FFCP PHASE1:Mm9::chr7:19856953..19856966,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=22323|HGNC=|MCL_coexpression_id=3|UniProt=P70460|association_with_transcript=199bp_to_ENSMUST00000032561_5end|description=CAGE_peak_3_at_Vasp_5end|id=chr7:19856953..19856966,-|ontology_enrichment_celltype=CL:0000063!2.60e-08!66|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!5.77e-12!130;UBERON:0000925!5.77e-12!130;UBERON:0006595!5.77e-12!130;UBERON:0001007!2.47e-11!128;UBERON:0001555!2.47e-11!128;UBERON:0007026!2.47e-11!128;UBERON:0004921!1.72e-10!126;UBERON:0004185!1.72e-10!126;UBERON:0005409!1.38e-09!59;UBERON:0004923!3.32e-09!24;UBERON:0000344!9.35e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.25e-14,118;UBERON:0000925,7.25e-14,118;UBERON:0006595,7.25e-14,118;UBERON:0001007,3.45e-13,116;UBERON:0001555,3.45e-13,116;UBERON:0007026,3.45e-13,116;UBERON:0005409,4.24e-13,47;UBERON:0004921,2.85e-12,114;UBERON:0000160,2.45e-10,31;UBERON:0004923,3.31e-09,24;UBERON:0000344,9.32e-07,15|phase1_expression=1.28119077683835,41.1790981014446,29.1199513209303,25.7094579610806,26.5474736871564,16.4521686473652,19.8570744506197,28.1488845102636,54.2036580283917,77.4753582125798,11.4716038711088,15.8746596400719,21.2288905114695,22.8167250313583,5.99597571268193,5.66930748691513,1.39912375625629,21.1359650790019,15.0825876966313,19.0975343309114,4.16712121740242,8.14185799847259,3.39559725880616,29.5985982167802,24.5467930741872,29.860062133981,28.861053742658,25.210134224249,24.893067948785,23.9428623271934,31.0422714917427,6.98533740805594,2.46025915033828,15.8481681015439,5.48818077527422,5.15327400611326,7.55426618170766,154.438171741919,109.386948233332,106.798843770655,191.763465098111,198.766236122908,156.819844029063,3.02152363141385,3.24406179902447,4.77221555620372,19.559783608701,4.14247797122848,13.8402295122717,7.19390626574849,5.45947044338914,2.87505128729943,15.939347575485,25.3876749703971,33.6093799142464,17.2363822144084,11.1748041576115,12.3761302146586,1.41621522601718,2.64495489636016,0,28.4629406938071,11.5608323494448,50.3943841677583,51.4210508534827,63.2327302302029,22.1704081783619,13.831858991576,0.933206510776299,1.89008313664367,1.26194976810829,2.57085885963423,2.65042249141936,0.857435594504678,0.383381884072945,0.919218786610021,2.20231761998777,0.766124028511126,0.768032666281217,1.18697658957174,1.00636407962651,1.04182674111352,0.558365998002762,0,1.06958773443767,3.53554302568401,1.70846016958924,2.42319279572891,2.27178579999552,3.09843396437821,8.11620568364698,3.44169550792555,1.3599426674155,0.539703191637817,1.29955283489534,0.896053774194671,5.61777680527007,10.3962496772615,8.83272415649754,8.48014978824817,0.563373679106722,8.98285341900225,7.64415719119937,21.3320010945999,14.2884087067401,16.4683912558814,16.1767822404731,7.87868770061514,16.0541487861246,6.38301197978747,5.72501578328248,4.26251669636998,5.07354093963329,5.87818298155228,4.23319345688537,4.14699751387929,13.1013332899218,5.06097749219691,38.9228642857945,8.7354098971601,11.0420759230197,9.21262980956922,31.6865994070808,0.878342391034642,0.83778682725382,27.3339049073193,7.54835284387298,6.59893004092748,4.44745794755726,1.3481157546434,3.20250421973039,0.753926112677186,0.347648640384553,0.767146371990992,1.0389402227978,1.1356888414743,4.48093200941392,10.2013715900276,2.27450482590307,2.10441855886474,2.60240885925407,1.60931473103431,2.34080768746954,3.16480117455002,1.08858398642125,2.0498195245576,3.5606655332697,2.84573707812917,3.23351989399263,1.70195472151037,2.81521798662318,4.16471891612392,2.50242524303038,5.2237824978325,4.11564272815887,4.97585667046233,3.51106593656617,3.86021860672073,4.26245249093389,7.66365358381357,8.44293815931946,8.10279276574567,7.81257627431194,8.46086196513836,7.0962871928194,6.27841650826101,7.51165523918934,6.07179780309281,8.06343264576054,6.40253109908471,6.97191762094359,5.11699955988663,8.34290438105992,5.77087600669599,1.47202963994889,1.44066457330998,41.9631854389423,20.3626936330929,3.41261200856374,3.94802342162745,6.44337306610467,10.0841762311671,15.5664630691409,20.1639163679313,26.0990983849481,24.8695421633256,15.834118154417,14.1259095149217,14.8172706210531,24.268124033664,21.8299430373441,20.9098336917086,6.63837653335786,4.79843752960861,3.38123207019241,5.29493452397817,4.26695471768777,5.6810014111158,7.58838445491087,4.42830443938806,5.18095801876537,5.55287237648102,4.15033677922008,5.83957870006329,6.87956482896211,4.94696647246678,6.49152388443209,7.71766911207734,5.85639459097266,10.64475708568,7.29608520487659,7.68771956926628,17.2521847832825,7.81495990103857,4.05648975048929,3.28352541331245,3.04975602987251,3.37710464954357,15.1497615936616,4.9267767060326,5.37784422258685,8.31750920298422,3.52035372432753,8.5428191295326,13.5684875305028,16.1960927721973,10.4039195110086,9.96591103419487,13.2347457985714,12.7813385478276,12.4333186943445,8.53429445630918,36.1899081454253,78.8663241537129,4.42587845717133,9.93372286697037,1.44495530989013,0.35163505977661,3.27869890753351,3.7870639080656,4.10160685241134,3.51394869866975,3.23135096599198,4.77937595905104,2.67358408898873,3.11384183867716,6.07216052512342,4.38383786866968,3.95287777946523,0.963963949265421,4.82596289708113,7.65682095769198,4.72372182125371,7.58862565673663,2.65490276679926,6.5550771761845,4.53485335447127,5.09233715340925,5.31543407185391,3.99665692327106,7.23599220871019,5.08947221268508,4.63446591900138,2.52829406348653,2.10837217149998,7.21948802737308,3.74483566329167,2.70091641046965,4.91562998374467,4.92975180572662,4.25616560741457,3.21063871683727,3.45552943264454,3.95804433848979,16.4270195644597,12.921756322693,3.08739757276947,1.6488625294148,4.84393280087717,4.04096597018644,3.34242563208782,3.93938159388147,21.2781010739791,1.8542530201051,28.0228244508478,11.5576646059405,13.519200497989,11.8672127912955,9.15851325730869,12.1252431799457,16.9978429993855,15.3946597556024,15.8929969875087,21.0027535963325,3.95419991976419,4.26970880966382,6.91234181259528,8.15444354456428,15.0670168984863,10.7891477107857,11.2408699786457,13.8730649251536,21.6457005397294,6.83473244395618,0.56369293868419,4.33597983527538,3.14371131868485,5.44463327363333,2.84151611651008,3.71703476079712,3.52071715937262,3.6457227756306,2.20204623293993,1.20792060413003,0.864090018773596,7.2682557744481,7.29810775044591,5.95723551555998,5.06691209613401,3.04345382634718,2.98022032171897,4.68762253127878,4.87375439676105,3.73575864808146,3.73413352609499,4.94048307170519,7.30934105548143,6.5424052315424,4.79195298944433,3.40095575422817,3.99574716073316,8.70224409111914,11.4161539127573,7.53439416725543,11.8239959534245,8.97442958909599,11.7902608493486,3.51100472824754,1.6942555278512,2.76195141904306,2.86447756719698,3.26521046453006,0,0.755393897389701,0.675022500231806,0,1.81256963593682,1.03552062350364,2.07574695168353,3.59122386060928,4.26834014385335,5.34834777550247,5.65955539095552,6.80220981265052,7.11189528965169,4.73880631649457,4.81378814387723,5.81203587056734,4.56262739802432,5.47016390019621,5.71213195566283,4.35371036353111,5.22662767496081,4.28664322154766,5.56244764535306,5.40145817298374,5.76920261124629,4.41596760403192,4.80016953339582,5.50174999093946,4.76872379894642,7.55801366488108,4.70546902076653,5.24610568928394,4.57319932181931,3.94604567156764,4.07412341537585,6.17256498823512,5.69448086996036,4.72821515402705,4.91077251803627,5.42278944150881,6.55882477335881,4.99621155875892,9.12333272937093,6.87587372954555,7.07766828654721,7.50010825006353,7.41977073985349|short_description=p3@Vasp}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22323 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=P70460 | |||
|association_with_transcript=199bp_to_ENSMUST00000032561_5end | |||
|cluster_id=chr7:19856953..19856966,- | |||
|description=CAGE_peak_3_at_Vasp_5end | |||
|id=chr7:19856953..19856966,- | |||
|ontology_enrichment_celltype=CL:0000063!2.60e-08!66 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.77e-12!130;UBERON:0000925!5.77e-12!130;UBERON:0006595!5.77e-12!130;UBERON:0001007!2.47e-11!128;UBERON:0001555!2.47e-11!128;UBERON:0007026!2.47e-11!128;UBERON:0004921!1.72e-10!126;UBERON:0004185!1.72e-10!126;UBERON:0005409!1.38e-09!59;UBERON:0004923!3.32e-09!24;UBERON:0000344!9.35e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.25e-14,118;UBERON:0000925,7.25e-14,118;UBERON:0006595,7.25e-14,118;UBERON:0001007,3.45e-13,116;UBERON:0001555,3.45e-13,116;UBERON:0007026,3.45e-13,116;UBERON:0005409,4.24e-13,47;UBERON:0004921,2.85e-12,114;UBERON:0000160,2.45e-10,31;UBERON:0004923,3.31e-09,24;UBERON:0000344,9.32e-07,15 | |||
|phase1_expression=1.28119077683835,41.1790981014446,29.1199513209303,25.7094579610806,26.5474736871564,16.4521686473652,19.8570744506197,28.1488845102636,54.2036580283917,77.4753582125798,11.4716038711088,15.8746596400719,21.2288905114695,22.8167250313583,5.99597571268193,5.66930748691513,1.39912375625629,21.1359650790019,15.0825876966313,19.0975343309114,4.16712121740242,8.14185799847259,3.39559725880616,29.5985982167802,24.5467930741872,29.860062133981,28.861053742658,25.210134224249,24.893067948785,23.9428623271934,31.0422714917427,6.98533740805594,2.46025915033828,15.8481681015439,5.48818077527422,5.15327400611326,7.55426618170766,154.438171741919,109.386948233332,106.798843770655,191.763465098111,198.766236122908,156.819844029063,3.02152363141385,3.24406179902447,4.77221555620372,19.559783608701,4.14247797122848,13.8402295122717,7.19390626574849,5.45947044338914,2.87505128729943,15.939347575485,25.3876749703971,33.6093799142464,17.2363822144084,11.1748041576115,12.3761302146586,1.41621522601718,2.64495489636016,0,28.4629406938071,11.5608323494448,50.3943841677583,51.4210508534827,63.2327302302029,22.1704081783619,13.831858991576,0.933206510776299,1.89008313664367,1.26194976810829,2.57085885963423,2.65042249141936,0.857435594504678,0.383381884072945,0.919218786610021,2.20231761998777,0.766124028511126,0.768032666281217,1.18697658957174,1.00636407962651,1.04182674111352,0.558365998002762,0,1.06958773443767,3.53554302568401,1.70846016958924,2.42319279572891,2.27178579999552,3.09843396437821,8.11620568364698,3.44169550792555,1.3599426674155,0.539703191637817,1.29955283489534,0.896053774194671,5.61777680527007,10.3962496772615,8.83272415649754,8.48014978824817,0.563373679106722,8.98285341900225,7.64415719119937,21.3320010945999,14.2884087067401,16.4683912558814,16.1767822404731,7.87868770061514,16.0541487861246,6.38301197978747,5.72501578328248,4.26251669636998,5.07354093963329,5.87818298155228,4.23319345688537,4.14699751387929,13.1013332899218,5.06097749219691,38.9228642857945,8.7354098971601,11.0420759230197,9.21262980956922,31.6865994070808,0.878342391034642,0.83778682725382,27.3339049073193,7.54835284387298,6.59893004092748,4.44745794755726,1.3481157546434,3.20250421973039,0.753926112677186,0.347648640384553,0.767146371990992,1.0389402227978,1.1356888414743,4.48093200941392,10.2013715900276,2.27450482590307,2.10441855886474,2.60240885925407,1.60931473103431,2.34080768746954,3.16480117455002,1.08858398642125,2.0498195245576,3.5606655332697,2.84573707812917,3.23351989399263,1.70195472151037,2.81521798662318,4.16471891612392,2.50242524303038,5.2237824978325,4.11564272815887,4.97585667046233,3.51106593656617,3.86021860672073,4.26245249093389,7.66365358381357,8.44293815931946,8.10279276574567,7.81257627431194,8.46086196513836,7.0962871928194,6.27841650826101,7.51165523918934,6.07179780309281,8.06343264576054,6.40253109908471,6.97191762094359,5.11699955988663,8.34290438105992,5.77087600669599,1.47202963994889,1.44066457330998,41.9631854389423,20.3626936330929,3.41261200856374,3.94802342162745,6.44337306610467,10.0841762311671,15.5664630691409,20.1639163679313,26.0990983849481,24.8695421633256,15.834118154417,14.1259095149217,14.8172706210531,24.268124033664,21.8299430373441,20.9098336917086,6.63837653335786,4.79843752960861,3.38123207019241,5.29493452397817,4.26695471768777,5.6810014111158,7.58838445491087,4.42830443938806,5.18095801876537,5.55287237648102,4.15033677922008,5.83957870006329,6.87956482896211,4.94696647246678,6.49152388443209,7.71766911207734,5.85639459097266,10.64475708568,7.29608520487659,7.68771956926628,17.2521847832825,7.81495990103857,4.05648975048929,3.28352541331245,3.04975602987251,3.37710464954357,15.1497615936616,4.9267767060326,5.37784422258685,8.31750920298422,3.52035372432753,8.5428191295326,13.5684875305028,16.1960927721973,10.4039195110086,9.96591103419487,13.2347457985714,12.7813385478276,12.4333186943445,8.53429445630918,36.1899081454253,78.8663241537129,4.42587845717133,9.93372286697037,1.44495530989013,0.35163505977661,3.27869890753351,3.7870639080656,4.10160685241134,3.51394869866975,3.23135096599198,4.77937595905104,2.67358408898873,3.11384183867716,6.07216052512342,4.38383786866968,3.95287777946523,0.963963949265421,4.82596289708113,7.65682095769198,4.72372182125371,7.58862565673663,2.65490276679926,6.5550771761845,4.53485335447127,5.09233715340925,5.31543407185391,3.99665692327106,7.23599220871019,5.08947221268508,4.63446591900138,2.52829406348653,2.10837217149998,7.21948802737308,3.74483566329167,2.70091641046965,4.91562998374467,4.92975180572662,4.25616560741457,3.21063871683727,3.45552943264454,3.95804433848979,16.4270195644597,12.921756322693,3.08739757276947,1.6488625294148,4.84393280087717,4.04096597018644,3.34242563208782,3.93938159388147,21.2781010739791,1.8542530201051,28.0228244508478,11.5576646059405,13.519200497989,11.8672127912955,9.15851325730869,12.1252431799457,16.9978429993855,15.3946597556024,15.8929969875087,21.0027535963325,3.95419991976419,4.26970880966382,6.91234181259528,8.15444354456428,15.0670168984863,10.7891477107857,11.2408699786457,13.8730649251536,21.6457005397294,6.83473244395618,0.56369293868419,4.33597983527538,3.14371131868485,5.44463327363333,2.84151611651008,3.71703476079712,3.52071715937262,3.6457227756306,2.20204623293993,1.20792060413003,0.864090018773596,7.2682557744481,7.29810775044591,5.95723551555998,5.06691209613401,3.04345382634718,2.98022032171897,4.68762253127878,4.87375439676105,3.73575864808146,3.73413352609499,4.94048307170519,7.30934105548143,6.5424052315424,4.79195298944433,3.40095575422817,3.99574716073316,8.70224409111914,11.4161539127573,7.53439416725543,11.8239959534245,8.97442958909599,11.7902608493486,3.51100472824754,1.6942555278512,2.76195141904306,2.86447756719698,3.26521046453006,0,0.755393897389701,0.675022500231806,0,1.81256963593682,1.03552062350364,2.07574695168353,3.59122386060928,4.26834014385335,5.34834777550247,5.65955539095552,6.80220981265052,7.11189528965169,4.73880631649457,4.81378814387723,5.81203587056734,4.56262739802432,5.47016390019621,5.71213195566283,4.35371036353111,5.22662767496081,4.28664322154766,5.56244764535306,5.40145817298374,5.76920261124629,4.41596760403192,4.80016953339582,5.50174999093946,4.76872379894642,7.55801366488108,4.70546902076653,5.24610568928394,4.57319932181931,3.94604567156764,4.07412341537585,6.17256498823512,5.69448086996036,4.72821515402705,4.91077251803627,5.42278944150881,6.55882477335881,4.99621155875892,9.12333272937093,6.87587372954555,7.07766828654721,7.50010825006353,7.41977073985349 | |||
|short_description=p3@Vasp | |||
}} |
Latest revision as of 08:15, 26 September 2015
Short description: | p3@Vasp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Vasp_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 199bp_to_ENSMUST00000032561_5end |
EntrezGene: | Vasp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 7.25e-14 | 118 |
endoderm | 7.25e-14 | 118 |
presumptive endoderm | 7.25e-14 | 118 |
digestive system | 3.45e-13 | 116 |
digestive tract | 3.45e-13 | 116 |
primitive gut | 3.45e-13 | 116 |
gastrointestinal system | 4.24e-13 | 47 |
subdivision of digestive tract | 2.85e-12 | 114 |
intestine | 2.45e-10 | 31 |
organ component layer | 3.31e-09 | 24 |
mucosa | 9.32e-07 | 15 |