FFCP PHASE1:Mm9::chr3:50247500..50247514,-: Difference between revisions
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{{FFCP|EntrezGene=26570|HGNC=|MCL_coexpression_id=6|UniProt=Q9WTR6,Q542C8,Q8BYV9|association_with_transcript=20bp_to_ENSMUST00000029297,ENSMUST00000142932,NM_011990,uc008pdi.1,uc008pdj.1_5end|description=CAGE_peak_1_at_Slc7a11_5end|id=chr3:50247500..50247514,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!2.06e-14!94;UBERON:0007811!6.69e-13!86;UBERON:0000033!3.96e-12!63;UBERON:0002346!3.56e-10!71;UBERON:0003075!3.56e-10!71;UBERON:0007284!3.56e-10!71;UBERON:0001049!6.16e-10!52;UBERON:0005068!6.16e-10!52;UBERON:0006241!6.16e-10!52;UBERON:0007135!6.16e-10!52;UBERON:0000955!7.27e-10!50;UBERON:0006238!7.27e-10!50;UBERON:0002616!2.18e-09!49;UBERON:0003056!2.29e-09!49;UBERON:0004121!7.81e-09!102;UBERON:0000924!7.81e-09!102;UBERON:0006601!7.81e-09!102;UBERON:0002020!1.09e-07!34;UBERON:0000073!7.11e-07!75;UBERON:0001016!7.11e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.26e-10,64;UBERON:0003075,2.26e-10,64;UBERON:0007284,2.26e-10,64;UBERON:0010371,1.35e-09,73;UBERON:0000073,1.66e-09,54;UBERON:0004121,2.13e-09,95;UBERON:0000924,2.13e-09,95;UBERON:0006601,2.13e-09,95;UBERON:0001049,1.08e-08,52;UBERON:0005068,1.08e-08,52;UBERON:0006241,1.08e-08,52;UBERON:0007135,1.08e-08,52;UBERON:0003056,2.33e-08,49;UBERON:0000955,1.88e-07,47;UBERON:0006238,1.88e-07,47;UBERON:0002020,4.36e-07,34;UBERON:0002616,5.36e-07,46;UBERON:0001016,7.88e-07,75|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0.233612640595526,0,1.267098499365,0.70219357896598,3.93801326918661,3.66951931378547,0,0,2.33176833270964,3.03712901084739,0.699561878128147,1.10411757875383,0.548457734422955,0.42438965179803,4.67738095830884,0.893618560807968,0.261199789138935,1.75991665072747,2.2940928106717,0,0,0.215471232685889,0.190023419456374,0.756090389279792,0.886922042621219,2.54012269383853,1.23012957516914,0,0,0,0,87.4731108240137,75.0081930742848,17.7998072951091,821.171157291296,215.842373246869,113.60942260929,1.1330713617802,0.912392380975631,0.917733760808408,31.2956537739216,0.872100625521786,0.659058548203415,1.1665793944457,7.27929392451885,0,0,0,0,1.80081605225163,0.85960031981627,0.515672092277442,0,0.528990979272033,2.53532561402472,43.0332555727798,52.4683929705572,4.49949858640699,1.97773272513395,3.5524005747305,23.0692085099172,13.4476406862544,1.34796496001021,1.4850653216486,1.26194976810829,4.57041575046086,8.61387309711293,0.734944795289724,0.766763768145891,1.83843757322004,16.5173821499083,15.3224805702225,13.5173749265494,0.659431438650969,0.731901148819277,3.12548022334056,11.1673199600552,30.9519435517424,41.2555268997387,11.1958862479994,6.83384067835694,5.21918448310842,10.3744884866462,9.14415877292105,0,0,5.439770669662,0,0,0,2.94933282276679,0.170430322578058,0,0,0,0,0,0,34.8550576028055,32.9367825117628,37.9143333761088,2.16949371466214,17.3488382043605,1.48442139064825,2.94925055502431,1.82679286987285,1.15307748628029,0.753613202763113,0.705532242814229,0.125666591329675,0.247194967734374,0.144599356919912,0.884610551949874,0.323533699894818,0.662524555381181,0.969750506270444,1.86391761218122,11.1256702864388,15.4990563041957,1.02182822083437,4.79260498023681,5.39912457894067,5.46401976414178,31.1564529962031,18.7575247155637,3.01570445070875,32.3313235557634,26.8501230196847,23.4800490352303,21.2536054618763,0.203678727700633,5.47390670684409,14.6579199891531,200.130204948037,5.46505860443356,8.73627996847197,8.82304436046211,4.52114453507145,5.51095643125756,9.99287018221828,7.30873451565885,41.3925393182425,1.5089759505299,1.70195472151037,2.46331573829528,2.84954452155847,6.95118123063995,6.96504333044333,4.11564272815887,0.398068533636986,2.80885274925294,2.83082697826187,8.52490498186778,0,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0,0,0,0.350296027101508,0,0,0.0810688095458557,0.292399974850665,0,0.134206418760372,37.6419007929788,7.82075054082562,0.991256348951394,0.528901133327089,0,0,0.644337306610467,0.605050573870028,0.22237804384487,0.190225626112559,0.474529061544512,0,0.502670417600539,0.198956472041151,0.779856348476481,0.898819408654221,0.864552199498777,0.597423819763102,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0,0.287696137450811,0.324270453550071,0.274561413188081,1.43768206527355,0,0,0,0,0,1.66277871149944,0.189491411770485,0,0,0,1.50755631697634,0.476087281772027,0.390267295715598,1.41871629695572,0.221464689648775,0.797273843287435,1.47476983244164,0.863424909329478,1.15719246865209,0,1.63171705145613,0.491764273019036,0.551873492609465,30.6651626876683,17.6989646754227,1.47541450839008,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0,0,0,0,0,29.5615611108062,3.40656204499845,0,0.651547837414304,14.6823409445557,10.619611067197,0,0,0.377210159511796,2.36241514304618,0.922305443831782,2.32585463851399,1.45413491791002,1.78248689192361,6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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=26570 | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WTR6,Q542C8,Q8BYV9 | |||
|association_with_transcript=20bp_to_ENSMUST00000029297,ENSMUST00000142932,NM_011990,uc008pdi.1,uc008pdj.1_5end | |||
|cluster_id=chr3:50247500..50247514,- | |||
|description=CAGE_peak_1_at_Slc7a11_5end | |||
|id=chr3:50247500..50247514,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.06e-14!94;UBERON:0007811!6.69e-13!86;UBERON:0000033!3.96e-12!63;UBERON:0002346!3.56e-10!71;UBERON:0003075!3.56e-10!71;UBERON:0007284!3.56e-10!71;UBERON:0001049!6.16e-10!52;UBERON:0005068!6.16e-10!52;UBERON:0006241!6.16e-10!52;UBERON:0007135!6.16e-10!52;UBERON:0000955!7.27e-10!50;UBERON:0006238!7.27e-10!50;UBERON:0002616!2.18e-09!49;UBERON:0003056!2.29e-09!49;UBERON:0004121!7.81e-09!102;UBERON:0000924!7.81e-09!102;UBERON:0006601!7.81e-09!102;UBERON:0002020!1.09e-07!34;UBERON:0000073!7.11e-07!75;UBERON:0001016!7.11e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.26e-10,64;UBERON:0003075,2.26e-10,64;UBERON:0007284,2.26e-10,64;UBERON:0010371,1.35e-09,73;UBERON:0000073,1.66e-09,54;UBERON:0004121,2.13e-09,95;UBERON:0000924,2.13e-09,95;UBERON:0006601,2.13e-09,95;UBERON:0001049,1.08e-08,52;UBERON:0005068,1.08e-08,52;UBERON:0006241,1.08e-08,52;UBERON:0007135,1.08e-08,52;UBERON:0003056,2.33e-08,49;UBERON:0000955,1.88e-07,47;UBERON:0006238,1.88e-07,47;UBERON:0002020,4.36e-07,34;UBERON:0002616,5.36e-07,46;UBERON:0001016,7.88e-07,75 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0.233612640595526,0,1.267098499365,0.70219357896598,3.93801326918661,3.66951931378547,0,0,2.33176833270964,3.03712901084739,0.699561878128147,1.10411757875383,0.548457734422955,0.42438965179803,4.67738095830884,0.893618560807968,0.261199789138935,1.75991665072747,2.2940928106717,0,0,0.215471232685889,0.190023419456374,0.756090389279792,0.886922042621219,2.54012269383853,1.23012957516914,0,0,0,0,87.4731108240137,75.0081930742848,17.7998072951091,821.171157291296,215.842373246869,113.60942260929,1.1330713617802,0.912392380975631,0.917733760808408,31.2956537739216,0.872100625521786,0.659058548203415,1.1665793944457,7.27929392451885,0,0,0,0,1.80081605225163,0.85960031981627,0.515672092277442,0,0.528990979272033,2.53532561402472,43.0332555727798,52.4683929705572,4.49949858640699,1.97773272513395,3.5524005747305,23.0692085099172,13.4476406862544,1.34796496001021,1.4850653216486,1.26194976810829,4.57041575046086,8.61387309711293,0.734944795289724,0.766763768145891,1.83843757322004,16.5173821499083,15.3224805702225,13.5173749265494,0.659431438650969,0.731901148819277,3.12548022334056,11.1673199600552,30.9519435517424,41.2555268997387,11.1958862479994,6.83384067835694,5.21918448310842,10.3744884866462,9.14415877292105,0,0,5.439770669662,0,0,0,2.94933282276679,0.170430322578058,0,0,0,0,0,0,34.8550576028055,32.9367825117628,37.9143333761088,2.16949371466214,17.3488382043605,1.48442139064825,2.94925055502431,1.82679286987285,1.15307748628029,0.753613202763113,0.705532242814229,0.125666591329675,0.247194967734374,0.144599356919912,0.884610551949874,0.323533699894818,0.662524555381181,0.969750506270444,1.86391761218122,11.1256702864388,15.4990563041957,1.02182822083437,4.79260498023681,5.39912457894067,5.46401976414178,31.1564529962031,18.7575247155637,3.01570445070875,32.3313235557634,26.8501230196847,23.4800490352303,21.2536054618763,0.203678727700633,5.47390670684409,14.6579199891531,200.130204948037,5.46505860443356,8.73627996847197,8.82304436046211,4.52114453507145,5.51095643125756,9.99287018221828,7.30873451565885,41.3925393182425,1.5089759505299,1.70195472151037,2.46331573829528,2.84954452155847,6.95118123063995,6.96504333044333,4.11564272815887,0.398068533636986,2.80885274925294,2.83082697826187,8.52490498186778,0,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0,0,0,0.350296027101508,0,0,0.0810688095458557,0.292399974850665,0,0.134206418760372,37.6419007929788,7.82075054082562,0.991256348951394,0.528901133327089,0,0,0.644337306610467,0.605050573870028,0.22237804384487,0.190225626112559,0.474529061544512,0,0.502670417600539,0.198956472041151,0.779856348476481,0.898819408654221,0.864552199498777,0.597423819763102,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0,0.287696137450811,0.324270453550071,0.274561413188081,1.43768206527355,0,0,0,0,0,1.66277871149944,0.189491411770485,0,0,0,1.50755631697634,0.476087281772027,0.390267295715598,1.41871629695572,0.221464689648775,0.797273843287435,1.47476983244164,0.863424909329478,1.15719246865209,0,1.63171705145613,0.491764273019036,0.551873492609465,30.6651626876683,17.6989646754227,1.47541450839008,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0,0,0,0,0,29.5615611108062,3.40656204499845,0,0.651547837414304,14.6823409445557,10.619611067197,0,0,0.377210159511796,2.36241514304618,0.922305443831782,2.32585463851399,1.45413491791002,1.78248689192361,6.32073515871632,8.4334886859999,8.25084345985495,0.340439605753788,0.900305470156551,0.517434735131018,1.28602221018955,2.48276327099183,2.14042581122485,3.9491764944509,0.304464949114599,0,0.42366414172764,1.32317038832977,3.62749756471256,2.42196640043858,2.35220407219808,5.37175548014114,13.1312719796049,1.45740418314925,12.6089205367147,8.03093139749908,0.412773735926445,2.40752885580625,0.565105371014073,5.60446333656203,7.54967971581525,17.3377998593732,11.1961161858926,10.3649980353318,6.68269432610579,0.158167996790568,0,0.108005340821801,0.627264888043406,2.18362563746178,4.18079473792944,1.81837602595739,6.54389854960074,0.388844919875379,1.24267862617385,2.81846469342095,0.598066184175915,0.496375471371293,3.88902376688095,3.48731523389874,1.68956125490778,0,0.13020438484395,0,2.41584120826006,1.72818003754719,46.137623611714,0.202725215290164,0.308132871494482,0.909445760844565,7.51912121803422,18.4773659946576,16.3465811347158,17.4273642066001,27.1599750360517,33.1499608949249,31.9619006883784,30.7966903137618,25.4961380346873,71.9961717438465,11.789979947991,0,0.0897138566094757,0.167884616364078,0.965947970160952,1.50145980360946,20.3298302936664,4.50173596066038,0.501572104035363,19.2015626489803,22.5559365888517,13.7494923225455,23.7157391634289,23.9778881919725,25.6833925112498,22.2757425076496,19.8141329418657,14.5005570874945,19.1571315348173,1.03787347584177,0.798049746802062,1.53660245178721,5.10524105843418,2.09613162627982,1.654591576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| |||
|short_description=p1@Slc7a11 | |||
}} |
Latest revision as of 13:39, 25 September 2015
Short description: | p1@Slc7a11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc7a11_5end |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | 20bp_to_ENSMUST00000029297, ENSMUST00000142932, NM_011990, uc008pdi.1, uc008pdj.1_5end |
EntrezGene: | Slc7a11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.26e-10 | 64 |
neural plate | 2.26e-10 | 64 |
presumptive neural plate | 2.26e-10 | 64 |
ecto-epithelium | 1.35e-09 | 73 |
regional part of nervous system | 1.66e-09 | 54 |
ectoderm-derived structure | 2.13e-09 | 95 |
ectoderm | 2.13e-09 | 95 |
presumptive ectoderm | 2.13e-09 | 95 |
neural tube | 1.08e-08 | 52 |
neural rod | 1.08e-08 | 52 |
future spinal cord | 1.08e-08 | 52 |
neural keel | 1.08e-08 | 52 |
pre-chordal neural plate | 2.33e-08 | 49 |
brain | 1.88e-07 | 47 |
future brain | 1.88e-07 | 47 |
gray matter | 4.36e-07 | 34 |
regional part of brain | 5.36e-07 | 46 |
nervous system | 7.88e-07 | 75 |