FFCP PHASE1:Hg19::chr7:142334728..142334737,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=2bp_to_AB306258_5end | |||
|cluster_id=chr7:142334728..142334737,+ | |||
|coexpression_cluster_id=C496 | |||
|description=CAGE_peak_1_at_AB306258_5end | |||
|id=chr7:142334728..142334737,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.49e-37!18;CL:0000789!2.49e-37!18;CL:0002420!2.49e-37!18;CL:0002419!2.49e-37!18;CL:0000790!2.49e-37!18;CL:0000084!4.50e-26!25;CL:0000827!4.50e-26!25;CL:0000625!1.03e-23!11;CL:0000624!9.19e-18!6;CL:0000898!8.68e-14!3;CL:0000842!4.25e-13!3;CL:0000838!6.64e-13!52;CL:0000542!1.33e-12!53;CL:0000051!1.33e-12!53;CL:0000224!6.02e-10!4;CL:0000815!6.48e-10!2;CL:0000792!6.48e-10!2;CL:0002677!6.48e-10!2;CL:0002087!2.88e-07!119;CL:0000080!8.93e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000771;8.69e-10;2!CL:0000625;6.54e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,8.69e-10,2;CL:0000625,5.47e-07,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!6.73e-11!4;UBERON:0005058!6.73e-11!4;UBERON:0009113!6.73e-11!4;UBERON:0003295!6.73e-11!4;UBERON:0005562!6.73e-11!4;UBERON:0003351!2.14e-07!6;UBERON:0003408!2.35e-07!10;UBERON:0001042!3.16e-07!10;UBERON:0009145!3.16e-07!10;UBERON:0000178!6.59e-07!15;UBERON:0000179!6.59e-07!15;UBERON:0000463!6.59e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.43e-34;2!UBERON:0005058;1.43e-34;2!UBERON:0009113;1.43e-34;2!UBERON:0004177;1.78e-14;5!UBERON:0005057;1.78e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.04e-18,4;UBERON:0005058,8.04e-18,4;UBERON:0009113,8.04e-18,4;UBERON:0003295,8.04e-18,4;UBERON:0005562,8.04e-18,4;UBERON:0003351,3.26e-12,6;UBERON:0004177,1.33e-10,7;UBERON:0005057,1.33e-10,7;UBERON:0000974,1.09e-07,10;UBERON:0003408,1.09e-07,10;UBERON:0001042,1.09e-07,10;UBERON:0009145,1.09e-07,10;UBERON:0006562,4.57e-07,11;UBERON:0009722,4.57e-07,11;UBERON:0007690,4.57e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0.334372990781356,0.651844533267181,2.36723902867367,0,0.668462741311041,0.589211814949674,1.10766947291811,1.08321545506006,0.512365278902701,0.780356085359269,0.328875809207352,1.10540007114339,0.579606171470105,0.444859689486181,1.07016331235885,0,0.566546713487831,0.383220493601921,1.37450978193052,0.506039384039006,0.637130828648193,0,1.90090408889675,0.150575119077773,0.255973222308837,0,0.236777252044017,1.64225599384209,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.822724546172388,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.90875714753646,2.04846557176331,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p1@AB306258 | |||
}} |
Latest revision as of 06:54, 31 July 2015
Short description: | p1@AB306258 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB306258_5end |
Coexpression cluster: | C496_thymus_CD4_CD8_hairy_vein_chronic_Peripheral |
Association with transcript: | 2bp_to_AB306258_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 8.69e-10 | 2 |
CD8-positive, alpha-beta T cell | 5.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thymus | 8.04e-18 | 4 |
hemolymphoid system gland | 8.04e-18 | 4 |
thymic region | 8.04e-18 | 4 |
pharyngeal gland | 8.04e-18 | 4 |
thymus primordium | 8.04e-18 | 4 |
pharyngeal epithelium | 3.26e-12 | 6 |
hemopoietic organ | 1.33e-10 | 7 |
immune organ | 1.33e-10 | 7 |
neck | 1.09e-07 | 10 |
gland of gut | 1.09e-07 | 10 |
chordate pharynx | 1.09e-07 | 10 |
pharyngeal region of foregut | 1.09e-07 | 10 |
pharynx | 4.57e-07 | 11 |
entire pharyngeal arch endoderm | 4.57e-07 | 11 |
early pharyngeal endoderm | 4.57e-07 | 11 |