FFCP PHASE1:Mm9::chr7:148459920..148459932,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=126|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:148459920..148459932,-|id=chr7:148459920..148459932,-|ontology_enrichment_celltype=CL:0000239!1.70e-08!6;CL:0000677!1.70e-08!6;CL:0000212!1.70e-08!6;CL:0000584!1.70e-08!6;CL:0000066!2.70e-08!25;CL:0002563!2.78e-08!9;CL:0002251!2.78e-08!9;CL:0000075!4.30e-07!7|ontology_enrichment_celltype_v019_2=CL:0000239,1.09e-14,6;CL:0000677,1.09e-14,6;CL:0000584,1.09e-14,6;CL:0000075,1.74e-12,7;CL:0000066,9.80e-12,25;CL:0002563,1.51e-09,9;CL:0002251,1.51e-09,9;CL:0000682,1.52e-08,3;CL:0000223,3.25e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!8.77e-19!43;UBERON:0000344!6.97e-16!15;UBERON:0005409!2.50e-15!59;UBERON:0001242!2.92e-13!13;UBERON:0000060!2.92e-13!13;UBERON:0001262!2.92e-13!13;UBERON:0004786!2.92e-13!13;UBERON:0004923!1.30e-09!24;UBERON:0003350!2.78e-08!9;UBERON:0004808!2.78e-08!9;UBERON:0001277!2.78e-08!9;UBERON:0001007!1.14e-07!128;UBERON:0001555!1.14e-07!128;UBERON:0007026!1.14e-07!128;UBERON:0004119!2.26e-07!130;UBERON:0000925!2.26e-07!130;UBERON:0006595!2.26e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.57e-41,31;UBERON:0005409,2.03e-27,47;UBERON:0000344,4.94e-23,15;UBERON:0001242,2.75e-18,13;UBERON:0001262,2.75e-18,13;UBERON:0004786,2.75e-18,13;UBERON:0004923,1.52e-15,24;UBERON:0001007,7.73e-14,116;UBERON:0001555,7.73e-14,116;UBERON:0007026,7.73e-14,116;UBERON:0004119,1.73e-13,118;UBERON:0000925,1.73e-13,118;UBERON:0006595,1.73e-13,118;UBERON:0004921,1.18e-11,114;UBERON:0002108,4.66e-11,4;UBERON:0003350,1.51e-09,9;UBERON:0004808,1.51e-09,9;UBERON:0001277,1.51e-09,9;UBERON:0000331,5.37e-09,3;UBERON:0002116,5.37e-09,3;UBERON:0001204,5.37e-09,3;UBERON:0001168,5.37e-09,3;UBERON:0000485,1.12e-07,11|phase1_expression=0,12.9120900826564,11.8299802241279,8.46899791659124,8.01433167914156,2.18243053485457,6.30754129607919,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,15.5192650109604,17.4351053611049,10.3361753540704,8.18447792702242,11.8509177977239,29.8336768546507,16.1299283046356,10.6430645114546,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,3.77792234146472,2.59910566979068,1.79210754838934,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0.117588707135705,0.125666591329675,1.73036477414062,0,0,0,0,0,0,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2429822724977,2.64450566663544,0,0,0.128867461322093,1.21010114774006,2.2237804384487,4.75564065281398,8.54152310780121,13.3406153326449,6.03204501120647,7.36138946552258,3.8992817423824,7.19055526923377,7.99710784536369,5.77509692437665,0,0,0,0.407302655690628,0,0.210407459670956,0.442655759869801,0.590440591918409,1.56998727841375,1.48076596706161,0.592905254174298,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0.505157755894224,0.717589654087649,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.70405924248657,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.436725127492355,0,0,0,6.73997861117323,0,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.505394423527595,0,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0.476293691283074,0.347652977834566,0,0,0.588795680537589,0.342869252385415,0.354951612318675,0.715308569841963,0,0.188218760830661,0.338458431566706,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0.467863216890817,0.214871054048298,0,0,0|short_description=p@chr7:148459920..148459932,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:148459920..148459932,- | |||
|description=CAGE_peak_at_chr7:148459920..148459932,- | |||
|id=chr7:148459920..148459932,- | |||
|ontology_enrichment_celltype=CL:0000239!1.70e-08!6;CL:0000677!1.70e-08!6;CL:0000212!1.70e-08!6;CL:0000584!1.70e-08!6;CL:0000066!2.70e-08!25;CL:0002563!2.78e-08!9;CL:0002251!2.78e-08!9;CL:0000075!4.30e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.09e-14,6;CL:0000677,1.09e-14,6;CL:0000584,1.09e-14,6;CL:0000075,1.74e-12,7;CL:0000066,9.80e-12,25;CL:0002563,1.51e-09,9;CL:0002251,1.51e-09,9;CL:0000682,1.52e-08,3;CL:0000223,3.25e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.77e-19!43;UBERON:0000344!6.97e-16!15;UBERON:0005409!2.50e-15!59;UBERON:0001242!2.92e-13!13;UBERON:0000060!2.92e-13!13;UBERON:0001262!2.92e-13!13;UBERON:0004786!2.92e-13!13;UBERON:0004923!1.30e-09!24;UBERON:0003350!2.78e-08!9;UBERON:0004808!2.78e-08!9;UBERON:0001277!2.78e-08!9;UBERON:0001007!1.14e-07!128;UBERON:0001555!1.14e-07!128;UBERON:0007026!1.14e-07!128;UBERON:0004119!2.26e-07!130;UBERON:0000925!2.26e-07!130;UBERON:0006595!2.26e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.57e-41,31;UBERON:0005409,2.03e-27,47;UBERON:0000344,4.94e-23,15;UBERON:0001242,2.75e-18,13;UBERON:0001262,2.75e-18,13;UBERON:0004786,2.75e-18,13;UBERON:0004923,1.52e-15,24;UBERON:0001007,7.73e-14,116;UBERON:0001555,7.73e-14,116;UBERON:0007026,7.73e-14,116;UBERON:0004119,1.73e-13,118;UBERON:0000925,1.73e-13,118;UBERON:0006595,1.73e-13,118;UBERON:0004921,1.18e-11,114;UBERON:0002108,4.66e-11,4;UBERON:0003350,1.51e-09,9;UBERON:0004808,1.51e-09,9;UBERON:0001277,1.51e-09,9;UBERON:0000331,5.37e-09,3;UBERON:0002116,5.37e-09,3;UBERON:0001204,5.37e-09,3;UBERON:0001168,5.37e-09,3;UBERON:0000485,1.12e-07,11 | |||
|phase1_expression=0,12.9120900826564,11.8299802241279,8.46899791659124,8.01433167914156,2.18243053485457,6.30754129607919,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,15.5192650109604,17.4351053611049,10.3361753540704,8.18447792702242,11.8509177977239,29.8336768546507,16.1299283046356,10.6430645114546,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,3.77792234146472,2.59910566979068,1.79210754838934,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0.117588707135705,0.125666591329675,1.73036477414062,0,0,0,0,0,0,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2429822724977,2.64450566663544,0,0,0.128867461322093,1.21010114774006,2.2237804384487,4.75564065281398,8.54152310780121,13.3406153326449,6.03204501120647,7.36138946552258,3.8992817423824,7.19055526923377,7.99710784536369,5.77509692437665,0,0,0,0.407302655690628,0,0.210407459670956,0.442655759869801,0.590440591918409,1.56998727841375,1.48076596706161,0.592905254174298,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0.505157755894224,0.717589654087649,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.70405924248657,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.436725127492355,0,0,0,6.73997861117323,0,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.505394423527595,0,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0.476293691283074,0.347652977834566,0,0,0.588795680537589,0.342869252385415,0.354951612318675,0.715308569841963,0,0.188218760830661,0.338458431566706,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p@chr7:148459920..148459932,- | |||
}} |
Latest revision as of 12:34, 4 August 2015
Short description: | p@chr7:148459920..148459932, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:148459920..148459932, - |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.09e-14 | 6 |
gut absorptive cell | 1.09e-14 | 6 |
enterocyte | 1.09e-14 | 6 |
columnar/cuboidal epithelial cell | 1.74e-12 | 7 |
epithelial cell | 9.80e-12 | 25 |
intestinal epithelial cell | 1.51e-09 | 9 |
epithelial cell of alimentary canal | 1.51e-09 | 9 |
M cell of gut | 1.52e-08 | 3 |
endodermal cell | 3.25e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.57e-41 | 31 |
gastrointestinal system | 2.03e-27 | 47 |
mucosa | 4.94e-23 | 15 |
intestinal mucosa | 2.75e-18 | 13 |
wall of intestine | 2.75e-18 | 13 |
gastrointestinal system mucosa | 2.75e-18 | 13 |
organ component layer | 1.52e-15 | 24 |
digestive system | 7.73e-14 | 116 |
digestive tract | 7.73e-14 | 116 |
primitive gut | 7.73e-14 | 116 |
endoderm-derived structure | 1.73e-13 | 118 |
endoderm | 1.73e-13 | 118 |
presumptive endoderm | 1.73e-13 | 118 |
subdivision of digestive tract | 1.18e-11 | 114 |
small intestine | 4.66e-11 | 4 |
epithelium of mucosa | 1.51e-09 | 9 |
gastrointestinal system epithelium | 1.51e-09 | 9 |
intestinal epithelium | 1.51e-09 | 9 |
ileal mucosa | 5.37e-09 | 3 |
ileum | 5.37e-09 | 3 |
mucosa of small intestine | 5.37e-09 | 3 |
wall of small intestine | 5.37e-09 | 3 |
simple columnar epithelium | 1.12e-07 | 11 |