FFCP PHASE1:Mm9::chr5:98460490..98460506,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=142|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:98460490..98460506,-|id=chr5:98460490..98460506,-|ontology_enrichment_celltype=CL:0000988!1.04e-10!32;CL:0002032!1.04e-10!32;CL:0000037!1.04e-10!32;CL:0000566!1.04e-10!32;CL:0000837!1.04e-10!32;CL:0000791!9.23e-10!9;CL:0000789!9.23e-10!9;CL:0002420!9.23e-10!9;CL:0002419!9.23e-10!9;CL:0000790!9.23e-10!9;CL:0000838!1.16e-09!12;CL:0000542!7.73e-09!13;CL:0000051!7.73e-09!13;CL:0000084!7.45e-08!11;CL:0000827!7.45e-08!11;CL:0000624!7.61e-08!8|ontology_enrichment_celltype_v019_2=CL:0000838,2.18e-08,12;CL:0000542,9.28e-08,13;CL:0000051,9.28e-08,13;CL:0000624,1.93e-07,8;CL:0000945,2.37e-07,1;CL:0000236,2.37e-07,1;CL:0000826,2.37e-07,1;CL:0000355,4.50e-07,9|ontology_enrichment_disease=DOID:0060100!3.79e-09!3;DOID:4045!3.79e-09!3|ontology_enrichment_disease_v019_2=DOID:0060100,4.00e-20,3;DOID:4045,4.00e-20,3;DOID:0050686,2.32e-10,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.50e-07,9;UBERON:0002036,4.50e-07,9;UBERON:0002385,4.50e-07,9;UBERON:0000486,4.50e-07,9;UBERON:0007503,4.50e-07,9;UBERON:0001015,4.50e-07,9;UBERON:0002329,4.50e-07,9;UBERON:0003082,4.50e-07,9;UBERON:0003059,4.50e-07,9;UBERON:0007282,4.50e-07,9;UBERON:0004290,4.50e-07,9;UBERON:0009618,4.50e-07,9|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,1.68946466582,3.5109678948299,0,0,0,0.174840804837995,0,0,0,0.315462165358238,0,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1597968602132,14.8453715459522,3.66466620781659,13.5293242247133,49.1792749170081,8.25367600152961,0,0,0,0,0,0,0,0,0,1.51004345451963,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,1.07833612055328,0.599902730993408,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0.170870880797853,0,0,0,0,0,7.13909405974192,4.19854356970974,4.42239916174156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:98460490..98460506,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=142 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:98460490..98460506,- | |||
|description=CAGE_peak_at_chr5:98460490..98460506,- | |||
|id=chr5:98460490..98460506,- | |||
|ontology_enrichment_celltype=CL:0000988!1.04e-10!32;CL:0002032!1.04e-10!32;CL:0000037!1.04e-10!32;CL:0000566!1.04e-10!32;CL:0000837!1.04e-10!32;CL:0000791!9.23e-10!9;CL:0000789!9.23e-10!9;CL:0002420!9.23e-10!9;CL:0002419!9.23e-10!9;CL:0000790!9.23e-10!9;CL:0000838!1.16e-09!12;CL:0000542!7.73e-09!13;CL:0000051!7.73e-09!13;CL:0000084!7.45e-08!11;CL:0000827!7.45e-08!11;CL:0000624!7.61e-08!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.18e-08,12;CL:0000542,9.28e-08,13;CL:0000051,9.28e-08,13;CL:0000624,1.93e-07,8;CL:0000945,2.37e-07,1;CL:0000236,2.37e-07,1;CL:0000826,2.37e-07,1;CL:0000355,4.50e-07,9 | |||
|ontology_enrichment_disease=DOID:0060100!3.79e-09!3;DOID:4045!3.79e-09!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.00e-20,3;DOID:4045,4.00e-20,3;DOID:0050686,2.32e-10,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.50e-07,9;UBERON:0002036,4.50e-07,9;UBERON:0002385,4.50e-07,9;UBERON:0000486,4.50e-07,9;UBERON:0007503,4.50e-07,9;UBERON:0001015,4.50e-07,9;UBERON:0002329,4.50e-07,9;UBERON:0003082,4.50e-07,9;UBERON:0003059,4.50e-07,9;UBERON:0007282,4.50e-07,9;UBERON:0004290,4.50e-07,9;UBERON:0009618,4.50e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,1.68946466582,3.5109678948299,0,0,0,0.174840804837995,0,0,0,0.315462165358238,0,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1597968602132,14.8453715459522,3.66466620781659,13.5293242247133,49.1792749170081,8.25367600152961,0,0,0,0,0,0,0,0,0,1.51004345451963,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,1.07833612055328,0.599902730993408,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0.170870880797853,0,0,0,0,0,7.13909405974192,4.19854356970974,4.42239916174156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:98460490..98460506,- | |||
}} |
Latest revision as of 20:24, 4 August 2015
Short description: | p@chr5:98460490..98460506, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:98460490..98460506, - |
Coexpression cluster: | MCL_coexpression_mm9:142 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.18e-08 | 12 |
lymphocyte | 9.28e-08 | 13 |
common lymphoid progenitor | 9.28e-08 | 13 |
CD4-positive, alpha-beta T cell | 1.93e-07 | 8 |
lymphocyte of B lineage | 2.37e-07 | 1 |
B cell | 2.37e-07 | 1 |
pro-B cell | 2.37e-07 | 1 |
multi-potent skeletal muscle stem cell | 4.50e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.50e-07 | 9 |
striated muscle tissue | 4.50e-07 | 9 |
muscle tissue | 4.50e-07 | 9 |
multilaminar epithelium | 4.50e-07 | 9 |
epithelial vesicle | 4.50e-07 | 9 |
musculature | 4.50e-07 | 9 |
somite | 4.50e-07 | 9 |
myotome | 4.50e-07 | 9 |
presomitic mesoderm | 4.50e-07 | 9 |
presumptive segmental plate | 4.50e-07 | 9 |
dermomyotome | 4.50e-07 | 9 |
trunk paraxial mesoderm | 4.50e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.00e-20 | 3 |
muscle cancer | 4.00e-20 | 3 |
organ system cancer | 2.32e-10 | 6 |