FFCP PHASE1:Mm9::chr2:155102216..155102230,+: Difference between revisions
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{{FFCP|EntrezGene=66734|HGNC=|MCL_coexpression_id=10|UniProt=Q91VR7|association_with_transcript=36bp_to_NM_025735,uc012cha.1_5end|description=CAGE_peak_2_at_Map1lc3a_5end|id=chr2:155102216..155102230,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.19e-11!102;UBERON:0000924!1.19e-11!102;UBERON:0006601!1.19e-11!102;UBERON:0002346!3.09e-08!71;UBERON:0003075!3.09e-08!71;UBERON:0007284!3.09e-08!71;UBERON:0001017!6.98e-08!73;UBERON:0005743!6.98e-08!73;UBERON:0002021!9.02e-08!10;UBERON:0000411!9.02e-08!10;UBERON:0001950!9.02e-08!10;UBERON:0000073!1.67e-07!75;UBERON:0001016!1.67e-07!75;UBERON:0000033!7.89e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.51e-14,92;UBERON:0004121,3.64e-09,95;UBERON:0000924,3.64e-09,95;UBERON:0006601,3.64e-09,95;UBERON:0001017,6.46e-08,73;UBERON:0002021,8.95e-08,10;UBERON:0000411,8.95e-08,10;UBERON:0001950,8.95e-08,10;UBERON:0001016,1.55e-07,75;UBERON:0010371,1.95e-07,73|phase1_expression=9.92922852049723,9.77131141390211,6.3699893514535,11.7961042409664,12.5223932486587,7.55456723603504,3.73780224952841,6.32704284863724,22.385406822115,32.5349691587571,0.171217968225505,0.0797721589953364,3.93761678841773,6.03200776691082,0.666219523631325,0.202475267389826,0,0.157731082679119,0.548457734422955,0.84877930359606,17.7740476415736,0.198581902401771,0,2.07990149631429,3.89995777814189,9.18771142584032,5.59990595006797,4.74036711908956,4.56056206695297,0.252030129759931,1.55211357458713,3.81018404075779,3.69038872550742,0,2.59966457776147,1.16364251750945,2.6542016314108,15.4856703372656,3.906676722619,5.75876118371178,17.0587131528994,4.78131839470912,7.2826552954673,8.3091899863881,10.644577778049,26.0636388069588,47.7258720052304,9.3750817243592,18.6733255324301,8.36048566019419,9.37909024889929,11.5002051491977,7.71799987865587,18.1340535502836,14.452033363126,0,9.74213695791773,6.70373719960675,4.65327859977075,6.34789175126439,8.87363964908651,10.5041804941431,13.3394219416671,4.94944844504769,7.9109309005358,6.3943210345149,23.3688086204356,29.9690278150813,1.14058573539325,3.10513658162888,4.41682418837902,0,34.2346238475001,3.55223317723367,1.0543001812006,3.67687514644008,57.2602581196821,27.3250903502302,0.153606533256243,5.27545150920775,5.39777097254217,7.29278718779464,0.558365998002762,14.069065250792,27.0452898564954,0.294628585473668,12.2439645487229,8.01517617048792,5.6794644999888,5.51672388779534,19.1310562543107,7.74381489283248,31.2786813505565,3.77792234146472,16.8941868536394,14.3368603871147,32.0213277900394,12.6118438707763,18.4448063268037,22.9670723431721,15.6336195952115,11.5493829672886,5.09610479413291,21.3320010945999,9.30911476348221,7.34743609877786,11.1215377903252,18.1552368753305,1.55362730188303,16.0317510190011,14.9197381018877,32.273340701087,33.2086316048724,33.3097035621296,22.5770317700553,36.3176448942762,4.44950941921873,17.4965221873093,7.96149496754887,10.8383789464764,11.7046004784009,8.727754556434,1.86391761218122,9.07620470735796,16.9651832518899,2.55457055208591,6.11057134980193,6.59893004092748,3.93917703926501,18.2744580073884,20.1300265240196,21.8638572676384,26.2474723490337,25.0601148183724,27.0124457927428,25.3096370385702,6.72139801412087,11.4454412961286,7.32895999457657,10.5220927943237,6.11566081924707,9.42598628177239,4.14142898552303,9.34369870581433,8.16437989815934,7.81493693737584,10.4008914261299,16.039608985819,3.01795190105979,2.45837904218165,3.16712023495108,6.35667624039967,3.33656699070717,9.75106066262066,17.9030458674911,3.58261680273288,4.21327912387941,6.94839349209731,3.12579849335152,7.45652781127807,10.0846205791871,16.7457717158744,10.4167683657493,18.6926020160034,19.591923336697,27.4390054805481,36.2169091889486,40.8678698285093,67.1404187647,102.604665049435,131.736815512016,175.293784922973,174.981441886967,209.22780684742,15.7717461423095,13.2746949969277,0.660837565967596,2.11560453330835,4.47905326123991,3.94802342162745,2.44848176511977,1.81515172161008,3.7804267453628,5.32631753115166,8.0669940462567,5.59976446061637,5.02670417600539,3.38226002469956,5.65395852645448,4.49409704327111,4.32276099749388,4.97853183135918,2.27601481143698,4.22719496655997,1.1270773567308,2.8511185898344,2.90928730751439,3.22624771495465,3.03535378196435,3.39503340353085,5.18095801876537,7.65062416315163,8.89357881261447,0.333690211432188,0.589676985339609,0,0.405720242777006,0.241177159752417,1.01850340712568,0.575392274901621,2.59416362840057,2.19649130550465,7.18841032636773,2.23284568601102,4.36852742360385,4.04126204715379,5.56131981917928,15.9206362049911,9.79191907883005,5.49525094134406,1.95557971730431,3.73439188705414,1.87752198630802,3.51763140627813,4.99891645860629,17.3668946593441,7.25121662888479,7.0868700687608,10.0456504254217,17.533374674584,14.3328534948693,14.6095549167327,6.03165135757089,1.63171705145613,4.42587845717133,3.86311444826625,34.6789274373631,42.782265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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66734 | |||
|HGNC= | |||
|MCL_coexpression_id=10 | |||
|TSSclassifier=NA | |||
|UniProt=Q91VR7 | |||
|association_with_transcript=36bp_to_NM_025735,uc012cha.1_5end | |||
|cluster_id=chr2:155102216..155102230,+ | |||
|description=CAGE_peak_2_at_Map1lc3a_5end | |||
|id=chr2:155102216..155102230,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.19e-11!102;UBERON:0000924!1.19e-11!102;UBERON:0006601!1.19e-11!102;UBERON:0002346!3.09e-08!71;UBERON:0003075!3.09e-08!71;UBERON:0007284!3.09e-08!71;UBERON:0001017!6.98e-08!73;UBERON:0005743!6.98e-08!73;UBERON:0002021!9.02e-08!10;UBERON:0000411!9.02e-08!10;UBERON:0001950!9.02e-08!10;UBERON:0000073!1.67e-07!75;UBERON:0001016!1.67e-07!75;UBERON:0000033!7.89e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.51e-14,92;UBERON:0004121,3.64e-09,95;UBERON:0000924,3.64e-09,95;UBERON:0006601,3.64e-09,95;UBERON:0001017,6.46e-08,73;UBERON:0002021,8.95e-08,10;UBERON:0000411,8.95e-08,10;UBERON:0001950,8.95e-08,10;UBERON:0001016,1.55e-07,75;UBERON:0010371,1.95e-07,73 | |||
|phase1_expression=9.92922852049723,9.77131141390211,6.3699893514535,11.7961042409664,12.5223932486587,7.55456723603504,3.73780224952841,6.32704284863724,22.385406822115,32.5349691587571,0.171217968225505,0.0797721589953364,3.93761678841773,6.03200776691082,0.666219523631325,0.202475267389826,0,0.157731082679119,0.548457734422955,0.84877930359606,17.7740476415736,0.198581902401771,0,2.07990149631429,3.89995777814189,9.18771142584032,5.59990595006797,4.74036711908956,4.56056206695297,0.252030129759931,1.55211357458713,3.81018404075779,3.69038872550742,0,2.59966457776147,1.16364251750945,2.6542016314108,15.4856703372656,3.906676722619,5.75876118371178,17.0587131528994,4.78131839470912,7.2826552954673,8.3091899863881,10.644577778049,26.0636388069588,47.7258720052304,9.3750817243592,18.6733255324301,8.36048566019419,9.37909024889929,11.5002051491977,7.71799987865587,18.1340535502836,14.452033363126,0,9.74213695791773,6.70373719960675,4.65327859977075,6.34789175126439,8.87363964908651,10.5041804941431,13.3394219416671,4.94944844504769,7.9109309005358,6.3943210345149,23.3688086204356,29.9690278150813,1.14058573539325,3.10513658162888,4.41682418837902,0,34.2346238475001,3.55223317723367,1.0543001812006,3.67687514644008,57.2602581196821,27.3250903502302,0.153606533256243,5.27545150920775,5.39777097254217,7.29278718779464,0.558365998002762,14.069065250792,27.0452898564954,0.294628585473668,12.2439645487229,8.01517617048792,5.6794644999888,5.51672388779534,19.1310562543107,7.74381489283248,31.2786813505565,3.77792234146472,16.8941868536394,14.3368603871147,32.0213277900394,12.6118438707763,18.4448063268037,22.9670723431721,15.6336195952115,11.5493829672886,5.09610479413291,21.3320010945999,9.30911476348221,7.34743609877786,11.1215377903252,18.1552368753305,1.55362730188303,16.0317510190011,14.9197381018877,32.273340701087,33.2086316048724,33.3097035621296,22.5770317700553,36.3176448942762,4.44950941921873,17.4965221873093,7.96149496754887,10.8383789464764,11.7046004784009,8.727754556434,1.86391761218122,9.07620470735796,16.9651832518899,2.55457055208591,6.11057134980193,6.59893004092748,3.93917703926501,18.2744580073884,20.1300265240196,21.8638572676384,26.2474723490337,25.0601148183724,27.0124457927428,25.3096370385702,6.72139801412087,11.4454412961286,7.32895999457657,10.5220927943237,6.11566081924707,9.42598628177239,4.14142898552303,9.34369870581433,8.16437989815934,7.81493693737584,10.4008914261299,16.039608985819,3.01795190105979,2.45837904218165,3.16712023495108,6.35667624039967,3.33656699070717,9.75106066262066,17.9030458674911,3.58261680273288,4.21327912387941,6.94839349209731,3.12579849335152,7.45652781127807,10.0846205791871,16.7457717158744,10.4167683657493,18.6926020160034,19.591923336697,27.4390054805481,36.2169091889486,40.8678698285093,67.1404187647,102.604665049435,131.736815512016,175.293784922973,174.981441886967,209.22780684742,15.7717461423095,13.2746949969277,0.660837565967596,2.11560453330835,4.47905326123991,3.94802342162745,2.44848176511977,1.81515172161008,3.7804267453628,5.32631753115166,8.0669940462567,5.59976446061637,5.02670417600539,3.38226002469956,5.65395852645448,4.49409704327111,4.32276099749388,4.97853183135918,2.27601481143698,4.22719496655997,1.1270773567308,2.8511185898344,2.90928730751439,3.22624771495465,3.03535378196435,3.39503340353085,5.18095801876537,7.65062416315163,8.89357881261447,0.333690211432188,0.589676985339609,0,0.405720242777006,0.241177159752417,1.01850340712568,0.575392274901621,2.59416362840057,2.19649130550465,7.18841032636773,2.23284568601102,4.36852742360385,4.04126204715379,5.56131981917928,15.9206362049911,9.79191907883005,5.49525094134406,1.95557971730431,3.73439188705414,1.87752198630802,3.51763140627813,4.99891645860629,17.3668946593441,7.25121662888479,7.0868700687608,10.0456504254217,17.533374674584,14.3328534948693,14.6095549167327,6.03165135757089,1.63171705145613,4.42587845717133,3.86311444826625,34.6789274373631,42.7822656061542,0,58.3207841842102,9.14973836307144,17.1793047490521,16.8030250231583,9.79772071605463,11.1399337041197,14.7199796010193,13.7635638569464,11.6902343164525,15.8115111178609,15.7447445046685,11.639086987078,9.08134578703002,8.79589580509311,7.58862565673663,5.30980553359851,3.8844901784797,3.02323556964751,3.01768127609437,4.13422650033082,3.3817866273832,2.84271122485043,3.63533729477506,6.06045543254026,3.47640433729398,6.32511651449993,7.21948802737308,8.17055053809091,5.221771726908,5.6917820864412,5.35842587578981,5.67488747655275,14.4478742257677,15.1385098953951,29.5331000641161,5.39744928546534,6.56679419677843,9.92377791247329,35.4505443824182,20.6674466170759,18.576380877872,41.6609480570946,42.0200703347357,5.53813589596716,29.6680483216815,0.683483523191411,4.12773735926445,2.03713980106683,0.376736914009382,0.136694227721025,0.228778173206523,7.64902934972349,9.93655311497972,9.39759821870082,7.63736494412091,2.37251995185852,3.86306987541013,4.32021363287205,6.06356058441959,9.38959024108564,8.63131816862852,1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| |||
|short_description=p2@Map1lc3a | |||
}} |
Latest revision as of 23:30, 25 September 2015
Short description: | p2@Map1lc3a |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Map1lc3a_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | 36bp_to_NM_025735, uc012cha.1_5end |
EntrezGene: | Map1lc3a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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structure with developmental contribution from neural crest | 9.51e-14 | 92 |
ectoderm-derived structure | 3.64e-09 | 95 |
ectoderm | 3.64e-09 | 95 |
presumptive ectoderm | 3.64e-09 | 95 |
central nervous system | 6.46e-08 | 73 |
occipital lobe | 8.95e-08 | 10 |
visual cortex | 8.95e-08 | 10 |
neocortex | 8.95e-08 | 10 |
nervous system | 1.55e-07 | 75 |
ecto-epithelium | 1.95e-07 | 73 |