FFCP PHASE1:Hg19::chr8:143867946..143867962,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8581 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13348 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-1bp_to_ENST00000518434_5end | |||
|cluster_id=chr8:143867946..143867962,- | |||
|coexpression_cluster_id=C3869 | |||
|description=CAGE_peak_1_at_LY6D_5end | |||
|id=chr8:143867946..143867962,- | |||
|ontology_enrichment_celltype=CL:0002076!4.14e-16!43;CL:0000223!5.01e-14!59;CL:0000066!1.25e-13!254;CL:0002368!1.27e-12!13;CL:0002251!2.87e-09!21;CL:0002202!6.55e-09!9;CL:0002632!6.55e-09!9;CL:0002159!1.42e-08!13;CL:0000622!6.99e-07!5;CL:0000244!9.99e-07!4;CL:0000731!9.99e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.69e-16;13!CL:0002076;4.48e-16;42!CL:0002251;2.80e-12;20!CL:0002202;9.79e-11;9!CL:0002632;9.79e-11;9!CL:0002159;2.90e-10;14!CL:0000622;6.74e-10;5!CL:0000244;1.04e-09;4!CL:0000731;1.04e-09;4!CL:0000154;3.56e-08;6!CL:0002621;2.14e-07;3!CL:0002328;2.81e-07;3!CL:0000307;8.85e-07;3!CL:0002623;9.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.07e-21,42;CL:0002368,1.70e-16,13;CL:0000223,6.31e-15,58;CL:0002251,2.68e-12,20;CL:0000066,7.72e-11,253;CL:0002202,9.64e-11,9;CL:0002632,9.64e-11,9;CL:0002159,2.69e-10,14;CL:0000622,5.94e-10,5;CL:0000244,1.04e-09,4;CL:0000731,1.04e-09,4;CL:0000154,3.21e-08,6;CL:0002621,2.16e-07,3;CL:0002328,2.84e-07,3;CL:0000068,8.59e-07,3;CL:0000069,8.59e-07,3;CL:0000307,8.59e-07,3;CL:0000377,8.59e-07,3;CL:0002623,8.77e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.33e-08;58!CL:0000377;8.85e-07;3 | |||
|ontology_enrichment_disease=DOID:305!1.90e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.17e-17!169;UBERON:0000925!1.17e-17!169;UBERON:0006595!1.17e-17!169;UBERON:0001004!1.26e-14!72;UBERON:0001007!2.15e-13!155;UBERON:0001555!2.15e-13!155;UBERON:0007026!2.15e-13!155;UBERON:0000166!6.03e-11!21;UBERON:0000161!9.19e-11!35;UBERON:0004921!8.18e-10!129;UBERON:0004185!8.18e-10!129;UBERON:0000077!1.77e-09!130;UBERON:0000065!4.48e-09!53;UBERON:0001041!5.44e-09!98;UBERON:0000165!2.66e-08!28;UBERON:0000930!2.66e-08!28;UBERON:0007196!3.34e-08!14;UBERON:0001558!3.34e-08!14;UBERON:0000365!1.15e-07!5;UBERON:0001044!1.44e-07!6;UBERON:0003293!1.44e-07!6;UBERON:0003294!1.44e-07!6;UBERON:0010047!1.44e-07!6;UBERON:0000167!1.44e-07!6;UBERON:0003408!3.30e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.66e-11;5!UBERON:0000165;3.74e-11;28!UBERON:0000486;1.14e-10;12!UBERON:0000161;1.35e-10;19!UBERON:0000166;1.35e-10;19!UBERON:0007196;6.44e-10;15!UBERON:0001558;6.44e-10;15!UBERON:0005910;3.30e-09;6!UBERON:0001041;2.61e-08;14!UBERON:0001044;4.38e-08;6!UBERON:0003293;4.38e-08;6!UBERON:0003294;4.38e-08;6!UBERON:0010047;4.38e-08;6!UBERON:0003408;4.38e-08;6!UBERON:0000167;4.38e-08;6!UBERON:0001949;2.14e-07;3!UBERON:0003126;2.26e-07;7!UBERON:0001005;2.26e-07;7!UBERON:0004815;2.81e-07;3!UBERON:0002031;2.81e-07;3!UBERON:0005178;6.67e-07;34!UBERON:0002224;6.67e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,3.07e-16,74;UBERON:0004119,5.86e-16,160;UBERON:0000925,5.86e-16,160;UBERON:0006595,5.86e-16,160;UBERON:0000161,1.84e-13,36;UBERON:0000166,5.16e-13,22;UBERON:0000365,3.52e-11,5;UBERON:0000165,1.15e-10,29;UBERON:0000930,1.15e-10,29;UBERON:0001007,1.79e-10,145;UBERON:0001555,1.79e-10,145;UBERON:0007026,1.79e-10,145;UBERON:0003102,4.30e-10,99;UBERON:0000153,4.58e-10,62;UBERON:0007811,4.58e-10,62;UBERON:0007196,6.26e-10,15;UBERON:0001558,6.26e-10,15;UBERON:0000065,7.17e-10,54;UBERON:0005910,3.19e-09,6;UBERON:0003408,1.14e-08,10;UBERON:0001041,2.73e-08,87;UBERON:0000033,2.77e-08,56;UBERON:0001044,3.89e-08,6;UBERON:0003293,3.89e-08,6;UBERON:0003294,3.89e-08,6;UBERON:0010047,3.89e-08,6;UBERON:0000167,3.89e-08,6;UBERON:0004921,3.90e-08,118;UBERON:0001444,5.50e-08,49;UBERON:0005178,1.55e-07,34;UBERON:0002224,1.55e-07,34;UBERON:0001949,2.16e-07,3;UBERON:0003126,2.17e-07,7;UBERON:0001005,2.17e-07,7;UBERON:0004815,2.84e-07,3;UBERON:0002031,2.84e-07,3;UBERON:0005181,3.12e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.20525453575203,45.0516399994674,56.9279186490893,105.010138887368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.1889825921679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22664428346111,348.630590895963,922.882478090445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,63.2336375606675,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,147.844552669922,122.463008145285,40.1526433544605,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.220587945464788,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,23.5963113628545,41.5886487053192,20.4073813995611,16.4807432382183,0,0,0,0,0,0,0,0,3.1608175918371,2.57545848628462,0,0,0,2.81201501960331,0.16798212819886,2.69372684760534,0,0,0,0,0,0.829312462163088,0.864719720501769,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19705285616665,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,4.35965212697862,0.328014645699706,0,1.03041011647722,0,0,3.44559322797703,11.7010844286574,0,0,0,0,0,0,0,0.0852266274161009,0,4.13212288402445,2.11409074101617,1.78657797492418,7.28336022159959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,10.7768766252574,103.896852708047,5.44454924306613,1.22386941009813,119.680493602602,813.717227474631,1231.40553637135,70.5250838635366,0,0,0,0,0,0,0,0,0,0,18.1329759825963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0.146508179271894,0,1.33732061132974,0,13.6084356300483,322.800608065078,38.0879270603048,0,0,0,0,0,0.996239941255349,0.276283915531148,0,0,0.123084805461069,0,0.179736702294654,0.179021174675609,0,23.8717041641379,0,0,0,0.0927680981618513,0,0.260427761085233,0,4.34999745260876,4.66553137970549,24.9168577286911,0,2.75794698593172,0,0,0,0,0,0,0,0,0,575.401792637796,179.601903347862,0,0,0.0897576444097721,0,5.10401855571071,2.01514705484097,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,283.71369745153,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,1853.42820469554,0,0.698906672968121,0,1.16107597546902,0.146178634172371,0.821154570532092,1751.52464876437,0,3.16373037092745,0,0,0,15.4485592360494,0,2.56143593687223,203.605992164191,0,0,0,0.14405479798815,0.124252535565433,7.07082103850386,0,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.604651252380536,0,0,0,0.164831716762333,0.13480708770837,0,0,0,0,0,0,0,32.3962403834161,368.329730369584,0,35.5560768855222,0,0.419636705079985,0,0,0,0,0,1.5256112259285,0,0,0,0,0,0,0,0,0,0,0,0,105.017438325184,0.106787412567695,0,2.48543433208317,0,0,0,160.861996958086,0,0,0,0,0,0,0.122026264901963,0,0,0,0.310482014706917,0.138348634936231,0.249960815924213,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537266523244462,1.85280868296583,0,0,0,0,0,3.10887307558079,0,0,0.194860308839388,0.398594520940089,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,39.4460211768833,10.5753134205605,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,1.66851121451744,0.11796972334774,2.20114318226015,0,0,0,0.397832444232549,0,0,0,0.261906694481422,0.163771917510097,160.719565717928,0,0,0,0,0,0.548257766857182,78.4013661855085,0,40.7562144170309,0,0,0,0,7.62840383398694,0,0,0,0.131545547125698,0,0.111231401892069,2.98273752831953,0,0,0,0,0,0,0,0,0,0,1.86494547746733,51.5569800823729,129.265556759235,8.17431981758527,0,0,0.423387050190929,0,0,0,16.7783147696688,0.588901401691458,0.487671699929078,0,0.102662806856247,1.1598144313382,75.7709149172258,0,0,0,0,0,0,0,0,0,5.39326307858592,0,0,0,5.4945244585842,0,0,0,0,134.629669708666,0,0,0,2.75237570042724,0.286679166302903,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,544.599589775105,0.23806443146374,4.00451240983238,3.60033342915976,0.112131862580613,0.12729431655633,0.202117188958219,2338.27787241337,205.682213952254,439.808906185257,243.06655407578,16.9656781838467,3.5003405502719,0,0,0.808426818959282,7.03922827210363,16.1358706321384,146.889520371982,5.3260541934841,1.00636896795513,0 | |||
|short_description=p1@LY6D | |||
}} |
Latest revision as of 21:32, 16 September 2015
Short description: | p1@LY6D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LY6D_5end |
Coexpression cluster: | C3869_tongue_epidermoid_esophagus_Urothelial_Corneal_cervical_throat |
Association with transcript: | -1bp_to_ENST00000518434_5end |
EntrezGene: | LY6D |
HGNC: | 13348 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.07e-21 | 42 |
respiratory epithelial cell | 1.70e-16 | 13 |
endodermal cell | 6.31e-15 | 58 |
epithelial cell of alimentary canal | 2.68e-12 | 20 |
epithelial cell | 7.72e-11 | 253 |
epithelial cell of tracheobronchial tree | 9.64e-11 | 9 |
epithelial cell of lower respiratory tract | 9.64e-11 | 9 |
general ecto-epithelial cell | 2.69e-10 | 14 |
acinar cell | 5.94e-10 | 5 |
transitional epithelial cell | 1.04e-09 | 4 |
urothelial cell | 1.04e-09 | 4 |
protein secreting cell | 3.21e-08 | 6 |
gingival epithelial cell | 2.16e-07 | 3 |
bronchial epithelial cell | 2.84e-07 | 3 |
duct epithelial cell | 8.59e-07 | 3 |
branched duct epithelial cell | 8.59e-07 | 3 |
tracheal epithelial cell | 8.59e-07 | 3 |
tracheoblast | 8.59e-07 | 3 |
acinar cell of salivary gland | 8.77e-07 | 3 |