FFCP PHASE1:Mm9::chr5:12383377..12383395,+: Difference between revisions
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{{FFCP|EntrezGene=108151|HGNC=|UniProt=G3XA58|association_with_transcript=-110bp_to_ENSMUST00000170561_5end|description=CAGE_peak_2_at_Sema3d_5end|id=chr5:12383377..12383395,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0010707,2.50e-07,13;UBERON:0000026,6.91e-07,12;UBERON:0004708,6.91e-07,12;UBERON:0002101,6.91e-07,12;UBERON:0004357,6.91e-07,12;UBERON:0004347,6.91e-07,12;UBERON:0005732,6.91e-07,12;UBERON:0005733,6.91e-07,12;UBERON:0003102,7.41e-07,22|phase1_expression=1.60148847104794,1.04692622291808,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0,0.157731082679119,0,0.84877930359606,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,3.08711323243136,3.43840127926508,10.3134418455488,0,0,0,0.677689064138264,2.66788438833342,0,0,0,1.49800055259202,0.768436610643109,0,0,0,0.285650984403804,0,0,0,0,0,0.510749352340751,0.153606533256243,0.131886287730194,0.0914876436024097,0,0.279182999001381,1.68828783009504,0.916789486660861,0,0,0,0,0.226714680320357,3.18850937571846,0.860423876981386,0,0,0,0,2.10666630197628,0,0,0,1.26759077799012,0,0,0,0.216491041011214,0,0,0.11418387971906,3.6251303710604,0,3.64319186208885,5.1759131313064,3.92046345335299,2.26083960828934,4.58595957829249,0.125666591329675,0,2.4581890676385,0,6.47067399789637,8.17113618303456,13.091631834651,0,0.292780797011547,0.628340120440365,0,0,0,0,0.748953197024114,0,0.251308704225729,1.56441888173049,0.255715457330331,0,0.648965052271031,13.4427960282417,10.698999472468,0,0.841767423545896,1.69156575851515,0.919608417733892,1.44049703844279,1.50704817835715,1.56483948048054,1.15302348256365,1.40552586839593,1.03481348295606,1.5089759505299,7.18603104637713,5.27853372491847,6.57587197282724,11.6779844674751,6.61679116392116,11.7295817752528,6.76716507182877,0,0,0,4.34964122324554,3.51789089971644,4.14142741360334,3.31442629819294,4.72234156193769,4.47374627373397,2.09280550275367,1.3413670069981,1.40118410840603,1.6455984991348,1.31333971263276,1.37816976227955,1.02339991197733,0.878200461164203,0.805238512562231,0.210289948564127,0,0,0.264450566663544,2.77274725695804,3.94802342162745,2.44848176511977,1.61346819698674,2.66853652613844,1.52180500890047,0,1.31759163779209,2.26201687920243,1.39269530428806,0.58489226135736,0,0.432276099749388,0.199141273254367,1.70701110857774,4.91268604221834,3.38123207019241,2.8511185898344,1.55161989734101,1.19230893813542,8.72664212314751,1.77132177575523,0.941992367048249,0.370191491765402,0,1.00107063429656,1.37591296579242,0.224862112384854,0.405720242777006,0,0.25462585178142,0.863088412352432,0.486405680325106,0.549122826376163,0,0.744281895337007,1.5601883655728,1.01031551178845,0,0,1.66277871149944,8.14813070613084,3.91115943460862,3.05541154395339,2.58159273117352,1.84256883185997,1.6663054862021,1.17080188714679,0.945810864637146,0.44292937929755,1.11618338060241,1.80249646187312,1.20879487306127,1.01254341007058,0,0,0,0.827810238914197,0.963303539926752,1.05490517932983,0,2.52470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0.963963949265421,25.8330955079049,8.54714897602825,9.61033060186099,0,0,1.69946445308487,1.81394134178851,1.88605079755898,2.36241514304618,5.84126781093462,5.68542244970086,6.18007340111759,6.41695281092498,1.8962205476149,0,0,0,1.44048875225048,0.129358683782755,1.92903331528433,1.06404140185364,0.891844088010353,1.64549020602121,0.608929898229199,0.23467170806371,0,0,4.78170133530292,2.42196640043858,2.17126529741361,2.50681922406587,2.79039529566604,0,1.29797711407357,1.70870880797853,5.77883230297023,2.96311243791539,0.565105371014073,1.36694227721025,2.0590035588587,1.69978429993855,1.95932033253121,2.21119958087078,0.954670618015114,4.9032079005076,4.47302827679067,3.24016022465404,4.80903080833278,2.18362563746178,2.42755823492677,1.73572257023205,0,0.259229946583586,1.24267862617385,0,1.64468200648377,1.15820943319968,2.52786544847262,2.45403664607689,2.02747350588934,1.40828686374905,1.0416350787516,0.209718688851422,0,0,0.316011120628178,2.43270258348197,2.15693010046137,1.94881234466693,1.25318686967237,0.596044064343795,0.360586348559907,0.295379054349154,0.100966449948148,0.228620419965,0.504130925684203,0.194915761479505,0,0,0.906921534460845,0,0,0,1.54551675225752,0.750729901804728,0,1.92931541171159,0,1.12950368523413,0.920650473014354,0,0.515559547031063,0.685082519770642,0.755393897389701,0,0.900642406448441,1.35942722695261,0,0.518936737920883,2.79317411380722,4.78054096111576,1.94485373654635,1.46729213839588,2.75765262675021,5.33392146723877,5.15087643097235,2.56735367673452,4.29585259998456,3.54871019846336,2.82939512079114,2.52832070168682,3.13723246783859,2.35485422718014,1.90517476513229,3.59241410429052,2.70072908649187,2.88460130562315,3.53277408322554,2.74295401908332,1.77475806159337,1.1921809497366,3.92435324907287,3.67026583619789,2.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=108151 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=G3XA58 | |||
|association_with_transcript=-110bp_to_ENSMUST00000170561_5end | |||
|cluster_id=chr5:12383377..12383395,+ | |||
|description=CAGE_peak_2_at_Sema3d_5end | |||
|id=chr5:12383377..12383395,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010707,2.50e-07,13;UBERON:0000026,6.91e-07,12;UBERON:0004708,6.91e-07,12;UBERON:0002101,6.91e-07,12;UBERON:0004357,6.91e-07,12;UBERON:0004347,6.91e-07,12;UBERON:0005732,6.91e-07,12;UBERON:0005733,6.91e-07,12;UBERON:0003102,7.41e-07,22 | |||
|phase1_expression=1.60148847104794,1.04692622291808,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0,0.157731082679119,0,0.84877930359606,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,3.08711323243136,3.43840127926508,10.3134418455488,0,0,0,0.677689064138264,2.66788438833342,0,0,0,1.49800055259202,0.768436610643109,0,0,0,0.285650984403804,0,0,0,0,0,0.510749352340751,0.153606533256243,0.131886287730194,0.0914876436024097,0,0.279182999001381,1.68828783009504,0.916789486660861,0,0,0,0,0.226714680320357,3.18850937571846,0.860423876981386,0,0,0,0,2.10666630197628,0,0,0,1.26759077799012,0,0,0,0.216491041011214,0,0,0.11418387971906,3.6251303710604,0,3.64319186208885,5.1759131313064,3.92046345335299,2.26083960828934,4.58595957829249,0.125666591329675,0,2.4581890676385,0,6.47067399789637,8.17113618303456,13.091631834651,0,0.292780797011547,0.628340120440365,0,0,0,0,0.748953197024114,0,0.251308704225729,1.56441888173049,0.255715457330331,0,0.648965052271031,13.4427960282417,10.698999472468,0,0.841767423545896,1.69156575851515,0.919608417733892,1.44049703844279,1.50704817835715,1.56483948048054,1.15302348256365,1.40552586839593,1.03481348295606,1.5089759505299,7.18603104637713,5.27853372491847,6.57587197282724,11.6779844674751,6.61679116392116,11.7295817752528,6.76716507182877,0,0,0,4.34964122324554,3.51789089971644,4.14142741360334,3.31442629819294,4.72234156193769,4.47374627373397,2.09280550275367,1.3413670069981,1.40118410840603,1.6455984991348,1.31333971263276,1.37816976227955,1.02339991197733,0.878200461164203,0.805238512562231,0.210289948564127,0,0,0.264450566663544,2.77274725695804,3.94802342162745,2.44848176511977,1.61346819698674,2.66853652613844,1.52180500890047,0,1.31759163779209,2.26201687920243,1.39269530428806,0.58489226135736,0,0.432276099749388,0.199141273254367,1.70701110857774,4.91268604221834,3.38123207019241,2.8511185898344,1.55161989734101,1.19230893813542,8.72664212314751,1.77132177575523,0.941992367048249,0.370191491765402,0,1.00107063429656,1.37591296579242,0.224862112384854,0.405720242777006,0,0.25462585178142,0.863088412352432,0.486405680325106,0.549122826376163,0,0.744281895337007,1.5601883655728,1.01031551178845,0,0,1.66277871149944,8.14813070613084,3.91115943460862,3.05541154395339,2.58159273117352,1.84256883185997,1.6663054862021,1.17080188714679,0.945810864637146,0.44292937929755,1.11618338060241,1.80249646187312,1.20879487306127,1.01254341007058,0,0,0,0.827810238914197,0.963303539926752,1.05490517932983,0,2.52470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0.963963949265421,25.8330955079049,8.54714897602825,9.61033060186099,0,0,1.69946445308487,1.81394134178851,1.88605079755898,2.36241514304618,5.84126781093462,5.68542244970086,6.18007340111759,6.41695281092498,1.8962205476149,0,0,0,1.44048875225048,0.129358683782755,1.92903331528433,1.06404140185364,0.891844088010353,1.64549020602121,0.608929898229199,0.23467170806371,0,0,4.78170133530292,2.42196640043858,2.17126529741361,2.50681922406587,2.79039529566604,0,1.29797711407357,1.70870880797853,5.77883230297023,2.96311243791539,0.565105371014073,1.36694227721025,2.0590035588587,1.69978429993855,1.95932033253121,2.21119958087078,0.954670618015114,4.9032079005076,4.47302827679067,3.24016022465404,4.80903080833278,2.18362563746178,2.42755823492677,1.73572257023205,0,0.259229946583586,1.24267862617385,0,1.64468200648377,1.15820943319968,2.52786544847262,2.45403664607689,2.02747350588934,1.40828686374905,1.0416350787516,0.209718688851422,0,0,0.316011120628178,2.43270258348197,2.15693010046137,1.94881234466693,1.25318686967237,0.596044064343795,0.360586348559907,0.295379054349154,0.100966449948148,0.228620419965,0.504130925684203,0.194915761479505,0,0,0.906921534460845,0,0,0,1.54551675225752,0.750729901804728,0,1.92931541171159,0,1.12950368523413,0.920650473014354,0,0.515559547031063,0.685082519770642,0.755393897389701,0,0.900642406448441,1.35942722695261,0,0.518936737920883,2.79317411380722,4.78054096111576,1.94485373654635,1.46729213839588,2.75765262675021,5.33392146723877,5.15087643097235,2.56735367673452,4.29585259998456,3.54871019846336,2.82939512079114,2.52832070168682,3.13723246783859,2.35485422718014,1.90517476513229,3.59241410429052,2.70072908649187,2.88460130562315,3.53277408322554,2.74295401908332,1.77475806159337,1.1921809497366,3.92435324907287,3.67026583619789,2.36920902096694,2.37806364734604,3.94604567156764,2.17286582153379,5.61142271657738,4.03359061622192,2.9551344712669,3.27384834535751,3.40861050609125,4.24394544158511,5.24602213669686,3.97683734357194,6.44613162144895,5.35607329792761,8.38247392654159,9.04284558919644 | |||
|short_description=p2@Sema3d | |||
}} |
Latest revision as of 21:02, 1 October 2015
Short description: | p2@Sema3d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sema3d_5end |
Coexpression cluster: | NA |
Association with transcript: | -110bp_to_ENSMUST00000170561_5end |
EntrezGene: | Sema3d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
appendage girdle complex | 2.50e-07 | 13 |
appendage | 6.91e-07 | 12 |
paired limb/fin | 6.91e-07 | 12 |
limb | 6.91e-07 | 12 |
paired limb/fin bud | 6.91e-07 | 12 |
limb bud | 6.91e-07 | 12 |
limb/fin field | 6.91e-07 | 12 |
limb field | 6.91e-07 | 12 |
surface structure | 7.41e-07 | 22 |