Personal tools

FFCP PHASE1:Mm9::chr5:87998007..87998027,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=53315|HGNC=|MCL_coexpression_id=1088|UniProt=E9QA95,Q3UZZ6,Q6NZD1|association_with_transcript=3bp_to_ENSMUST00000076439,NM_016771,uc008xyo.2_5end|description=CAGE_peak_2_at_Sult1d1_5end|id=chr5:87998007..87998027,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,3.16e-07,9;CL:0002251,3.16e-07,9;CL:0000066,9.11e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.96e-13!59;UBERON:0000160!5.10e-13!43;UBERON:0005172!3.60e-12!49;UBERON:0005173!3.60e-12!49;UBERON:0002417!3.60e-12!49;UBERON:0000916!3.60e-12!49;UBERON:0009854!8.76e-12!23;UBERON:0009856!8.76e-12!23;UBERON:0001007!2.15e-11!128;UBERON:0001555!2.15e-11!128;UBERON:0007026!2.15e-11!128;UBERON:0004119!2.81e-11!130;UBERON:0000925!2.81e-11!130;UBERON:0006595!2.81e-11!130;UBERON:0002107!2.90e-11!22;UBERON:0007499!2.90e-11!22;UBERON:0006925!2.90e-11!22;UBERON:0009497!2.90e-11!22;UBERON:0000015!2.90e-11!22;UBERON:0002423!2.90e-11!22;UBERON:0006235!2.90e-11!22;UBERON:0008835!2.90e-11!22;UBERON:0003894!2.90e-11!22;UBERON:0004161!2.90e-11!22;UBERON:0008836!2.90e-11!22;UBERON:0004921!1.49e-10!126;UBERON:0004185!1.49e-10!126;UBERON:0000344!8.48e-10!15;UBERON:0002365!5.58e-09!25;UBERON:0002330!5.58e-09!25;UBERON:0001242!9.49e-09!13;UBERON:0000060!9.49e-09!13;UBERON:0001262!9.49e-09!13;UBERON:0004786!9.49e-09!13;UBERON:0009569!1.02e-08!66|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.76e-21,31;UBERON:0005409,1.01e-18,47;UBERON:0001007,5.91e-13,116;UBERON:0001555,5.91e-13,116;UBERON:0007026,5.91e-13,116;UBERON:0004119,1.93e-12,118;UBERON:0000925,1.93e-12,118;UBERON:0006595,1.93e-12,118;UBERON:0004921,6.08e-12,114;UBERON:0000344,1.15e-11,15;UBERON:0009854,1.37e-11,23;UBERON:0009856,1.37e-11,23;UBERON:0002107,5.70e-11,22;UBERON:0007499,5.70e-11,22;UBERON:0006925,5.70e-11,22;UBERON:0009497,5.70e-11,22;UBERON:0000015,5.70e-11,22;UBERON:0002423,5.70e-11,22;UBERON:0006235,5.70e-11,22;UBERON:0008835,5.70e-11,22;UBERON:0003894,5.70e-11,22;UBERON:0004161,5.70e-11,22;UBERON:0008836,5.70e-11,22;UBERON:0001242,2.22e-10,13;UBERON:0001262,2.22e-10,13;UBERON:0004786,2.22e-10,13;UBERON:0002365,5.83e-09,25;UBERON:0002330,5.83e-09,25;UBERON:0005172,6.15e-09,49;UBERON:0005173,6.15e-09,49;UBERON:0002417,6.15e-09,49;UBERON:0000916,6.15e-09,49;UBERON:0003350,3.16e-07,9;UBERON:0004808,3.16e-07,9;UBERON:0001277,3.16e-07,9|phase1_expression=0,24.4282785347553,27.2999543633722,37.2030979907401,28.5510566069418,5.03637815735669,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0351082378262,0,0,10.0795226359846,6.19405058881359,39.0477735598214,24.9841957772263,19.39241094173,11.5914285868388,37.8045194639896,2.66076612786366,0,0,0,1.73310971850765,1.99481574430191,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.6961073252927,31.9586526842643,17.810205324048,52.6318898132612,80.1968127904231,28.9315505471409,0,0,0,0,0,0,0,0,0,0,110.758363327488,0,0.148442139064825,0,0,0.230615497256059,0.301445281105245,0.823120949949934,0.502666365318702,3.46072954828123,0,0,0,0,0,5.59175283654366,0,0,31.1657607354481,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.497627882440372,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,102.099403941994,24.5939026997096,0.426576501070468,0.696710015581316,1.54640953586512,13.5127961497639,14.0098167622268,23.7782032640699,22.302865892592,64.0678933876402,28.4008785944305,24.0737331169792,18.7165523634355,20.6728463990471,35.8789162791992,64.7209138076693,1.13800740571849,5.02693455482807,10.1436962105772,16.6994088833158,20.1710586654331,28.3348712356887,14.6076400757034,93.4372236710882,106.916133659976,269.005817349525,78.2634935510073,0.166845105716094,0.393117990226406,0,0.811440485554012,1.68824011826692,2.5462585178142,5.4662266115654,44.7493225899098,18.9447375099776,23.0029130443767,40.9355042435354,35.5722947350599,58.3457208057828,34.2649059826852,160.653692614001,1.84753190166605,0,0,0,0,0,0.238043640886014,0,0.315270288212382,0,0,0.327726629431476,0.518054945597687,0.578596234326046,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0.283076530788832,0,0,0,0,0.425820255624806,0.178065603667255,0,2.14461159864296,0,0,0,0,0,0.307435147943927,9.30341855405596,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,25.358832786797,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0.158167996790568,0.609958401380546,1.72808545314882,1.25452977608681,3.71216358368502,1.48350781023303,4.05001933054146,3.40282724579238,4.79575401179634,0,0,0,0,0,0,0,0,0.651021924219751,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8356743823001,5.31139710375069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.419226325255965,1.10306105070008,1.55572709461131,1.03017528619447,1.28367683836726,3.03236654116557,1.77435509923168,0.754505365544305,1.77918864192777,1.72867911493147,1.7230640686684,1.42888107384922,1.97003354106254,1.54327376370964,2.47251540481984,1.91358596174717,1.71434626192708,0.887379030796687,1.90748951957857,1.45346416632329,1.03520318456864,2.11536519729191,2.0122077016005,0.789209134313529,1.62964936615034,1.68342681497322,0.949080144993393,1.37906275325789,2.04615521584845,0.929621047115796,0.964533054905707,0,2.33931608445408,4.94203424311086,0,0.441182838239031,0|short_description=p2@Sult1d1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=53315
|HGNC=
|MCL_coexpression_id=1088
|TSSclassifier=NA
|UniProt=E9QA95,Q3UZZ6,Q6NZD1
|association_with_transcript=3bp_to_ENSMUST00000076439,NM_016771,uc008xyo.2_5end
|cluster_id=chr5:87998007..87998027,-
|description=CAGE_peak_2_at_Sult1d1_5end
|id=chr5:87998007..87998027,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002563,3.16e-07,9;CL:0002251,3.16e-07,9;CL:0000066,9.11e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!2.96e-13!59;UBERON:0000160!5.10e-13!43;UBERON:0005172!3.60e-12!49;UBERON:0005173!3.60e-12!49;UBERON:0002417!3.60e-12!49;UBERON:0000916!3.60e-12!49;UBERON:0009854!8.76e-12!23;UBERON:0009856!8.76e-12!23;UBERON:0001007!2.15e-11!128;UBERON:0001555!2.15e-11!128;UBERON:0007026!2.15e-11!128;UBERON:0004119!2.81e-11!130;UBERON:0000925!2.81e-11!130;UBERON:0006595!2.81e-11!130;UBERON:0002107!2.90e-11!22;UBERON:0007499!2.90e-11!22;UBERON:0006925!2.90e-11!22;UBERON:0009497!2.90e-11!22;UBERON:0000015!2.90e-11!22;UBERON:0002423!2.90e-11!22;UBERON:0006235!2.90e-11!22;UBERON:0008835!2.90e-11!22;UBERON:0003894!2.90e-11!22;UBERON:0004161!2.90e-11!22;UBERON:0008836!2.90e-11!22;UBERON:0004921!1.49e-10!126;UBERON:0004185!1.49e-10!126;UBERON:0000344!8.48e-10!15;UBERON:0002365!5.58e-09!25;UBERON:0002330!5.58e-09!25;UBERON:0001242!9.49e-09!13;UBERON:0000060!9.49e-09!13;UBERON:0001262!9.49e-09!13;UBERON:0004786!9.49e-09!13;UBERON:0009569!1.02e-08!66
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.76e-21,31;UBERON:0005409,1.01e-18,47;UBERON:0001007,5.91e-13,116;UBERON:0001555,5.91e-13,116;UBERON:0007026,5.91e-13,116;UBERON:0004119,1.93e-12,118;UBERON:0000925,1.93e-12,118;UBERON:0006595,1.93e-12,118;UBERON:0004921,6.08e-12,114;UBERON:0000344,1.15e-11,15;UBERON:0009854,1.37e-11,23;UBERON:0009856,1.37e-11,23;UBERON:0002107,5.70e-11,22;UBERON:0007499,5.70e-11,22;UBERON:0006925,5.70e-11,22;UBERON:0009497,5.70e-11,22;UBERON:0000015,5.70e-11,22;UBERON:0002423,5.70e-11,22;UBERON:0006235,5.70e-11,22;UBERON:0008835,5.70e-11,22;UBERON:0003894,5.70e-11,22;UBERON:0004161,5.70e-11,22;UBERON:0008836,5.70e-11,22;UBERON:0001242,2.22e-10,13;UBERON:0001262,2.22e-10,13;UBERON:0004786,2.22e-10,13;UBERON:0002365,5.83e-09,25;UBERON:0002330,5.83e-09,25;UBERON:0005172,6.15e-09,49;UBERON:0005173,6.15e-09,49;UBERON:0002417,6.15e-09,49;UBERON:0000916,6.15e-09,49;UBERON:0003350,3.16e-07,9;UBERON:0004808,3.16e-07,9;UBERON:0001277,3.16e-07,9
|phase1_expression=0,24.4282785347553,27.2999543633722,37.2030979907401,28.5510566069418,5.03637815735669,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0351082378262,0,0,10.0795226359846,6.19405058881359,39.0477735598214,24.9841957772263,19.39241094173,11.5914285868388,37.8045194639896,2.66076612786366,0,0,0,1.73310971850765,1.99481574430191,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.6961073252927,31.9586526842643,17.810205324048,52.6318898132612,80.1968127904231,28.9315505471409,0,0,0,0,0,0,0,0,0,0,110.758363327488,0,0.148442139064825,0,0,0.230615497256059,0.301445281105245,0.823120949949934,0.502666365318702,3.46072954828123,0,0,0,0,0,5.59175283654366,0,0,31.1657607354481,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.497627882440372,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,102.099403941994,24.5939026997096,0.426576501070468,0.696710015581316,1.54640953586512,13.5127961497639,14.0098167622268,23.7782032640699,22.302865892592,64.0678933876402,28.4008785944305,24.0737331169792,18.7165523634355,20.6728463990471,35.8789162791992,64.7209138076693,1.13800740571849,5.02693455482807,10.1436962105772,16.6994088833158,20.1710586654331,28.3348712356887,14.6076400757034,93.4372236710882,106.916133659976,269.005817349525,78.2634935510073,0.166845105716094,0.393117990226406,0,0.811440485554012,1.68824011826692,2.5462585178142,5.4662266115654,44.7493225899098,18.9447375099776,23.0029130443767,40.9355042435354,35.5722947350599,58.3457208057828,34.2649059826852,160.653692614001,1.84753190166605,0,0,0,0,0,0.238043640886014,0,0.315270288212382,0,0,0.327726629431476,0.518054945597687,0.578596234326046,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0.283076530788832,0,0,0,0,0.425820255624806,0.178065603667255,0,2.14461159864296,0,0,0,0,0,0.307435147943927,9.30341855405596,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,25.358832786797,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0.158167996790568,0.609958401380546,1.72808545314882,1.25452977608681,3.71216358368502,1.48350781023303,4.05001933054146,3.40282724579238,4.79575401179634,0,0,0,0,0,0,0,0,0.651021924219751,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8356743823001,5.31139710375069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.419226325255965,1.10306105070008,1.55572709461131,1.03017528619447,1.28367683836726,3.03236654116557,1.77435509923168,0.754505365544305,1.77918864192777,1.72867911493147,1.7230640686684,1.42888107384922,1.97003354106254,1.54327376370964,2.47251540481984,1.91358596174717,1.71434626192708,0.887379030796687,1.90748951957857,1.45346416632329,1.03520318456864,2.11536519729191,2.0122077016005,0.789209134313529,1.62964936615034,1.68342681497322,0.949080144993393,1.37906275325789,2.04615521584845,0.929621047115796,0.964533054905707,0,2.33931608445408,4.94203424311086,0,0.441182838239031,0
|short_description=p2@Sult1d1
}}

Latest revision as of 06:45, 26 September 2015

Short description:p2@Sult1d1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Sult1d1_5end
Coexpression cluster:MCL_coexpression_mm9:1088
Association with transcript: 3bp_to_ENSMUST00000076439, NM_016771, uc008xyo.2_5end
EntrezGene:Sult1d1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Sult1d1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I524.43
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I627.30
CD326+ enterocyte, pool1.CNhs13542.11848-124I337.20
CD326+ enterocyte, pool2.CNhs13197.11849-124I428.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D110.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.19
GP2+ M cell, pool1.CNhs13228.11845-124H939.05
GP2+ M cell, pool2.CNhs13231.11846-124I124.98
GP2+ M cell, pool3.CNhs13240.11847-124I219.39
Ileum epithelium, pool1.CNhs13199.10252-104B911.59
Ileum epithelium, pool2.CNhs13232.10253-104C137.80
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F732.70
Mouse hepatocyte, donor1.CNhs13078.11714-123C431.96
Mouse hepatocyte, donor3.CNhs12615.11637-122C817.81
Mouse hepatocyte, donor6.CNhs13090.11822-124F452.63
Mouse hepatocyte, donor8.CNhs13091.11824-124F680.20
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A728.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6110.76
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H731.17
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I3102.10
intestine, adult.CNhs10496.178-9A324.59
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H413.51
intestine, embryo E17.CNhs10582.482-18D314.01
intestine, embryo E18.CNhs10526.1289-20F723.78
intestine, neonate N00.CNhs11126.644-26D122.30
intestine, neonate N01.CNhs11192.1322-23E964.07
intestine, neonate N06.CNhs11102.688-20B828.40
intestine, neonate N07.CNhs11095.720-20F224.07
intestine, neonate N10.CNhs11098.755-23A518.72
intestine, neonate N20.CNhs11187.827-18D120.67
intestine, neonate N25.CNhs11121.1352-25E335.88
intestine, neonate N30.CNhs11131.1384-42G164.72
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F85.03
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I216.70
kidney, embryo E18.CNhs11001.1288-20C720.17
kidney, neonate N00.CNhs11214.646-21G728.33
kidney, neonate N10.CNhs11206.758-6D514.61
kidney, neonate N20.CNhs11113.832-19I193.44
kidney, neonate N25.CNhs11122.1353-25F3106.92
kidney, neonate N30.CNhs11203.1385-42H1269.01
liver, adult pregnant day01.CNhs10466.508-5B278.26
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G45.47
liver, neonate N00.CNhs11117.641-24F444.75
liver, neonate N03.CNhs11123.1345-25G218.94
liver, neonate N06.CNhs11101.684-20A823.00
liver, neonate N07.CNhs11103.716-20H240.94
liver, neonate N10.CNhs11115.751-24B935.57
liver, neonate N20.CNhs11220.823-25A358.35
liver, neonate N25.CNhs11198.1368-26H134.26
liver, neonate N30.CNhs11106.1382-42D1160.65
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G99.30
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I125.36
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D41.73
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C63.71
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A94.05
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I14.80
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F523.84
uterus, adult.CNhs10509.92-27E55.31
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal epithelial cell3.16e-079
epithelial cell of alimentary canal3.16e-079
epithelial cell9.11e-0725

Uber anatomy
Ontology termp-valuen
intestine3.76e-2131
gastrointestinal system1.01e-1847
digestive system5.91e-13116
digestive tract5.91e-13116
primitive gut5.91e-13116
endoderm-derived structure1.93e-12118
endoderm1.93e-12118
presumptive endoderm1.93e-12118
subdivision of digestive tract6.08e-12114
mucosa1.15e-1115
digestive tract diverticulum1.37e-1123
sac1.37e-1123
liver5.70e-1122
epithelial sac5.70e-1122
digestive gland5.70e-1122
epithelium of foregut-midgut junction5.70e-1122
anatomical boundary5.70e-1122
hepatobiliary system5.70e-1122
foregut-midgut junction5.70e-1122
hepatic diverticulum5.70e-1122
liver primordium5.70e-1122
septum transversum5.70e-1122
liver bud5.70e-1122
intestinal mucosa2.22e-1013
wall of intestine2.22e-1013
gastrointestinal system mucosa2.22e-1013
exocrine gland5.83e-0925
exocrine system5.83e-0925
abdomen element6.15e-0949
abdominal segment element6.15e-0949
abdominal segment of trunk6.15e-0949
abdomen6.15e-0949
epithelium of mucosa3.16e-079
gastrointestinal system epithelium3.16e-079
intestinal epithelium3.16e-079
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:87998007..87998027,-&oldid=4239004"