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FFCP PHASE1:Mm9::chr6:125046187..125046207,+: Difference between revisions

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{{FFCP|EntrezGene=107932|HGNC=|MCL_coexpression_id=7|UniProt=|association_with_transcript=0bp_to_ENSMUST00000155932_5end|description=CAGE_peak_1_at_Chd4_5end|id=chr6:125046187..125046207,+|ontology_enrichment_celltype=CL:0000144!1.09e-21!121;CL:0000012!1.09e-21!121;CL:0002371!3.72e-20!118;CL:0000548!4.74e-20!115;CL:0000004!4.74e-20!115;CL:0000255!4.74e-20!115;CL:0000034!2.90e-15!97;CL:0000063!2.94e-14!66;CL:0000988!5.59e-13!32;CL:0002032!5.59e-13!32;CL:0000037!5.59e-13!32;CL:0000566!5.59e-13!32;CL:0000837!5.59e-13!32;CL:0000723!2.13e-12!91;CL:0000048!2.13e-12!91;CL:0002031!1.54e-10!25;CL:0000838!2.49e-08!12;CL:0000542!3.56e-08!13;CL:0000051!3.56e-08!13;CL:0002076!7.44e-08!15;CL:0000738!7.57e-08!17;CL:0002087!7.57e-08!17;CL:0000084!1.03e-07!11;CL:0000827!1.03e-07!11;CL:0002320!1.06e-07!46;CL:0000134!1.06e-07!46;CL:0002321!1.18e-07!70;CL:0000220!1.18e-07!70;CL:0000219!3.35e-07!54|ontology_enrichment_celltype_v019_2=CL:0000034,2.90e-15,97;CL:0000988,5.59e-13,32;CL:0002032,5.59e-13,32;CL:0000037,5.59e-13,32;CL:0000837,5.59e-13,32;CL:0000723,2.13e-12,91;CL:0000048,2.13e-12,91;CL:0002031,1.54e-10,25;CL:0000838,2.49e-08,12;CL:0000542,3.56e-08,13;CL:0000051,3.56e-08,13;CL:0002076,7.44e-08,15;CL:0000738,7.57e-08,17;CL:0002087,7.57e-08,17;CL:0000084,1.03e-07,11;CL:0000827,1.03e-07,11;CL:0002320,1.06e-07,46;CL:0000134,1.06e-07,46;CL:0002321,1.18e-07,70;CL:0000219,3.35e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!8.52e-10!48;UBERON:0002390!1.78e-09!45;UBERON:0003061!1.78e-09!45;UBERON:0002384!1.06e-07!46;UBERON:0002370!1.28e-07!23;UBERON:0000974!1.28e-07!23;UBERON:0004807!1.28e-07!23;UBERON:0005058!1.28e-07!23;UBERON:0003351!1.28e-07!23;UBERON:0009113!1.28e-07!23;UBERON:0003295!1.28e-07!23;UBERON:0009722!1.28e-07!23;UBERON:0005562!1.28e-07!23;UBERON:0007690!1.28e-07!23;UBERON:0000072!1.50e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.52e-10,48;UBERON:0002405,8.52e-10,48;UBERON:0002390,1.78e-09,45;UBERON:0003061,1.78e-09,45;UBERON:0002384,1.06e-07,46;UBERON:0002370,1.28e-07,23;UBERON:0000974,1.28e-07,23;UBERON:0004807,1.28e-07,23;UBERON:0005058,1.28e-07,23;UBERON:0003351,1.28e-07,23;UBERON:0009113,1.28e-07,23;UBERON:0003295,1.28e-07,23;UBERON:0009722,1.28e-07,23;UBERON:0005562,1.28e-07,23;UBERON:0007690,1.28e-07,23;UBERON:0000072,1.50e-07,27|phase1_expression=39.7169140819889,71.8889339737084,78.7148684143897,79.2456233623895,77.1379424117375,95.5233057178653,92.9778309570192,68.0479914537107,540.487904340249,454.085181064667,172.245276034858,153.481633907027,79.9507408778731,72.3840932029298,66.6219523631326,85.2420875711167,58.7631977627643,85.1747846467242,88.5759241093073,81.0584234934238,39.2900000497942,102.567552590515,83.3227327353204,52.7974995218242,46.5700840566355,52.8293406985819,54.2760115160434,53.4368657061005,31.3538642103017,38.0565495937495,36.36380374747,43.1820857952549,45.5147942812582,63.3926724061755,66.1470209230419,61.6730534280007,65.9467020727452,47.2940742732706,52.3494680830946,37.1701858221397,45.2938245783881,56.692775251551,34.4712350652119,24.9275699591643,25.8511174609762,27.1649193199289,24.2541316747892,46.6573834654156,40.6419438058773,44.7188767870852,60.614120563782,41.6882436658418,101.172911452815,94.2970784614748,115.616266905008,41.6760286378234,42.6934825508747,46.4104883049698,69.1922296139824,46.0222151966669,53.8756692980252,27.7852516296688,25.789549087223,36.4459385498967,44.4989863155138,39.0764063220355,27.5632101676932,49.179943081159,84.2996548067923,96.7992577838222,80.9751101202821,37.7059299413021,39.977205912242,64.5526511862808,99.9668262720205,55.1531271966013,44.0463523997555,32.4325838736377,32.5645850503236,73.8563211289085,85.2664838374458,70.8442183957194,23.451371916116,19.1339287410771,28.7260705820403,51.2653738724182,55.9520705540475,53.6830403976866,39.6805253065884,49.5749434300513,108.989047751831,32.6961073252927,23.7989966797713,34.5410042648203,20.1430689408777,39.8743929516629,23.7351070022661,32.0409006446749,47.0212668331192,44.1674468137925,45.4924245878678,80.8456807710202,193.651982177051,234.652012040599,58.669072114039,63.0866065032995,59.1463600667296,42.4764032554903,51.0107630784928,23.8991843894368,35.2175213335256,24.3572382649713,28.1350906652391,23.3620092856565,33.6303702408116,29.2803157798144,33.1241256764061,21.4007048241469,51.3074120130927,37.5299091877989,45.4933528028411,41.2143965164939,11.1835056730873,20.2018749937968,25.5524982312415,21.2029355823131,121.252905999991,77.987355029143,81.5790857809075,9.28701964309901,17.3850229071078,27.3926487606044,13.3844726548053,14.0643501531682,15.7918913865266,23.6872244078926,42.5688540894322,45.4085442726839,53.8299475463727,33.6706969418358,54.7807064872983,37.2441409182226,56.8996330184904,40.8410056334788,49.2584253855614,51.6298292747945,54.6281054183219,28.9747775227698,89.4607170671295,70.3474618224288,46.2751456551185,39.2360361045359,35.0339534024253,37.611233984394,32.5135775524551,49.36049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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=107932
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000155932_5end
|cluster_id=chr6:125046187..125046207,+
|description=CAGE_peak_1_at_Chd4_5end
|id=chr6:125046187..125046207,+
|ontology_enrichment_celltype=CL:0000144!1.09e-21!121;CL:0000012!1.09e-21!121;CL:0002371!3.72e-20!118;CL:0000548!4.74e-20!115;CL:0000004!4.74e-20!115;CL:0000255!4.74e-20!115;CL:0000034!2.90e-15!97;CL:0000063!2.94e-14!66;CL:0000988!5.59e-13!32;CL:0002032!5.59e-13!32;CL:0000037!5.59e-13!32;CL:0000566!5.59e-13!32;CL:0000837!5.59e-13!32;CL:0000723!2.13e-12!91;CL:0000048!2.13e-12!91;CL:0002031!1.54e-10!25;CL:0000838!2.49e-08!12;CL:0000542!3.56e-08!13;CL:0000051!3.56e-08!13;CL:0002076!7.44e-08!15;CL:0000738!7.57e-08!17;CL:0002087!7.57e-08!17;CL:0000084!1.03e-07!11;CL:0000827!1.03e-07!11;CL:0002320!1.06e-07!46;CL:0000134!1.06e-07!46;CL:0002321!1.18e-07!70;CL:0000220!1.18e-07!70;CL:0000219!3.35e-07!54
|ontology_enrichment_celltype_v019_2=CL:0000034,2.90e-15,97;CL:0000988,5.59e-13,32;CL:0002032,5.59e-13,32;CL:0000037,5.59e-13,32;CL:0000837,5.59e-13,32;CL:0000723,2.13e-12,91;CL:0000048,2.13e-12,91;CL:0002031,1.54e-10,25;CL:0000838,2.49e-08,12;CL:0000542,3.56e-08,13;CL:0000051,3.56e-08,13;CL:0002076,7.44e-08,15;CL:0000738,7.57e-08,17;CL:0002087,7.57e-08,17;CL:0000084,1.03e-07,11;CL:0000827,1.03e-07,11;CL:0002320,1.06e-07,46;CL:0000134,1.06e-07,46;CL:0002321,1.18e-07,70;CL:0000219,3.35e-07,54
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!8.52e-10!48;UBERON:0002390!1.78e-09!45;UBERON:0003061!1.78e-09!45;UBERON:0002384!1.06e-07!46;UBERON:0002370!1.28e-07!23;UBERON:0000974!1.28e-07!23;UBERON:0004807!1.28e-07!23;UBERON:0005058!1.28e-07!23;UBERON:0003351!1.28e-07!23;UBERON:0009113!1.28e-07!23;UBERON:0003295!1.28e-07!23;UBERON:0009722!1.28e-07!23;UBERON:0005562!1.28e-07!23;UBERON:0007690!1.28e-07!23;UBERON:0000072!1.50e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.52e-10,48;UBERON:0002405,8.52e-10,48;UBERON:0002390,1.78e-09,45;UBERON:0003061,1.78e-09,45;UBERON:0002384,1.06e-07,46;UBERON:0002370,1.28e-07,23;UBERON:0000974,1.28e-07,23;UBERON:0004807,1.28e-07,23;UBERON:0005058,1.28e-07,23;UBERON:0003351,1.28e-07,23;UBERON:0009113,1.28e-07,23;UBERON:0003295,1.28e-07,23;UBERON:0009722,1.28e-07,23;UBERON:0005562,1.28e-07,23;UBERON:0007690,1.28e-07,23;UBERON:0000072,1.50e-07,27
|phase1_expression=39.7169140819889,71.8889339737084,78.7148684143897,79.2456233623895,77.1379424117375,95.5233057178653,92.9778309570192,68.0479914537107,540.487904340249,454.085181064667,172.245276034858,153.481633907027,79.9507408778731,72.3840932029298,66.6219523631326,85.2420875711167,58.7631977627643,85.1747846467242,88.5759241093073,81.0584234934238,39.2900000497942,102.567552590515,83.3227327353204,52.7974995218242,46.5700840566355,52.8293406985819,54.2760115160434,53.4368657061005,31.3538642103017,38.0565495937495,36.36380374747,43.1820857952549,45.5147942812582,63.3926724061755,66.1470209230419,61.6730534280007,65.9467020727452,47.2940742732706,52.3494680830946,37.1701858221397,45.2938245783881,56.692775251551,34.4712350652119,24.9275699591643,25.8511174609762,27.1649193199289,24.2541316747892,46.6573834654156,40.6419438058773,44.7188767870852,60.614120563782,41.6882436658418,101.172911452815,94.2970784614748,115.616266905008,41.6760286378234,42.6934825508747,46.4104883049698,69.1922296139824,46.0222151966669,53.8756692980252,27.7852516296688,25.789549087223,36.4459385498967,44.4989863155138,39.0764063220355,27.5632101676932,49.179943081159,84.2996548067923,96.7992577838222,80.9751101202821,37.7059299413021,39.977205912242,64.5526511862808,99.9668262720205,55.1531271966013,44.0463523997555,32.4325838736377,32.5645850503236,73.8563211289085,85.2664838374458,70.8442183957194,23.451371916116,19.1339287410771,28.7260705820403,51.2653738724182,55.9520705540475,53.6830403976866,39.6805253065884,49.5749434300513,108.989047751831,32.6961073252927,23.7989966797713,34.5410042648203,20.1430689408777,39.8743929516629,23.7351070022661,32.0409006446749,47.0212668331192,44.1674468137925,45.4924245878678,80.8456807710202,193.651982177051,234.652012040599,58.669072114039,63.0866065032995,59.1463600667296,42.4764032554903,51.0107630784928,23.8991843894368,35.2175213335256,24.3572382649713,28.1350906652391,23.3620092856565,33.6303702408116,29.2803157798144,33.1241256764061,21.4007048241469,51.3074120130927,37.5299091877989,45.4933528028411,41.2143965164939,11.1835056730873,20.2018749937968,25.5524982312415,21.2029355823131,121.252905999991,77.987355029143,81.5790857809075,9.28701964309901,17.3850229071078,27.3926487606044,13.3844726548053,14.0643501531682,15.7918913865266,23.6872244078926,42.5688540894322,45.4085442726839,53.8299475463727,33.6706969418358,54.7807064872983,37.2441409182226,56.8996330184904,40.8410056334788,49.2584253855614,51.6298292747945,54.6281054183219,28.9747775227698,89.4607170671295,70.3474618224288,46.2751456551185,39.2360361045359,35.0339534024253,37.611233984394,32.5135775524551,49.3604981709863,53.3682022358058,68.711891199629,64.5051143627995,50.5386884986625,41.511112616654,42.8547706277215,44.2712655544343,38.7625536542386,41.3435862538174,33.9499559335595,35.4120889847497,38.6493283235331,35.0512480315713,30.0426459264744,33.4814183424384,30.5557973718945,24.5896129125977,23.3519168643047,17.8746456279508,31.6946206128196,20.4859645449955,28.2962106329992,47.9898563704276,52.4854878404591,51.8047194514815,33.6811486120982,30.2434139629024,17.8812088545806,37.9623249235609,33.1044898995262,30.1602250560323,27.8539060857611,31.1942539390592,25.1669434423182,20.533114738096,29.273767168392,47.9859789411297,56.5530137418158,59.7350999067326,45.4142461095051,47.7123118432359,45.6584187485974,46.7318009348261,35.5740456630841,23.3928104483648,32.3300569475117,20.4552312690133,46.5497844947902,33.4150291692445,37.3271106558857,34.0805003932685,24.3588931349941,15.786802810448,37.4004978686054,37.4532373850332,18.9447375099776,43.1304619582064,30.5155577088173,34.9482193888308,24.2475722829227,22.9628689308048,35.7008205808892,23.0941487708256,45.0989560013754,53.1265823201004,41.0783107575955,44.8258374231039,45.3941957667321,39.0391571053063,55.8082232873305,34.3644614151496,34.3270268955601,48.6337044405336,32.9365262578633,30.2198718265317,34.7157740595628,79.9193804878143,68.5321161611574,29.5058563811422,27.5936746304732,15.412856638828,24.0283957514016,15.5738198107842,27.0143892108679,65.9412178579976,58.5658116444958,68.0737936835645,92.0029872117325,81.989912062321,118.325989869732,95.94013629695,79.4935933518768,81.0339944790373,18.9579576688866,28.3880170416537,41.3112200508032,43.3279311880512,31.3443233647817,43.8058956521877,50.2555916840812,33.2555912661226,40.1728819880063,45.476491503639,35.9699123094395,41.3485269069154,44.7146487257332,44.5621722980902,30.97160227771,30.5713964867496,46.4109944616841,40.171873478947,55.2787558676122,50.4498866752743,41.1527107260657,48.9459044852675,57.9698657206729,33.8970982440369,45.0608124689607,30.7419937563461,17.7938939525609,23.155481795771,107.011178159021,40.6890355273682,56.1513331081131,56.2243740254773,57.9417376100066,30.3140070095045,19.0988061070825,33.1489508747834,53.0414250665482,40.9279905487063,40.3108497990039,51.9438065339896,35.2318386738045,79.2099483771366,77.3931531349829,74.2133859329756,10.5013767981662,57.4149828349761,47.9833942419363,30.7815221342134,33.2450390663005,30.1340337969725,35.334458752823,36.4501739748731,25.1285704304668,27.8672192577355,22.3682152711293,22.5477175473676,66.3853464435266,34.0844490341621,38.3068841037774,45.8517373345945,33.9601812236464,45.299894117261,48.1756223922615,44.8797994142042,28.9900944991207,37.1558708072646,26.8609452533952,47.4377003778984,48.8904156104578,55.9958747034296,48.8742879172224,53.8426471457228,58.4149884667049,53.9066774187207,69.9697498140663,53.7257986917749,57.6725778982728,64.0298276460173,55.1293852599088,48.270160600988,20.405734525369,97.4518335312144,126.317110106142,87.635769742049,33.4217997675689,30.4045610230915,26.923288767288,33.4414671363343,27.0848936179096,32.1908550291728,23.0162618253588,26.9260891316516,30.0743069101453,22.6077231524312,29.4603619981983,27.675922509504,24.3173449741079,24.9228324941313,28.9945774581019,85.1056250190249,75.8147259461959,36.5369916313847,37.6815411455856,33.5381060204772,37.5040757238029,35.3372297204568,41.0009763905399,16.3668796891826,26.0278128116711,29.1501194873776,42.063674129095,54.8739233773511,49.8755937233932,52.3811476875193,64.775942014498,47.1649206595562,54.0145817298374,35.0273015682811,46.5148587624696,30.1724942099166,36.3825402626642,42.9185141905178,34.1564079085972,49.0309871963873,37.653500511796,38.9636582219006,44.1957115215576,48.8894809845102,42.0856703743304,43.3017816153236,42.9479543157457,55.2461908279081,50.9742207501828,32.9870304777752,27.2293529952361,21.755639585423,30.2968186208101,37.4925130854933,25.1474217796248,19.245030356495
|short_description=p1@Chd4
}}

Latest revision as of 16:44, 26 September 2015

Short description:p1@Chd4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Chd4_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 0bp_to_ENSMUST00000155932_5end
EntrezGene:Chd4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Chd4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G739.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I571.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I678.71
CD326+ enterocyte, pool1.CNhs13542.11848-124I379.25
CD326+ enterocyte, pool2.CNhs13197.11849-124I477.14
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I795.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I892.98
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E968.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7540.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2454.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6172.25
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1153.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E479.95
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E872.38
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A166.62
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A385.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A558.76
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A285.17
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A488.58
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A681.06
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A339.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2102.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I983.32
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D152.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D246.57
GP2+ M cell, pool1.CNhs13228.11845-124H952.83
GP2+ M cell, pool2.CNhs13231.11846-124I154.28
GP2+ M cell, pool3.CNhs13240.11847-124I253.44
Ileum epithelium, pool1.CNhs13199.10252-104B931.35
Ileum epithelium, pool2.CNhs13232.10253-104C138.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C836.36
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I343.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G645.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E963.39
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F566.15
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F661.67
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F765.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G847.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H152.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H337.17
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G945.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H256.69
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H434.47
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D824.93
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D925.85
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B327.16
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B724.25
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C246.66
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B840.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C344.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C460.61
Mouse Astrocytes, donor3.CNhs12107.11633-122C441.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2101.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I994.30
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1115.62
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C141.68
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E142.69
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C546.41
Mouse Granule cells, donor1.CNhs12131.11713-123C369.19
Mouse Granule cells, donor2.CNhs12357.11731-123E346.02
Mouse Granule cells, donor3.CNhs12108.11636-122C753.88
Mouse Meningeal cells, donor1.CNhs12132.11716-123C627.79
Mouse Meningeal cells, donor3.CNhs12109.11639-122D125.79
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C736.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E744.50
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D239.08
Mouse Microglia, donor1.CNhs12629.11718-123C827.56
Mouse Microglia, donor2.CNhs12634.11736-123E849.18
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D584.30
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F596.80
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D980.98
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F137.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D539.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D264.55
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F299.97
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D655.15
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D344.05
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F332.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D732.56
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D473.86
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F485.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D870.84
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E423.45
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I628.73
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D651.27
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F655.95
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E153.68
Mouse Schwann, donor1.CNhs12507.11728-123D939.68
Mouse Schwann, donor2.CNhs12573.11746-123F949.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3108.99
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F732.70
Mouse hepatocyte, donor1.CNhs13078.11714-123C423.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C834.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F420.14
Mouse hepatocyte, donor8.CNhs13091.11824-124F639.87
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A723.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I732.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E347.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I844.17
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G645.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H180.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8193.65
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6234.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G158.67
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G263.09
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G359.15
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B642.48
accessory axillary lymph node, adult.CNhs10475.1063-29H951.01
adrenal gland, adult.CNhs10508.49-24D723.90
adrenal gland, embryo E14.CNhs11038.406-44C535.22
adrenal gland, embryo E16.CNhs11004.1254-43D624.36
adrenal gland, embryo E17.CNhs11043.1263-45I128.14
adrenal gland, embryo E18.CNhs11026.1262-18F523.36
adrenal gland, neonate N00.CNhs11191.1311-23C133.63
adrenal gland, neonate N25.CNhs11223.1377-27I329.28
amnion, adult pregnant day17.5.CNhs10488.583-22A833.12
aorta, adult.CNhs10498.46-23H121.40
bone (os femoris), adult.CNhs10483.56-12G251.31
bone (os femoris), neonate N02.CNhs11227.1985-43F537.53
bone (os femoris), neonate N16.CNhs11225.1525-43A645.49
bone (os femoris), neonate N20.CNhs11195.1350-25C341.21
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B220.20
cerebellum, neonate N30.CNhs11135.1395-42I225.55
colon, adult.CNhs10468.36-18H721.20
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7121.25
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D177.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D481.58
corpora quadrigemina, adult.CNhs10501.16-22A49.29
corpus striatum, adult.CNhs10487.19-21D817.39
corpus striatum, neonate N00.CNhs11226.630-43F127.39
cortex, adult.CNhs10473.12-14D513.38
cortex, neonate N30.CNhs11107.1392-42F214.06
diencephalon, adult.CNhs10482.20-12F215.79
diencephalon, neonate N30.CNhs11201.1388-42B223.69
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B142.57
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A245.41
epididymis, adult.CNhs10490.58-23B253.83
eyeball, adult.CNhs10484.31-12G433.67
eyeball, embryo E12.CNhs11016.345-16C654.78
eyeball, embryo E14.CNhs10521.399-16E237.24
eyeball, embryo E15.CNhs10593.426-16C956.90
eyeball, embryo E17.CNhs11023.1261-18D440.84
eyeball, neonate N00.CNhs11207.633-15C649.26
eyeball, neonate N01.CNhs11140.1532-43E751.63
eyeball, neonate N02.CNhs11205.1551-44G854.63
eyeball, neonate N16.CNhs11188.777-19A228.97
forelimb, embryo E11.CNhs10596.335-25E289.46
forelimb, embryo E12.CNhs10600.359-14H270.35
forelimb, embryo E13.CNhs10589.384-1E246.28
forelimb, embryo E14.CNhs10577.413-26A839.24
forelimb, embryo E15.CNhs11007.437-20E735.03
forelimb, embryo E17.CNhs10598.1517-43C437.61
forelimb, embryo E18.CNhs11008.1520-43B532.51
gonad, embryo E13.CNhs11044.1564-45I649.36
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C853.37
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D268.71
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D564.51
heart, embryo E11.CNhs10586.331-24E950.54
heart, embryo E12.CNhs11015.353-12F541.51
heart, embryo E13.CNhs11013.376-3I942.85
heart, embryo E14.CNhs10597.403-26D444.27
heart, embryo E15.CNhs11017.431-16C838.76
heart, embryo E16.CNhs11021.457-17C641.34
heart, embryo E17.CNhs11025.479-18E533.95
heart, embryo E18.CNhs11030.1283-20G335.41
heart, neonate N00.CNhs11213.639-21E338.65
heart, neonate N03.CNhs11221.1349-25I235.05
heart, neonate N10.CNhs11118.749-24G130.04
heart, neonate N16.CNhs11209.782-15G133.48
heart, neonate N20.CNhs11127.821-26I630.56
heart, neonate N25.CNhs11196.1351-25D324.59
heart, neonate N30.CNhs11202.1390-42D223.35
hippocampus, adult.CNhs10478.13-16E817.87
hippocampus, neonate N00.CNhs11228.627-43G131.69
intestinal mucosa, adult.CNhs10506.860-29I320.49
intestine, adult.CNhs10496.178-9A328.30
intestine, embryo E12.CNhs11019.1251-16I547.99
intestine, embryo E13.CNhs11010.381-16D552.49
intestine, embryo E15.CNhs10602.976-16D851.80
intestine, embryo E16.CNhs10585.463-22H433.68
intestine, embryo E17.CNhs10582.482-18D330.24
intestine, embryo E18.CNhs10526.1289-20F717.88
intestine, neonate N00.CNhs11126.644-26D137.96
intestine, neonate N01.CNhs11192.1322-23E933.10
intestine, neonate N06.CNhs11102.688-20B830.16
intestine, neonate N07.CNhs11095.720-20F227.85
intestine, neonate N10.CNhs11098.755-23A531.19
intestine, neonate N20.CNhs11187.827-18D125.17
intestine, neonate N25.CNhs11121.1352-25E320.53
intestine, neonate N30.CNhs11131.1384-42G129.27
kidney, embryo E14.CNhs10606.411-4I947.99
kidney, embryo E15.CNhs10997.434-16F856.55
kidney, embryo E16.CNhs10584.464-22A559.74
kidney, embryo E17.CNhs11028.483-18I245.41
kidney, embryo E18.CNhs11001.1288-20C747.71
kidney, neonate N00.CNhs11214.646-21G745.66
kidney, neonate N10.CNhs11206.758-6D546.73
kidney, neonate N20.CNhs11113.832-19I135.57
kidney, neonate N25.CNhs11122.1353-25F323.39
kidney, neonate N30.CNhs11203.1385-42H132.33
liver, adult pregnant day01.CNhs10466.508-5B220.46
liver, embryo E12.CNhs10601.355-15F846.55
liver, embryo E13.CNhs10524.378-3H633.42
liver, embryo E14.CNhs10594.409-16E137.33
liver, embryo E15.CNhs10520.433-16D734.08
liver, embryo E16.CNhs10523.462-17F524.36
liver, embryo E17.CNhs10510.481-18A315.79
liver, embryo E18.CNhs10579.499-43G437.40
liver, neonate N00.CNhs11117.641-24F437.45
liver, neonate N03.CNhs11123.1345-25G218.94
liver, neonate N06.CNhs11101.684-20A843.13
liver, neonate N07.CNhs11103.716-20H230.52
liver, neonate N10.CNhs11115.751-24B934.95
liver, neonate N20.CNhs11220.823-25A324.25
liver, neonate N25.CNhs11198.1368-26H122.96
liver, neonate N30.CNhs11106.1382-42D135.70
lung, adult.CNhs10474.28-22B123.09
lung, embryo E12.CNhs10522.354-16G245.10
lung, embryo E14.CNhs10604.404-26F853.13
lung, embryo E15.CNhs11020.432-17C541.08
lung, embryo E16.CNhs10998.458-17B644.83
lung, embryo E17.CNhs10605.480-44A645.39
lung, embryo E18.CNhs10583.1287-20I639.04
lung, neonate N00.CNhs11224.640-42C655.81
lung, neonate N06.CNhs11212.683-20E534.36
lung, neonate N07.CNhs11111.715-19A334.33
lung, neonate N10.CNhs11219.750-23E648.63
lung, neonate N20.CNhs11109.822-18A432.94
lung, neonate N25.CNhs11119.1359-25C730.22
lung, neonate N30.CNhs11133.1394-42H234.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A179.92
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A168.53
mammary gland, adult lactating day02.CNhs10480.595-22B629.51
mammary gland, adult pregnant day19.CNhs10476.588-5H227.59
medulla oblongata, adult.CNhs10477.17-12C215.41
medulla oblongata, neonate N30.CNhs11200.1396-42A324.03
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C715.57
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C227.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E165.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E258.57
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E368.07
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D792.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D881.99
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9118.33
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D495.94
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D579.49
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D681.03
olfactory brain, adult.CNhs10489.18-22I918.96
ovary, adult.CNhs10507.91-2I728.39
ovary, embryo E18.CNhs11040.505-44H741.31
ovary, neonate N00.CNhs11217.1299-22I443.33
oviduct, adult pregnant day01.CNhs10500.988-6G631.34
pancreas, adult.CNhs10486.34-16E443.81
pancreas, embryo E14.CNhs11012.405-44F450.26
pancreas, embryo E15.CNhs11042.1556-45F233.26
pancreas, embryo E16.CNhs11003.460-26E540.17
pancreas, embryo E17.CNhs10599.1558-45G345.48
pancreas, embryo E18.CNhs10580.1535-43I735.97
pancreas, neonate N00.CNhs11105.645-26G941.35
pancreas, neonate N01.CNhs11138.1531-43D744.71
pancreas, neonate N02.CNhs11139.1539-43D844.56
pancreas, neonate N16.CNhs11136.787-43B630.97
pancreas, neonate N25.CNhs11094.1555-45E230.57
pancreas, neonate N30.CNhs11182.1548-44H546.41
pituitary gland, adult.CNhs10493.21-1G840.17
pituitary gland, embryo E12.CNhs11018.346-16E655.28
pituitary gland, embryo E13.CNhs11009.370-44C750.45
pituitary gland, embryo E14.CNhs11037.398-44A541.15
pituitary gland, embryo E15.CNhs10592.427-16B948.95
pituitary gland, embryo E16.CNhs11036.449-43F657.97
pituitary gland, embryo E17.CNhs11039.1265-44F533.90
pituitary gland, neonate N00.CNhs11190.1308-22E945.06
placenta, adult pregnant day10.CNhs10472.539-13I730.74
placenta, adult pregnant day17.CNhs10464.577-18G317.79
prostate, adult.CNhs10470.859-1F823.16
skin, adult.CNhs10492.30-1C3107.01
skin, neonate N00.CNhs11124.650-25G440.69
skin, neonate N03.CNhs11215.662-22H356.15
skin, neonate N06.CNhs11097.693-20I556.22
skin, neonate N10.CNhs11108.762-6C457.94
small intestine, neonate N16.CNhs11114.790-21I130.31
spinal cord, adult.CNhs10505.24-13C919.10
spleen, adult.CNhs10465.25-2G233.15
spleen, embryo E16.CNhs11035.461-43C153.04
spleen, embryo E18.CNhs11011.1271-21F240.93
spleen, neonate N10.CNhs11116.752-24D140.31
spleen, neonate N20.CNhs11112.824-19H151.94
spleen, neonate N25.CNhs11099.1354-25G335.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C679.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C977.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D374.21
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E357.41
stomach, embryo E15.CNhs10603.1252-16G847.98
stomach, embryo E16.CNhs11022.459-17D430.78
stomach, embryo E17.CNhs11006.1035-18D533.25
stomach, embryo E18.CNhs10999.1286-20C630.13
stomach, neonate N03.CNhs11193.1340-24B835.33
stomach, neonate N07.CNhs11210.718-18A936.45
stomach, neonate N25.CNhs11104.1355-25E425.13
stomach, neonate N30.CNhs11134.1386-42I127.87
submandibular gland, adult.CNhs10469.59-29C122.37
testis, adult.CNhs10504.57-7G522.55
testis, embryo E13.CNhs11031.389-23F566.39
testis, embryo E15.CNhs11034.443-27C534.08
testis, embryo E16.CNhs11033.470-26G538.31
testis, embryo E17.CNhs11029.486-18I545.85
testis, embryo E18.CNhs11027.503-18G533.96
testis, neonate N00.CNhs11189.1300-22B745.30
testis, neonate N07.CNhs11222.726-26I448.18
testis, neonate N10.CNhs11204.763-44D944.88
testis, neonate N20.CNhs11110.839-18H328.99
testis, neonate N30.CNhs11130.1391-42E237.16
thymus, adult.CNhs10471.38-12B526.86
thymus, embryo E14.CNhs11041.402-44I447.44
thymus, embryo E15.CNhs11005.430-45I248.89
thymus, embryo E16.CNhs11002.456-26C556.00
thymus, embryo E17.CNhs10581.478-18C148.87
thymus, embryo E18.CNhs10595.1273-19G453.84
thymus, neonate N02.CNhs11181.1541-43F858.41
thymus, neonate N03.CNhs11137.2104-43C753.91
thymus, neonate N06.CNhs11197.681-26C469.97
thymus, neonate N07.CNhs11211.713-19D353.73
thymus, neonate N10.CNhs11194.748-24E457.67
thymus, neonate N20.CNhs11186.820-7A264.03
thymus, neonate N25.CNhs11125.1362-25G755.13
thymus, neonate N30.CNhs11132.1393-42G248.27
tongue, adult.CNhs10499.32-1B420.41
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H397.45
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7126.32
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G587.64
urinary bladder, adult.CNhs10481.879-12E433.42
uterus, adult pregnant day19.CNhs10497.590-15F530.40
uterus, adult.CNhs10509.92-27E526.92
vagina, adult.CNhs10502.89-27D533.44
vesicular gland, adult.CNhs10491.51-27F827.08
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A132.19
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.02
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A326.93
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D730.07
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A529.46
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A724.32
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A824.92
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A928.99
whole body, embryo E11.CNhs11014.324-5I885.11
whole body, embryo E12.CNhs10587.857-27C975.81
whole body, embryo E13.CNhs10512.372-23H236.54
whole body, embryo E14.5.CNhs10578.420-27D237.68
whole body, embryo E14.CNhs10519.395-14B133.54
whole body, embryo E16.CNhs10514.453-14F237.50
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G535.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G541.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.37
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G526.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G529.15
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G542.06
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G554.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G549.88
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G552.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G564.78
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G547.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G554.01
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G535.03
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G546.51
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G530.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G536.38
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G542.92
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G534.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G549.03
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G537.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G538.96
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G544.20
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G548.89
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G542.09
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G543.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G542.95
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G555.25
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G550.97
whole body, embryo E17.5.CNhs10513.490-9F932.99
whole body, embryo E17.CNhs10517.475-3I527.23
whole body, embryo E18.CNhs10516.493-3B321.76
whole body, neonate N00.CNhs10525.657-19C230.30
whole body, neonate N01.CNhs10576.659-23C637.49
whole body, neonate N06.CNhs10515.692-21D125.15
whole body, neonate N10.CNhs10518.761-6B419.25





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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