FFCP PHASE1:Mm9::chr3:82351958..82351976,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=18167|HGNC=|MCL_coexpression_id=223|UniProt=Q3SWR9,Q8BWV1|association_with_transcript=30bp_to_NM_001205099,NM_008731,uc008ppa.1_5end|description=CAGE_peak_1_at_Npy2r_5end|id=chr3:82351958..82351976,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,1.05e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.78e-09!71;UBERON:0003075!3.78e-09!71;UBERON:0007284!3.78e-09!71;UBERON:0001017!2.26e-07!73;UBERON:0005743!2.26e-07!73;UBERON:0005157!3.69e-07!27;UBERON:0004121!5.90e-07!102;UBERON:0000924!5.90e-07!102;UBERON:0006601!5.90e-07!102;UBERON:0000073!7.04e-07!75;UBERON:0001016!7.04e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.98e-11,39;UBERON:0001890,1.98e-11,39;UBERON:0006240,1.98e-11,39;UBERON:0000073,2.13e-11,54;UBERON:0003080,4.14e-11,40;UBERON:0002020,1.18e-10,34;UBERON:0003528,4.17e-10,29;UBERON:0002791,4.17e-10,29;UBERON:0001893,4.17e-10,29;UBERON:0001049,5.70e-10,52;UBERON:0005068,5.70e-10,52;UBERON:0006241,5.70e-10,52;UBERON:0007135,5.70e-10,52;UBERON:0002616,1.79e-09,46;UBERON:0001017,1.85e-09,73;UBERON:0000955,3.06e-09,47;UBERON:0006238,3.06e-09,47;UBERON:0001016,3.74e-09,75;UBERON:0003056,8.34e-09,49;UBERON:0010314,1.53e-08,92;UBERON:0002346,8.58e-08,64;UBERON:0003075,8.58e-08,64;UBERON:0007284,8.58e-08,64;UBERON:0002038,1.05e-07,3;UBERON:0009663,1.05e-07,3;UBERON:0009661,1.05e-07,3;UBERON:0000125,1.05e-07,3;UBERON:0002308,1.05e-07,3;UBERON:0002369,5.34e-07,7;UBERON:0006858,5.34e-07,7;UBERON:0004121,8.42e-07,95;UBERON:0000924,8.42e-07,95;UBERON:0006601,8.42e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,1.14260393761521,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,1.0214987046815,0.921639199537461,0,0.182975287204819,0,0,2.25105044012672,2.44477196442896,0.294628585473668,0.284743361598206,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,4.45326417194474,0.173485326766136,0.608930956624282,0,1.50722640552623,0.470354828542819,1.63366568728578,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0.599162557619291,2.28750301409313,0.502617408451458,3.12883776346098,2.30143911597297,1.87009240103604,2.27137768294861,0.101839363850316,0.124406970610093,0,0,0,0,0,0.753524089178575,0.204109497453984,0.2562274405697,0,0,0,0,0.175951124163949,0.43839146485515,0.556094498451196,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0,0,15.3511662451813,1.44066457330998,0,0,0,0,0.257734922644187,0.201683524623343,0.667134131534611,0,0,0.494096864172033,0.251335208800269,0,0.38992817423824,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.670025029767263,2.61848004974615,0.195133647857799,0.630540576424764,0.8858587585951,0.159454768657487,0.163863314715738,0.345369963731791,0,0,0,0,0,0.963303539926752,0.468846746368813,0,0,0.631016438832513,0.390438744296638,0.430846795465598,0.477937595905104,0.222798674082394,0.849229592366497,0,1.16902343164525,0,0.642642632843614,0,0.35613120733451,0.325773918707152,0.164970122972535,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0.354680467284547,0,0,0.304464949114599,0,0,0.441056796109924,0,0,0,0,0,0,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0.330916980914195,0.194451188344048,0.774958940866387,0.675824501963113,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428736758158132,0,0.564751842617067,0,0,1.03111909406213,0,0,0,1.35096360967266,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.192075457214608,0.229741875822453,0.476293691283074,0.115884325944855,0.192909220463705,0,0.147198920134397,0.685738504770831,0.177475806159338,0.238436189947321,0,0,0.0846146078916765,0.365855945745545,0,0.407412341537585,0,0,0.29551344712669,0,0,0.578719832943424,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0|short_description=p1@Npy2r}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18167 | |||
|HGNC= | |||
|MCL_coexpression_id=223 | |||
|TSSclassifier=NA | |||
|UniProt=Q3SWR9,Q8BWV1 | |||
|association_with_transcript=30bp_to_NM_001205099,NM_008731,uc008ppa.1_5end | |||
|cluster_id=chr3:82351958..82351976,- | |||
|description=CAGE_peak_1_at_Npy2r_5end | |||
|id=chr3:82351958..82351976,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.05e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.78e-09!71;UBERON:0003075!3.78e-09!71;UBERON:0007284!3.78e-09!71;UBERON:0001017!2.26e-07!73;UBERON:0005743!2.26e-07!73;UBERON:0005157!3.69e-07!27;UBERON:0004121!5.90e-07!102;UBERON:0000924!5.90e-07!102;UBERON:0006601!5.90e-07!102;UBERON:0000073!7.04e-07!75;UBERON:0001016!7.04e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.98e-11,39;UBERON:0001890,1.98e-11,39;UBERON:0006240,1.98e-11,39;UBERON:0000073,2.13e-11,54;UBERON:0003080,4.14e-11,40;UBERON:0002020,1.18e-10,34;UBERON:0003528,4.17e-10,29;UBERON:0002791,4.17e-10,29;UBERON:0001893,4.17e-10,29;UBERON:0001049,5.70e-10,52;UBERON:0005068,5.70e-10,52;UBERON:0006241,5.70e-10,52;UBERON:0007135,5.70e-10,52;UBERON:0002616,1.79e-09,46;UBERON:0001017,1.85e-09,73;UBERON:0000955,3.06e-09,47;UBERON:0006238,3.06e-09,47;UBERON:0001016,3.74e-09,75;UBERON:0003056,8.34e-09,49;UBERON:0010314,1.53e-08,92;UBERON:0002346,8.58e-08,64;UBERON:0003075,8.58e-08,64;UBERON:0007284,8.58e-08,64;UBERON:0002038,1.05e-07,3;UBERON:0009663,1.05e-07,3;UBERON:0009661,1.05e-07,3;UBERON:0000125,1.05e-07,3;UBERON:0002308,1.05e-07,3;UBERON:0002369,5.34e-07,7;UBERON:0006858,5.34e-07,7;UBERON:0004121,8.42e-07,95;UBERON:0000924,8.42e-07,95;UBERON:0006601,8.42e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,1.14260393761521,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,1.0214987046815,0.921639199537461,0,0.182975287204819,0,0,2.25105044012672,2.44477196442896,0.294628585473668,0.284743361598206,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,4.45326417194474,0.173485326766136,0.608930956624282,0,1.50722640552623,0.470354828542819,1.63366568728578,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0.599162557619291,2.28750301409313,0.502617408451458,3.12883776346098,2.30143911597297,1.87009240103604,2.27137768294861,0.101839363850316,0.124406970610093,0,0,0,0,0,0.753524089178575,0.204109497453984,0.2562274405697,0,0,0,0,0.175951124163949,0.43839146485515,0.556094498451196,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0,0,15.3511662451813,1.44066457330998,0,0,0,0,0.257734922644187,0.201683524623343,0.667134131534611,0,0,0.494096864172033,0.251335208800269,0,0.38992817423824,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.670025029767263,2.61848004974615,0.195133647857799,0.630540576424764,0.8858587585951,0.159454768657487,0.163863314715738,0.345369963731791,0,0,0,0,0,0.963303539926752,0.468846746368813,0,0,0.631016438832513,0.390438744296638,0.430846795465598,0.477937595905104,0.222798674082394,0.849229592366497,0,1.16902343164525,0,0.642642632843614,0,0.35613120733451,0.325773918707152,0.164970122972535,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0.354680467284547,0,0,0.304464949114599,0,0,0.441056796109924,0,0,0,0,0,0,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0.330916980914195,0.194451188344048,0.774958940866387,0.675824501963113,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428736758158132,0,0.564751842617067,0,0,1.03111909406213,0,0,0,1.35096360967266,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.192075457214608,0.229741875822453,0.476293691283074,0.115884325944855,0.192909220463705,0,0.147198920134397,0.685738504770831,0.177475806159338,0.238436189947321,0,0,0.0846146078916765,0.365855945745545,0,0.407412341537585,0,0,0.29551344712669,0,0,0.578719832943424,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p1@Npy2r | |||
}} |
Latest revision as of 17:54, 25 September 2015
Short description: | p1@Npy2r |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Npy2r_5end |
Coexpression cluster: | MCL_coexpression_mm9:223 |
Association with transcript: | 30bp_to_NM_001205099, NM_008731, uc008ppa.1_5end |
EntrezGene: | Npy2r |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.05e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 1.98e-11 | 39 |
forebrain | 1.98e-11 | 39 |
future forebrain | 1.98e-11 | 39 |
regional part of nervous system | 2.13e-11 | 54 |
anterior neural tube | 4.14e-11 | 40 |
gray matter | 1.18e-10 | 34 |
brain grey matter | 4.17e-10 | 29 |
regional part of telencephalon | 4.17e-10 | 29 |
telencephalon | 4.17e-10 | 29 |
neural tube | 5.70e-10 | 52 |
neural rod | 5.70e-10 | 52 |
future spinal cord | 5.70e-10 | 52 |
neural keel | 5.70e-10 | 52 |
regional part of brain | 1.79e-09 | 46 |
central nervous system | 1.85e-09 | 73 |
brain | 3.06e-09 | 47 |
future brain | 3.06e-09 | 47 |
nervous system | 3.74e-09 | 75 |
pre-chordal neural plate | 8.34e-09 | 49 |
structure with developmental contribution from neural crest | 1.53e-08 | 92 |
neurectoderm | 8.58e-08 | 64 |
neural plate | 8.58e-08 | 64 |
presumptive neural plate | 8.58e-08 | 64 |
substantia nigra | 1.05e-07 | 3 |
telencephalic nucleus | 1.05e-07 | 3 |
midbrain nucleus | 1.05e-07 | 3 |
neural nucleus | 1.05e-07 | 3 |
nucleus of brain | 1.05e-07 | 3 |
adrenal gland | 5.34e-07 | 7 |
adrenal/interrenal gland | 5.34e-07 | 7 |
ectoderm-derived structure | 8.42e-07 | 95 |
ectoderm | 8.42e-07 | 95 |
presumptive ectoderm | 8.42e-07 | 95 |