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FFCP PHASE1:Mm9::chr6:88034495..88034521,+: Difference between revisions

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{{FFCP|EntrezGene=103963|HGNC=|MCL_coexpression_id=1689|UniProt=Q91YQ5,Q5RKP4,Q8BMR3|association_with_transcript=28bp_to_ENSMUST00000032143,NM_133933,uc009cva.2_5end|description=CAGE_peak_1_at_Rpn1_5end|id=chr6:88034495..88034521,+|ontology_enrichment_celltype=CL:0000066!1.97e-10!25;CL:0000223!3.70e-09!20;CL:0002076!5.19e-07!15|ontology_enrichment_celltype_v019_2=CL:0000066,1.97e-10,25;CL:0000223,3.70e-09,20;CL:0002076,5.19e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.50e-17!43;UBERON:0005409!1.16e-14!59;UBERON:0004119!7.04e-12!130;UBERON:0000925!7.04e-12!130;UBERON:0006595!7.04e-12!130;UBERON:0001007!5.03e-11!128;UBERON:0001555!5.03e-11!128;UBERON:0007026!5.03e-11!128;UBERON:0004921!2.57e-10!126;UBERON:0004185!2.57e-10!126;UBERON:0002108!9.32e-10!16;UBERON:0000344!1.36e-08!15;UBERON:0001045!2.93e-08!13;UBERON:0001264!7.45e-08!12;UBERON:0003922!7.45e-08!12;UBERON:0002114!7.45e-08!12;UBERON:0003923!7.45e-08!12;UBERON:0003924!7.45e-08!12;UBERON:0003921!7.45e-08!12;UBERON:0001242!8.37e-08!13;UBERON:0000060!8.37e-08!13;UBERON:0001262!8.37e-08!13;UBERON:0004786!8.37e-08!13;UBERON:0000466!9.25e-08!79;UBERON:0002100!3.83e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.75e-10,31;UBERON:0005409,1.01e-08,47;UBERON:0000344,1.36e-08,15;UBERON:0001264,7.45e-08,12;UBERON:0001242,8.37e-08,13;UBERON:0001262,8.37e-08,13;UBERON:0004786,8.37e-08,13;UBERON:0004119,3.58e-07,118;UBERON:0000925,3.58e-07,118;UBERON:0006595,3.58e-07,118;UBERON:0002100,3.81e-07,90|phase1_expression=187.854597653923,274.294670404538,262.989560367152,394.1108673328,375.170901729814,343.984628147462,421.437203634328,96.3259992874159,170.917508692123,201.061428110592,177.8954689863,248.729591747459,79.2659379581483,87.2455616141594,145.90207567526,125.332190514302,83.2478634972495,102.682934824106,101.876024169064,117.980323199852,168.470757789269,116.964740514643,191.198245649701,254.06796739593,274.144090875268,230.841249574238,252.857291745377,254.040583336663,365.605059034063,360.655115686461,468.738299525314,177.808588568697,119.937633578991,190.178017218526,298.672574822818,319.835457669739,344.229534658354,168.249715556237,179.707129240474,181.139215414934,139.999094151381,130.461687627063,166.530051089686,165.806109273835,149.024088892686,155.280552328783,212.028054318319,195.1325149605,229.791747140258,212.90073948634,207.039917583911,271.692346649796,82.0456943622331,54.4021606508508,59.1525086490737,253.91506336748,189.398603799518,144.903857929961,174.396789260973,217.415292480806,159.091682280051,252.100331859434,310.363883842788,291.117558540533,322.370434196834,284.902526093386,224.700082888804,193.261807576742,88.8619977483654,97.8793052904757,100.955981448663,173.390147533109,172.719199024162,103.504725336636,92.9701068876893,115.821567112863,167.376139119071,135.603953046469,156.678663921368,166.044836252314,144.458989248205,148.981223979233,160.251041426793,190.213762190708,149.895081069051,187.9730375322,171.130760320522,155.643537264126,140.017731473057,178.651168092441,235.659829314464,286.521151034802,245.469651468498,323.282211791052,373.62144003241,260.751648290649,165.443526915204,164.294830965248,161.586894862984,178.789824702232,239.574657040134,162.974626316184,252.257187309579,241.762679072133,224.501209528629,211.555487671707,218.892084691401,193.199124484649,117.298861292169,221.920997901913,191.007344769516,174.763184551169,186.567937280151,156.600823534175,115.001755578719,179.577559010106,229.396930057499,84.7352231550682,178.691331493875,169.531658744885,127.425556151647,150.796203725054,264.676300929733,85.1992119303602,100.324972563645,246.771515331499,190.146602590895,233.362162356436,235.588200993462,128.969740527552,119.86515793848,106.429236239596,132.10648334613,139.876355159691,129.036375671487,135.146972135442,152.657206411624,181.260956178906,318.43067562643,161.619345320812,154.713206682655,145.987836315255,148.551257089413,133.072354148936,101.238310737176,130.035426089123,117.783067771579,132.714829189115,154.131114946982,147.880954691235,168.385225824899,184.34361097159,180.730711996639,157.061727101497,171.622301764225,169.378161062538,321.613639789462,324.258362964541,319.115609821251,116.611809937488,118.201134230472,130.905118682158,120.739815148457,118.845595975432,114.466197762435,102.54746963493,99.7977053206583,78.9333714402066,109.267740342551,110.977205717468,93.1480621681882,92.9831920025114,117.898411911294,84.6842502377946,119.865270681553,120.912919545659,170.165673236656,372.34639786227,160.606052653031,156.527516833936,178.481433931099,187.565677899709,223.489934064095,256.994820878067,259.092867603303,235.190107345888,201.570837457816,182.045171917653,211.730998611364,241.782420927986,243.155306109031,217.462270393769,192.892255269284,171.601265939813,134.122205450966,193.061458797358,183.673005347742,150.651741124404,173.584294406086,176.541736983604,212.41927876938,190.648618259182,201.884239046348,164.509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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=103963
|HGNC=
|MCL_coexpression_id=1689
|TSSclassifier=NA
|UniProt=Q91YQ5,Q5RKP4,Q8BMR3
|association_with_transcript=28bp_to_ENSMUST00000032143,NM_133933,uc009cva.2_5end
|cluster_id=chr6:88034495..88034521,+
|description=CAGE_peak_1_at_Rpn1_5end
|id=chr6:88034495..88034521,+
|ontology_enrichment_celltype=CL:0000066!1.97e-10!25;CL:0000223!3.70e-09!20;CL:0002076!5.19e-07!15
|ontology_enrichment_celltype_v019_2=CL:0000066,1.97e-10,25;CL:0000223,3.70e-09,20;CL:0002076,5.19e-07,15
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!4.50e-17!43;UBERON:0005409!1.16e-14!59;UBERON:0004119!7.04e-12!130;UBERON:0000925!7.04e-12!130;UBERON:0006595!7.04e-12!130;UBERON:0001007!5.03e-11!128;UBERON:0001555!5.03e-11!128;UBERON:0007026!5.03e-11!128;UBERON:0004921!2.57e-10!126;UBERON:0004185!2.57e-10!126;UBERON:0002108!9.32e-10!16;UBERON:0000344!1.36e-08!15;UBERON:0001045!2.93e-08!13;UBERON:0001264!7.45e-08!12;UBERON:0003922!7.45e-08!12;UBERON:0002114!7.45e-08!12;UBERON:0003923!7.45e-08!12;UBERON:0003924!7.45e-08!12;UBERON:0003921!7.45e-08!12;UBERON:0001242!8.37e-08!13;UBERON:0000060!8.37e-08!13;UBERON:0001262!8.37e-08!13;UBERON:0004786!8.37e-08!13;UBERON:0000466!9.25e-08!79;UBERON:0002100!3.83e-07!98
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.75e-10,31;UBERON:0005409,1.01e-08,47;UBERON:0000344,1.36e-08,15;UBERON:0001264,7.45e-08,12;UBERON:0001242,8.37e-08,13;UBERON:0001262,8.37e-08,13;UBERON:0004786,8.37e-08,13;UBERON:0004119,3.58e-07,118;UBERON:0000925,3.58e-07,118;UBERON:0006595,3.58e-07,118;UBERON:0002100,3.81e-07,90
|phase1_expression=187.854597653923,274.294670404538,262.989560367152,394.1108673328,375.170901729814,343.984628147462,421.437203634328,96.3259992874159,170.917508692123,201.061428110592,177.8954689863,248.729591747459,79.2659379581483,87.2455616141594,145.90207567526,125.332190514302,83.2478634972495,102.682934824106,101.876024169064,117.980323199852,168.470757789269,116.964740514643,191.198245649701,254.06796739593,274.144090875268,230.841249574238,252.857291745377,254.040583336663,365.605059034063,360.655115686461,468.738299525314,177.808588568697,119.937633578991,190.178017218526,298.672574822818,319.835457669739,344.229534658354,168.249715556237,179.707129240474,181.139215414934,139.999094151381,130.461687627063,166.530051089686,165.806109273835,149.024088892686,155.280552328783,212.028054318319,195.1325149605,229.791747140258,212.90073948634,207.039917583911,271.692346649796,82.0456943622331,54.4021606508508,59.1525086490737,253.91506336748,189.398603799518,144.903857929961,174.396789260973,217.415292480806,159.091682280051,252.100331859434,310.363883842788,291.117558540533,322.370434196834,284.902526093386,224.700082888804,193.261807576742,88.8619977483654,97.8793052904757,100.955981448663,173.390147533109,172.719199024162,103.504725336636,92.9701068876893,115.821567112863,167.376139119071,135.603953046469,156.678663921368,166.044836252314,144.458989248205,148.981223979233,160.251041426793,190.213762190708,149.895081069051,187.9730375322,171.130760320522,155.643537264126,140.017731473057,178.651168092441,235.659829314464,286.521151034802,245.469651468498,323.282211791052,373.62144003241,260.751648290649,165.443526915204,164.294830965248,161.586894862984,178.789824702232,239.574657040134,162.974626316184,252.257187309579,241.762679072133,224.501209528629,211.555487671707,218.892084691401,193.199124484649,117.298861292169,221.920997901913,191.007344769516,174.763184551169,186.567937280151,156.600823534175,115.001755578719,179.577559010106,229.396930057499,84.7352231550682,178.691331493875,169.531658744885,127.425556151647,150.796203725054,264.676300929733,85.1992119303602,100.324972563645,246.771515331499,190.146602590895,233.362162356436,235.588200993462,128.969740527552,119.86515793848,106.429236239596,132.10648334613,139.876355159691,129.036375671487,135.146972135442,152.657206411624,181.260956178906,318.43067562643,161.619345320812,154.713206682655,145.987836315255,148.551257089413,133.072354148936,101.238310737176,130.035426089123,117.783067771579,132.714829189115,154.131114946982,147.880954691235,168.385225824899,184.34361097159,180.730711996639,157.061727101497,171.622301764225,169.378161062538,321.613639789462,324.258362964541,319.115609821251,116.611809937488,118.201134230472,130.905118682158,120.739815148457,118.845595975432,114.466197762435,102.54746963493,99.7977053206583,78.9333714402066,109.267740342551,110.977205717468,93.1480621681882,92.9831920025114,117.898411911294,84.6842502377946,119.865270681553,120.912919545659,170.165673236656,372.34639786227,160.606052653031,156.527516833936,178.481433931099,187.565677899709,223.489934064095,256.994820878067,259.092867603303,235.190107345888,201.570837457816,182.045171917653,211.730998611364,241.782420927986,243.155306109031,217.462270393769,192.892255269284,171.601265939813,134.122205450966,193.061458797358,183.673005347742,150.651741124404,173.584294406086,176.541736983604,212.41927876938,190.648618259182,201.884239046348,164.509274236069,165.306114890204,156.279168107473,185.61701107048,185.947590169113,225.853130530119,215.484406950657,133.437291635854,222.669306095534,145.205888592628,171.55697687518,217.178220487734,274.300661450563,251.335776344199,187.188086288986,173.852751946775,205.219198947435,184.313388355931,206.240279216854,195.731667072611,145.562937716938,148.301188271987,120.397460728262,163.625279582226,155.46821213344,151.482030224613,175.497610060555,191.507644889278,157.233526678103,199.044494799839,278.479710115179,321.61383455445,254.137743346659,116.880829511113,119.555920324047,179.344830242083,88.1123535943262,155.545552172215,151.099794042799,143.041136094578,133.822526853429,142.591151412732,122.572137831564,150.589581023061,156.941395698374,135.188420057711,102.822821254978,203.400142103449,198.899279296324,129.169358767386,170.414137030629,363.721679051498,243.751758699601,295.974762268491,597.123682507173,691.59703312677,443.628918483087,196.14707451468,299.915326818942,314.074190356939,528.097422510749,625.132348849743,492.987896726333,238.988603239159,173.939016834246,176.186527312112,162.467472553947,172.37470710029,178.012079966866,180.345726579925,226.826387090376,262.362969615228,427.900783144917,534.119780089118,120.861623406105,95.9098694573679,120.203659381815,117.701131187093,120.807702212365,205.785470660675,116.076239058579,141.822831062218,158.092340859828,152.970679607382,121.68602322503,102.383976563048,114.617864776468,105.896561886172,97.406210817266,93.8377822132038,216.710230289431,136.815317223841,182.987520414164,221.950975388802,221.842682071351,248.49659754315,239.384214833057,205.063223654558,260.185406332125,202.328973308489,291.408137837768,296.502485747884,146.675731669143,179.02608667458,212.924051236732,230.291965260795,194.130588188904,131.55746452189,129.032545380355,141.56011497471,287.001935541295,305.311806633337,86.2710359314927,188.939900650433,163.20771093491,115.369690804282,104.909643661144,91.3934231993819,91.2283461856563,92.7490230656345,84.4079521566514,84.5133485803948,77.4345101850935,95.3138073634779,78.7012864617895,84.5020002772743,98.6277168726169,214.660416912721,187.591674170414,268.111732333433,145.278574712207,308.174624690841,254.580757731498,181.998753838127,379.188510650735,150.22399013614,136.256270006124,155.254684142076,139.888490427762,136.331421434358,128.416962556249,160.65535505517,141.851179015629,139.567861967135,147.043928537517,47.3270304983846,126.091859994726,159.294454168607,146.350243675113,76.0895780339576,71.8828118039555,142.237905793034,150.405591784393,147.943755621827,163.495096011177,141.694928638644,153.919094571038,141.117751757113,137.462002213254,136.064625955848,138.125170472091,141.378877652724,133.493180560884,154.120126900437,153.675672620311,158.062725349676,158.13094328797,144.969203487971,178.776092457764,160.550602988554,161.106213425752,155.854632887602,157.052617728392,147.34746352276,156.558693792509,153.632348470806,148.150741492847,175.150886476627,152.302914885805,162.041553224159,161.127822769975,142.464349543254,113.66678759155,96.9831843589036,129.928345861395,137.033890851669
|short_description=p1@Rpn1
}}

Latest revision as of 21:19, 1 October 2015

Short description:p1@Rpn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rpn1_5end
Coexpression cluster:MCL_coexpression_mm9:1689
Association with transcript: 28bp_to_ENSMUST00000032143, NM_133933, uc009cva.2_5end
EntrezGene:Rpn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rpn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7187.85
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5274.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6262.99
CD326+ enterocyte, pool1.CNhs13542.11848-124I3394.11
CD326+ enterocyte, pool2.CNhs13197.11849-124I4375.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7343.98
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8421.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E996.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7170.92
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2201.06
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6177.90
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1248.73
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E479.27
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E887.25
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1145.90
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3125.33
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A583.25
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2102.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4101.88
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6117.98
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3168.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2116.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9191.20
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1254.07
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2274.14
GP2+ M cell, pool1.CNhs13228.11845-124H9230.84
GP2+ M cell, pool2.CNhs13231.11846-124I1252.86
GP2+ M cell, pool3.CNhs13240.11847-124I2254.04
Ileum epithelium, pool1.CNhs13199.10252-104B9365.61
Ileum epithelium, pool2.CNhs13232.10253-104C1360.66
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8468.74
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3177.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6119.94
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9190.18
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5298.67
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6319.84
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7344.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8168.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1179.71
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3181.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9140.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2130.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4166.53
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8165.81
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9149.02
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3155.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7212.03
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2195.13
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8229.79
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3212.90
Mouse Astrocytes, donor2.CNhs12078.11552-120C4207.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C4271.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A282.05
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I954.40
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A159.15
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1253.92
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1189.40
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5144.90
Mouse Granule cells, donor1.CNhs12131.11713-123C3174.40
Mouse Granule cells, donor2.CNhs12357.11731-123E3217.42
Mouse Granule cells, donor3.CNhs12108.11636-122C7159.09
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6252.10
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1310.36
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7291.12
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7322.37
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2284.90
Mouse Microglia, donor1.CNhs12629.11718-123C8224.70
Mouse Microglia, donor2.CNhs12634.11736-123E8193.26
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D588.86
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F597.88
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9100.96
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1173.39
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5172.72
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2103.50
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F292.97
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6115.82
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3167.38
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3135.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7156.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4166.04
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4144.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8148.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4160.25
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5190.21
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6149.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6187.97
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6171.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1155.64
Mouse Schwann, donor1.CNhs12507.11728-123D9140.02
Mouse Schwann, donor2.CNhs12573.11746-123F9178.65
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3235.66
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7286.52
Mouse hepatocyte, donor1.CNhs13078.11714-123C4245.47
Mouse hepatocyte, donor3.CNhs12615.11637-122C8323.28
Mouse hepatocyte, donor6.CNhs13090.11822-124F4373.62
Mouse hepatocyte, donor8.CNhs13091.11824-124F6260.75
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7165.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7164.29
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3161.59
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8178.79
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6239.57
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1162.97
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8252.26
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6241.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1224.50
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2211.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3218.89
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6193.20
accessory axillary lymph node, adult.CNhs10475.1063-29H9117.30
adrenal gland, adult.CNhs10508.49-24D7221.92
adrenal gland, embryo E14.CNhs11038.406-44C5191.01
adrenal gland, embryo E16.CNhs11004.1254-43D6174.76
adrenal gland, embryo E17.CNhs11043.1263-45I1186.57
adrenal gland, embryo E18.CNhs11026.1262-18F5156.60
adrenal gland, neonate N00.CNhs11191.1311-23C1115.00
adrenal gland, neonate N25.CNhs11223.1377-27I3179.58
amnion, adult pregnant day17.5.CNhs10488.583-22A8229.40
aorta, adult.CNhs10498.46-23H184.74
bone (os femoris), adult.CNhs10483.56-12G2178.69
bone (os femoris), neonate N02.CNhs11227.1985-43F5169.53
bone (os femoris), neonate N16.CNhs11225.1525-43A6127.43
bone (os femoris), neonate N20.CNhs11195.1350-25C3150.80
cecum, adult.CNhs10467.37-13H4264.68
cerebellum, adult.CNhs10494.15-8B285.20
cerebellum, neonate N30.CNhs11135.1395-42I2100.32
colon, adult.CNhs10468.36-18H7246.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7190.15
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1233.36
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4235.59
corpora quadrigemina, adult.CNhs10501.16-22A4128.97
corpus striatum, adult.CNhs10487.19-21D8119.87
corpus striatum, neonate N00.CNhs11226.630-43F1106.43
cortex, adult.CNhs10473.12-14D5132.11
cortex, neonate N30.CNhs11107.1392-42F2139.88
diencephalon, adult.CNhs10482.20-12F2129.04
diencephalon, neonate N30.CNhs11201.1388-42B2135.15
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1152.66
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2181.26
epididymis, adult.CNhs10490.58-23B2318.43
eyeball, adult.CNhs10484.31-12G4161.62
eyeball, embryo E12.CNhs11016.345-16C6154.71
eyeball, embryo E14.CNhs10521.399-16E2145.99
eyeball, embryo E15.CNhs10593.426-16C9148.55
eyeball, embryo E17.CNhs11023.1261-18D4133.07
eyeball, neonate N00.CNhs11207.633-15C6101.24
eyeball, neonate N01.CNhs11140.1532-43E7130.04
eyeball, neonate N02.CNhs11205.1551-44G8117.78
eyeball, neonate N16.CNhs11188.777-19A2132.71
forelimb, embryo E11.CNhs10596.335-25E2154.13
forelimb, embryo E12.CNhs10600.359-14H2147.88
forelimb, embryo E13.CNhs10589.384-1E2168.39
forelimb, embryo E14.CNhs10577.413-26A8184.34
forelimb, embryo E15.CNhs11007.437-20E7180.73
forelimb, embryo E17.CNhs10598.1517-43C4157.06
forelimb, embryo E18.CNhs11008.1520-43B5171.62
gonad, embryo E13.CNhs11044.1564-45I6169.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8321.61
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2324.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5319.12
heart, embryo E11.CNhs10586.331-24E9116.61
heart, embryo E12.CNhs11015.353-12F5118.20
heart, embryo E13.CNhs11013.376-3I9130.91
heart, embryo E14.CNhs10597.403-26D4120.74
heart, embryo E15.CNhs11017.431-16C8118.85
heart, embryo E16.CNhs11021.457-17C6114.47
heart, embryo E17.CNhs11025.479-18E5102.55
heart, embryo E18.CNhs11030.1283-20G399.80
heart, neonate N00.CNhs11213.639-21E378.93
heart, neonate N03.CNhs11221.1349-25I2109.27
heart, neonate N10.CNhs11118.749-24G1110.98
heart, neonate N16.CNhs11209.782-15G193.15
heart, neonate N20.CNhs11127.821-26I692.98
heart, neonate N25.CNhs11196.1351-25D3117.90
heart, neonate N30.CNhs11202.1390-42D284.68
hippocampus, adult.CNhs10478.13-16E8119.87
hippocampus, neonate N00.CNhs11228.627-43G1120.91
intestinal mucosa, adult.CNhs10506.860-29I3170.17
intestine, adult.CNhs10496.178-9A3372.35
intestine, embryo E12.CNhs11019.1251-16I5160.61
intestine, embryo E13.CNhs11010.381-16D5156.53
intestine, embryo E15.CNhs10602.976-16D8178.48
intestine, embryo E16.CNhs10585.463-22H4187.57
intestine, embryo E17.CNhs10582.482-18D3223.49
intestine, embryo E18.CNhs10526.1289-20F7256.99
intestine, neonate N00.CNhs11126.644-26D1259.09
intestine, neonate N01.CNhs11192.1322-23E9235.19
intestine, neonate N06.CNhs11102.688-20B8201.57
intestine, neonate N07.CNhs11095.720-20F2182.05
intestine, neonate N10.CNhs11098.755-23A5211.73
intestine, neonate N20.CNhs11187.827-18D1241.78
intestine, neonate N25.CNhs11121.1352-25E3243.16
intestine, neonate N30.CNhs11131.1384-42G1217.46
kidney, embryo E14.CNhs10606.411-4I9192.89
kidney, embryo E15.CNhs10997.434-16F8171.60
kidney, embryo E16.CNhs10584.464-22A5134.12
kidney, embryo E17.CNhs11028.483-18I2193.06
kidney, embryo E18.CNhs11001.1288-20C7183.67
kidney, neonate N00.CNhs11214.646-21G7150.65
kidney, neonate N10.CNhs11206.758-6D5173.58
kidney, neonate N20.CNhs11113.832-19I1176.54
kidney, neonate N25.CNhs11122.1353-25F3212.42
kidney, neonate N30.CNhs11203.1385-42H1190.65
liver, adult pregnant day01.CNhs10466.508-5B2201.88
liver, embryo E12.CNhs10601.355-15F8164.51
liver, embryo E13.CNhs10524.378-3H6165.31
liver, embryo E14.CNhs10594.409-16E1156.28
liver, embryo E15.CNhs10520.433-16D7185.62
liver, embryo E16.CNhs10523.462-17F5185.95
liver, embryo E17.CNhs10510.481-18A3225.85
liver, embryo E18.CNhs10579.499-43G4215.48
liver, neonate N00.CNhs11117.641-24F4133.44
liver, neonate N03.CNhs11123.1345-25G2222.67
liver, neonate N06.CNhs11101.684-20A8145.21
liver, neonate N07.CNhs11103.716-20H2171.56
liver, neonate N10.CNhs11115.751-24B9217.18
liver, neonate N20.CNhs11220.823-25A3274.30
liver, neonate N25.CNhs11198.1368-26H1251.34
liver, neonate N30.CNhs11106.1382-42D1187.19
lung, adult.CNhs10474.28-22B1173.85
lung, embryo E12.CNhs10522.354-16G2205.22
lung, embryo E14.CNhs10604.404-26F8184.31
lung, embryo E15.CNhs11020.432-17C5206.24
lung, embryo E16.CNhs10998.458-17B6195.73
lung, embryo E17.CNhs10605.480-44A6145.56
lung, embryo E18.CNhs10583.1287-20I6148.30
lung, neonate N00.CNhs11224.640-42C6120.40
lung, neonate N06.CNhs11212.683-20E5163.63
lung, neonate N07.CNhs11111.715-19A3155.47
lung, neonate N10.CNhs11219.750-23E6151.48
lung, neonate N20.CNhs11109.822-18A4175.50
lung, neonate N25.CNhs11119.1359-25C7191.51
lung, neonate N30.CNhs11133.1394-42H2157.23
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1199.04
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1278.48
mammary gland, adult lactating day02.CNhs10480.595-22B6321.61
mammary gland, adult pregnant day19.CNhs10476.588-5H2254.14
medulla oblongata, adult.CNhs10477.17-12C2116.88
medulla oblongata, neonate N30.CNhs11200.1396-42A3119.56
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7179.34
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C288.11
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1155.55
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2151.10
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3143.04
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7133.82
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8142.59
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9122.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4150.59
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5156.94
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6135.19
olfactory brain, adult.CNhs10489.18-22I9102.82
ovary, adult.CNhs10507.91-2I7203.40
ovary, embryo E18.CNhs11040.505-44H7198.90
ovary, neonate N00.CNhs11217.1299-22I4129.17
oviduct, adult pregnant day01.CNhs10500.988-6G6170.41
pancreas, adult.CNhs10486.34-16E4363.72
pancreas, embryo E14.CNhs11012.405-44F4243.75
pancreas, embryo E15.CNhs11042.1556-45F2295.97
pancreas, embryo E16.CNhs11003.460-26E5597.12
pancreas, embryo E17.CNhs10599.1558-45G3691.60
pancreas, embryo E18.CNhs10580.1535-43I7443.63
pancreas, neonate N00.CNhs11105.645-26G9196.15
pancreas, neonate N01.CNhs11138.1531-43D7299.92
pancreas, neonate N02.CNhs11139.1539-43D8314.07
pancreas, neonate N16.CNhs11136.787-43B6528.10
pancreas, neonate N25.CNhs11094.1555-45E2625.13
pancreas, neonate N30.CNhs11182.1548-44H5492.99
pituitary gland, adult.CNhs10493.21-1G8238.99
pituitary gland, embryo E12.CNhs11018.346-16E6173.94
pituitary gland, embryo E13.CNhs11009.370-44C7176.19
pituitary gland, embryo E14.CNhs11037.398-44A5162.47
pituitary gland, embryo E15.CNhs10592.427-16B9172.37
pituitary gland, embryo E16.CNhs11036.449-43F6178.01
pituitary gland, embryo E17.CNhs11039.1265-44F5180.35
pituitary gland, neonate N00.CNhs11190.1308-22E9226.83
placenta, adult pregnant day10.CNhs10472.539-13I7262.36
placenta, adult pregnant day17.CNhs10464.577-18G3427.90
prostate, adult.CNhs10470.859-1F8534.12
skin, adult.CNhs10492.30-1C3120.86
skin, neonate N00.CNhs11124.650-25G495.91
skin, neonate N03.CNhs11215.662-22H3120.20
skin, neonate N06.CNhs11097.693-20I5117.70
skin, neonate N10.CNhs11108.762-6C4120.81
small intestine, neonate N16.CNhs11114.790-21I1205.79
spinal cord, adult.CNhs10505.24-13C9116.08
spleen, adult.CNhs10465.25-2G2141.82
spleen, embryo E16.CNhs11035.461-43C1158.09
spleen, embryo E18.CNhs11011.1271-21F2152.97
spleen, neonate N10.CNhs11116.752-24D1121.69
spleen, neonate N20.CNhs11112.824-19H1102.38
spleen, neonate N25.CNhs11099.1354-25G3114.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6105.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C997.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D393.84
stomach, adult.CNhs10503.33-1H6216.71
stomach, embryo E12.CNhs10588.356-43E3136.82
stomach, embryo E15.CNhs10603.1252-16G8182.99
stomach, embryo E16.CNhs11022.459-17D4221.95
stomach, embryo E17.CNhs11006.1035-18D5221.84
stomach, embryo E18.CNhs10999.1286-20C6248.50
stomach, neonate N03.CNhs11193.1340-24B8239.38
stomach, neonate N07.CNhs11210.718-18A9205.06
stomach, neonate N25.CNhs11104.1355-25E4260.19
stomach, neonate N30.CNhs11134.1386-42I1202.33
submandibular gland, adult.CNhs10469.59-29C1291.41
testis, adult.CNhs10504.57-7G5296.50
testis, embryo E13.CNhs11031.389-23F5146.68
testis, embryo E15.CNhs11034.443-27C5179.03
testis, embryo E16.CNhs11033.470-26G5212.92
testis, embryo E17.CNhs11029.486-18I5230.29
testis, embryo E18.CNhs11027.503-18G5194.13
testis, neonate N00.CNhs11189.1300-22B7131.56
testis, neonate N07.CNhs11222.726-26I4129.03
testis, neonate N10.CNhs11204.763-44D9141.56
testis, neonate N20.CNhs11110.839-18H3287.00
testis, neonate N30.CNhs11130.1391-42E2305.31
thymus, adult.CNhs10471.38-12B586.27
thymus, embryo E14.CNhs11041.402-44I4188.94
thymus, embryo E15.CNhs11005.430-45I2163.21
thymus, embryo E16.CNhs11002.456-26C5115.37
thymus, embryo E17.CNhs10581.478-18C1104.91
thymus, embryo E18.CNhs10595.1273-19G491.39
thymus, neonate N02.CNhs11181.1541-43F891.23
thymus, neonate N03.CNhs11137.2104-43C792.75
thymus, neonate N06.CNhs11197.681-26C484.41
thymus, neonate N07.CNhs11211.713-19D384.51
thymus, neonate N10.CNhs11194.748-24E477.43
thymus, neonate N20.CNhs11186.820-7A295.31
thymus, neonate N25.CNhs11125.1362-25G778.70
thymus, neonate N30.CNhs11132.1393-42G284.50
tongue, adult.CNhs10499.32-1B498.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3214.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7187.59
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5268.11
urinary bladder, adult.CNhs10481.879-12E4145.28
uterus, adult pregnant day19.CNhs10497.590-15F5308.17
uterus, adult.CNhs10509.92-27E5254.58
vagina, adult.CNhs10502.89-27D5182.00
vesicular gland, adult.CNhs10491.51-27F8379.19
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1150.22
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2136.26
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3155.25
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7139.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4136.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5128.42
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6160.66
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7141.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8139.57
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9147.04
whole body, embryo E11.CNhs11014.324-5I847.33
whole body, embryo E12.CNhs10587.857-27C9126.09
whole body, embryo E13.CNhs10512.372-23H2159.29
whole body, embryo E14.5.CNhs10578.420-27D2146.35
whole body, embryo E14.CNhs10519.395-14B176.09
whole body, embryo E16.CNhs10514.453-14F271.88
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5142.24
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5150.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5147.94
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5163.50
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5141.69
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5153.92
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5141.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5137.46
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5136.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5138.13
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5141.38
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5133.49
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5154.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5153.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5158.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5158.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5144.97
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5178.78
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5160.55
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5161.11
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5155.85
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5157.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5147.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5156.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5153.63
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5148.15
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5175.15
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5152.30
whole body, embryo E17.5.CNhs10513.490-9F9162.04
whole body, embryo E17.CNhs10517.475-3I5161.13
whole body, embryo E18.CNhs10516.493-3B3142.46
whole body, neonate N00.CNhs10525.657-19C2113.67
whole body, neonate N01.CNhs10576.659-23C696.98
whole body, neonate N06.CNhs10515.692-21D1129.93
whole body, neonate N10.CNhs10518.761-6B4137.03





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell1.97e-1025
endodermal cell3.70e-0920
endo-epithelial cell5.19e-0715

Uber anatomy
Ontology termp-valuen
intestine1.75e-1031
gastrointestinal system1.01e-0847
mucosa1.36e-0815
pancreas7.45e-0812
intestinal mucosa8.37e-0813
wall of intestine8.37e-0813
gastrointestinal system mucosa8.37e-0813
endoderm-derived structure3.58e-07118
endoderm3.58e-07118
presumptive endoderm3.58e-07118
trunk3.81e-0790
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