON:0006554!4.60e-26!16;UBERON:0001008!1.81e-24!17;UBERON:0000489!1.32e-19!21;UBERON:0001301!5.76e-17!3;UBERON:0006555!5.76e-17!3;UBERON:0005103!5.76e-17!3;UBERON:0000083!5.76e-17!3;UBERON:0009201!5.76e-17!3;UBERON:0004819!5.76e-17!3;UBERON:0006553!5.76e-17!3;UBERON:0003074!5.76e-17!3;UBERON:0003060!5.76e-17!3;UBERON:0000080!7.23e-13!4;UBERON:0005904!7.23e-13!4;UBERON:0006947!7.23e-13!4;UBERON:0002120!7.23e-13!4;UBERON:0004054!7.23e-13!4;UBERON:0004875!7.23e-13!4;UBERON:0004876!7.23e-13!4;UBERON:0005721!7.23e-13!4;UBERON:0005754!7.23e-13!4;UBERON:0007297!7.23e-13!4;UBERON:0001343!1.16e-11!2;UBERON:0004910!1.16e-11!2;UBERON:0004909!1.16e-11!2;UBERON:0005154!1.16e-11!2;UBERON:0005295!1.16e-11!2;UBERON:0005297!1.16e-11!2;UBERON:0005294!1.16e-11!2;UBERON:0010141!1.16e-11!2;UBERON:0005891!1.16e-11!2;UBERON:0003103!5.50e-09!43;UBERON:0000058!9.55e-09!6;UBERON:0003135!1.22e-08!15;UBERON:0003101!4.33e-08!16;UBERON:0000079!4.33e-08!16;UBERON:0004871!4.62e-08!3;UBERON:0005172!9.72e-08!49;UBERON:0005173!9.72e-08!49;UBERON:0002417!9.72e-08!49;UBERON:0000916!9.72e-08!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,6.28e-15,14;UBERON:0003918,6.28e-15,14;UBERON:0011143,6.28e-15,14;UBERON:0005095,6.28e-15,14;UBERON:0007687,6.28e-15,14;UBERON:0006554,8.03e-12,18;UBERON:0001008,3.01e-11,19;UBERON:0000489,2.91e-10,21;UBERON:0001301,1.13e-08,3;UBERON:0006555,1.13e-08,3;UBERON:0005103,1.13e-08,3;UBERON:0000083,1.13e-08,3;UBERON:0009201,1.13e-08,3;UBERON:0004819,1.13e-08,3;UBERON:0006553,1.13e-08,3;UBERON:0003074,1.13e-08,3;UBERON:0003060,1.13e-08,3;UBERON:0000080,8.08e-07,4;UBERON:0005904,8.08e-07,4;UBERON:0006947,8.08e-07,4;UBERON:0002120,8.08e-07,4;UBERON:0004054,8.08e-07,4;UBERON:0004875,8.08e-07,4;UBERON:0004876,8.08e-07,4;UBERON:0005721,8.08e-07,4;UBERON:0005754,8.08e-07,4;UBERON:0007297,8.08e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.995255764880744,14.9106427475868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.280543279561274,0.69560190836683,0.885660887877613,1.72698600625512,1.97435462274881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p4@Defb29 | |||
}} |
Latest revision as of 22:09, 25 September 2015
Short description: | p4@Defb29 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Defb29_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | 0bp_to_ENSMUST00000060598_5end |
EntrezGene: | Defb29 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 6.28e-15 | 14 |
kidney mesenchyme | 6.28e-15 | 14 |
upper urinary tract | 6.28e-15 | 14 |
kidney rudiment | 6.28e-15 | 14 |
kidney field | 6.28e-15 | 14 |
urinary system structure | 8.03e-12 | 18 |
renal system | 3.01e-11 | 19 |
cavitated compound organ | 2.91e-10 | 21 |
epididymis | 1.13e-08 | 3 |
excretory tube | 1.13e-08 | 3 |
mesonephric epithelium | 1.13e-08 | 3 |
mesonephric tubule | 1.13e-08 | 3 |
nephric duct | 1.13e-08 | 3 |
kidney epithelium | 1.13e-08 | 3 |
renal duct | 1.13e-08 | 3 |
mesonephric duct | 1.13e-08 | 3 |
pronephric duct | 1.13e-08 | 3 |
mesonephros | 8.08e-07 | 4 |
duct of male reproductive system | 8.08e-07 | 4 |
male genital duct | 8.08e-07 | 4 |
pronephros | 8.08e-07 | 4 |
internal male genitalia | 8.08e-07 | 4 |
nephrogenic cord | 8.08e-07 | 4 |
urogenital ridge | 8.08e-07 | 4 |
pronephric mesoderm | 8.08e-07 | 4 |
rostral part of nephrogenic cord | 8.08e-07 | 4 |
presumptive pronephric mesoderm | 8.08e-07 | 4 |