FFCP PHASE1:Mm9::chr7:105310967..105310981,-: Difference between revisions
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{{FFCP|EntrezGene=12337|HGNC=|MCL_coexpression_id=566|UniProt=O08688|association_with_transcript=-115bp_to_ENSMUST00000107112_5end|description=CAGE_peak_7_at_Capn5_5end|id=chr7:105310967..105310981,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,1.66e-13,3;CL:0002202,1.66e-13,3;CL:0000069,1.66e-13,3;CL:0002632,1.66e-13,3;CL:0002368,1.66e-13,3;CL:0000307,1.66e-13,3;CL:0000377,1.66e-13,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000161!5.42e-08!5;UBERON:0003100!1.13e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.66e-13,3;UBERON:0001005,1.66e-13,3;UBERON:0007196,1.66e-13,3;UBERON:0001558,1.66e-13,3;UBERON:0007023,2.98e-09,51;UBERON:0000161,8.33e-09,5;UBERON:0004122,8.85e-09,5;UBERON:0004175,1.28e-08,9;UBERON:0000162,3.97e-07,3;UBERON:0001353,3.97e-07,3;UBERON:0000163,3.97e-07,3;UBERON:0006866,3.97e-07,3;UBERON:0001046,3.97e-07,3;UBERON:0000164,3.97e-07,3;UBERON:0000931,3.97e-07,3;UBERON:0001301,4.26e-07,3;UBERON:0006555,4.26e-07,3;UBERON:0005103,4.26e-07,3;UBERON:0000083,4.26e-07,3;UBERON:0009201,4.26e-07,3;UBERON:0004819,4.26e-07,3;UBERON:0006553,4.26e-07,3;UBERON:0003074,4.26e-07,3;UBERON:0003060,4.26e-07,3;UBERON:0004871,8.40e-07,3;UBERON:0000945,9.33e-07,16;UBERON:0010039,9.33e-07,16|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0.297872853602656,0,0.159992422793407,0,0,0,0,0,0,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,1.29894624606728,2.28023878927589,1.01104889002957,0,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0,0,0,3.72783522436244,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,1.7416975885413,15.4160882644542,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0.190225626112559,0,0,0.502670417600539,0.397912944082302,0,0,0.216138049874694,0.796565093017469,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0.157635144106191,0,0.318909537314974,0,0,0,0,0,2.45882136509518,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0,2.42581237860458,0,0,0,0,0.328281799490123,0.582961673259701,0,0,0,0,0,0,0,0,0,0,4.77335309007557,0,0,0,0.418176592028937,0.655087691238533,1.21377911746339,1.07449492442937,2.87931536182433,1.16653475962614,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0.0897138566094757,0,5.21611903886914,6.38120416534019,7.50921659495787,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0,0.0574354689556133,0.476293691283074,0,0,0.412085900803307,0,0,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0,0.263069711437843,0,0,0.237270036248348,0,0,0.309873682371932,0,0,0,0,0,0,0|short_description=p7@Capn5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12337 | |||
|HGNC= | |||
|MCL_coexpression_id=566 | |||
|TSSclassifier=NA | |||
|UniProt=O08688 | |||
|association_with_transcript=-115bp_to_ENSMUST00000107112_5end | |||
|cluster_id=chr7:105310967..105310981,- | |||
|description=CAGE_peak_7_at_Capn5_5end | |||
|id=chr7:105310967..105310981,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.66e-13,3;CL:0002202,1.66e-13,3;CL:0000069,1.66e-13,3;CL:0002632,1.66e-13,3;CL:0002368,1.66e-13,3;CL:0000307,1.66e-13,3;CL:0000377,1.66e-13,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000161!5.42e-08!5;UBERON:0003100!1.13e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.66e-13,3;UBERON:0001005,1.66e-13,3;UBERON:0007196,1.66e-13,3;UBERON:0001558,1.66e-13,3;UBERON:0007023,2.98e-09,51;UBERON:0000161,8.33e-09,5;UBERON:0004122,8.85e-09,5;UBERON:0004175,1.28e-08,9;UBERON:0000162,3.97e-07,3;UBERON:0001353,3.97e-07,3;UBERON:0000163,3.97e-07,3;UBERON:0006866,3.97e-07,3;UBERON:0001046,3.97e-07,3;UBERON:0000164,3.97e-07,3;UBERON:0000931,3.97e-07,3;UBERON:0001301,4.26e-07,3;UBERON:0006555,4.26e-07,3;UBERON:0005103,4.26e-07,3;UBERON:0000083,4.26e-07,3;UBERON:0009201,4.26e-07,3;UBERON:0004819,4.26e-07,3;UBERON:0006553,4.26e-07,3;UBERON:0003074,4.26e-07,3;UBERON:0003060,4.26e-07,3;UBERON:0004871,8.40e-07,3;UBERON:0000945,9.33e-07,16;UBERON:0010039,9.33e-07,16 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0.297872853602656,0,0.159992422793407,0,0,0,0,0,0,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,1.29894624606728,2.28023878927589,1.01104889002957,0,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0,0,0,3.72783522436244,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,1.7416975885413,15.4160882644542,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0.190225626112559,0,0,0.502670417600539,0.397912944082302,0,0,0.216138049874694,0.796565093017469,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0.157635144106191,0,0.318909537314974,0,0,0,0,0,2.45882136509518,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0,2.42581237860458,0,0,0,0,0.328281799490123,0.582961673259701,0,0,0,0,0,0,0,0,0,0,4.77335309007557,0,0,0,0.418176592028937,0.655087691238533,1.21377911746339,1.07449492442937,2.87931536182433,1.16653475962614,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0.0897138566094757,0,5.21611903886914,6.38120416534019,7.50921659495787,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0,0.0574354689556133,0.476293691283074,0,0,0.412085900803307,0,0,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0,0.263069711437843,0,0,0.237270036248348,0,0,0.309873682371932,0,0,0,0,0,0,0 | |||
|short_description=p7@Capn5 | |||
}} |
Latest revision as of 13:51, 25 September 2015
Short description: | p7@Capn5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Capn5_5end |
Coexpression cluster: | MCL_coexpression_mm9:566 |
Association with transcript: | -115bp_to_ENSMUST00000107112_5end |
EntrezGene: | Capn5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.66e-13 | 3 |
epithelial cell of tracheobronchial tree | 1.66e-13 | 3 |
branched duct epithelial cell | 1.66e-13 | 3 |
epithelial cell of lower respiratory tract | 1.66e-13 | 3 |
respiratory epithelial cell | 1.66e-13 | 3 |
tracheal epithelial cell | 1.66e-13 | 3 |
tracheoblast | 1.66e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.66e-13 | 3 |
respiratory airway | 1.66e-13 | 3 |
tracheobronchial tree | 1.66e-13 | 3 |
lower respiratory tract | 1.66e-13 | 3 |
adult organism | 2.98e-09 | 51 |
orifice | 8.33e-09 | 5 |
genitourinary system | 8.85e-09 | 5 |
internal genitalia | 1.28e-08 | 9 |
cloaca | 3.97e-07 | 3 |
anal region | 3.97e-07 | 3 |
embryonic cloaca | 3.97e-07 | 3 |
terminal part of digestive tract | 3.97e-07 | 3 |
hindgut | 3.97e-07 | 3 |
primitive urogenital sinus | 3.97e-07 | 3 |
proctodeum | 3.97e-07 | 3 |
epididymis | 4.26e-07 | 3 |
excretory tube | 4.26e-07 | 3 |
mesonephric epithelium | 4.26e-07 | 3 |
mesonephric tubule | 4.26e-07 | 3 |
nephric duct | 4.26e-07 | 3 |
kidney epithelium | 4.26e-07 | 3 |
renal duct | 4.26e-07 | 3 |
mesonephric duct | 4.26e-07 | 3 |
pronephric duct | 4.26e-07 | 3 |
somatic layer of lateral plate mesoderm | 8.40e-07 | 3 |
stomach | 9.33e-07 | 16 |
food storage organ | 9.33e-07 | 16 |