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FFCP PHASE1:Mm9::chr7:31758196..31758224,-: Difference between revisions

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{{FFCP|EntrezGene=54135|HGNC=|UniProt=Q99KG5|association_with_transcript=183bp_to_ENSMUST00000108116_5end|description=CAGE_peak_3_at_Lsr_5end|id=chr7:31758196..31758224,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!5.51e-20!130;UBERON:0000925!5.51e-20!130;UBERON:0006595!5.51e-20!130;UBERON:0001007!1.68e-19!128;UBERON:0001555!1.68e-19!128;UBERON:0007026!1.68e-19!128;UBERON:0004921!2.33e-18!126;UBERON:0004185!2.33e-18!126;UBERON:0000466!2.02e-16!79;UBERON:0000160!3.33e-14!43;UBERON:0005409!4.21e-14!59;UBERON:0005177!2.61e-11!85;UBERON:0000464!4.36e-11!57;UBERON:0000077!2.83e-09!97;UBERON:0009569!1.72e-08!66;UBERON:0001041!3.15e-08!92;UBERON:0000922!5.30e-08!328;UBERON:0002100!9.42e-08!98;UBERON:0002108!9.73e-08!16;UBERON:0000468!1.39e-07!333;UBERON:0000481!3.53e-07!230|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.14e-15,118;UBERON:0000925,3.14e-15,118;UBERON:0006595,3.14e-15,118;UBERON:0001007,8.42e-15,116;UBERON:0001555,8.42e-15,116;UBERON:0007026,8.42e-15,116;UBERON:0004921,8.69e-14,114;UBERON:0005177,9.44e-13,79;UBERON:0000160,1.06e-09,31;UBERON:0005409,2.46e-09,47;UBERON:0002100,9.95e-09,90;UBERON:0009569,2.92e-08,66|phase1_expression=8.96833543786846,12.563114675017,5.91499011206397,6.0492842261366,3.00537437967808,15.7806515597176,26.1646157466989,0.129123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,5.69790044012167,0,0,25.7587800697385,30.5114343819336,12.0588712464154,12.0613358924541,18.9614684763582,39.144824408013,21.1705308998342,35.0334206835381,0,0,0,23.6858328196045,23.4390849955474,23.2753066139101,0,0,0.523523743973798,0,0,0,0,0,0,7.04152209913235,0.218025156380447,0,0,8.67915814077248,0,0,0,0,0,0,0,2.02316460859598,2.64495489636016,4.43681982454325,0.338844532069132,2.66788438833342,0.449949858640699,0,0,2.09720077362883,2.30530983192933,4.66603255388149,4.59020190327748,6.30974884054146,1.14260393761521,2.20868540951614,1.46988959057945,1.24599112323707,0,2.20231761998777,0.510749352340751,0.768032666281217,2.1101806036831,1.64677758484337,4.16730696445408,2.23346399201105,1.68828783009504,1.06958773443767,2.35702868378934,3.41692033917847,4.28718725398191,0.227178579999552,0,8.40607017234866,12.0459342777394,60.5174486999898,38.8586297979228,46.1341256387845,55.1073071129723,7.5839986871146,0,0,0,15.3519327556582,0,0,0,62.7824018932521,63.8466860997248,77.3452400872618,11.8751234907822,0.776813650941515,0.593768556259299,5.03107447621794,2.74018930480927,2.99800146432876,1.95939432718409,3.17489509266403,1.13099932196708,36.8320501924217,1.01219549843938,0,0.323533699894818,0,0,13.0474232852686,0.878342391034642,0.209446706813455,22.480220858356,0,0,0,1.04853447583376,0.457500602818626,0.502617408451458,0.347648640384553,0.511430914660661,0.83115217823824,0.486723789203273,9.57290020192973,6.09594155989456,25.7777213602348,3.15662783829711,9.36867189331467,8.04657365517155,5.22180176435513,6.32960234910003,4.89862793889561,3.71529788826064,4.59138450342671,1.55222022443409,15.3053274982318,11.7245769704048,9.50136070485324,10.7405908889512,11.9560317167007,4.179025998266,5.35033554660653,12.5391588095651,0,0,0,5.59239585845855,5.62862543954631,1.98068267607116,2.3674473558521,1.18058539048442,1.3884040159864,0.697601834251224,1.60964040839772,1.40118410840603,0.822799249567402,0.492502392237286,0.162137619091711,1.02339991197733,1.09775057645525,0.536825675041487,1.05144974282064,1.74937841044784,5.94753809370836,18.7759902331116,16.2099070406778,13.9342003116263,23.0672755766547,25.2104405779178,20.2364019898832,16.3594038456801,19.9302205848695,13.6700132420929,11.5614196048124,10.1467800740987,11.1129529657898,21.5716658077013,15.3458015411033,15.1347367673319,14.2250925714811,11.5390997735826,19.1603150644237,16.2921062276251,14.7403890247396,16.6923251338958,11.0031574596208,6.34723636312289,6.90794402502049,5.79966670432462,29.3488100816277,7.34118465150814,8.64859578498093,7.19558759631532,8.11440485554012,14.7118067448974,10.4396599230382,20.7141218964584,11.9980067813526,7.4131581560782,0,12.2806512730606,18.0981850406445,28.2888343300765,25.4744327201115,12.0610880340842,12.7479701214957,9.09558776498327,18.2520773615069,20.3694102930226,26.5199980566007,22.6133447546451,16.4250112211349,14.6350235893349,10.4039195110086,11.2946991720875,11.1618338060241,10.651115456523,12.4333186943445,11.2826265693579,1.50791283939272,0,5.90117127622843,9.65778612066564,1.60550589987792,0.468846746368813,0,1.00988370881749,0.94652465824877,0,0,0,0,0,0.809621403349789,0.292255857911312,0,0.642642632843614,10.0777460497871,12.8207234640424,11.0763132360432,14.6823409445557,9.2921596837974,37.1454373317122,47.4647984434659,38.2868311904473,29.825491180958,24.2873766875703,12.6629863652428,21.8120237686503,20.6768479463138,14.5376908650475,15.8127912862498,11.3449097573006,28.5969268833182,16.3855595568492,24.3194325511578,21.2193664681276,21.6355085043574,25.1500032818919,22.8723138636948,29.2286351150015,10.7948985709307,12.2862601101016,41.9003956304428,6.10079135883476,6.29711264114032,9.83100676328941,13.7278195603607,10.833299383174,18.0718118710507,0.370850604021019,0.341741761595705,8.2554747185289,1.11116716421827,0.565105371014073,0.136694227721025,0.228778173206523,0,0.139951452323658,0.138199973804424,59.189578316937,24.516039502538,23.7883776538413,15.5527690783394,18.1906817532588,20.3077184283945,10.7891477107857,14.2990478404831,17.275892170946,5.18459893167171,11.8054469486516,2.25477175473676,9.12050930868271,9.92750942742586,14.1949367491155,9.17034746691891,11.9958849098453,17.3688713195716,18.6192270326849,18.5601039633508,9.66336483304024,8.06484017522023,2.52808896502543,28.1788049253328,16.3310421892075,10.783428307157,6.80301443536429,6.15912199821921,2.28371354087941,2.65841148914239,2.3222283488074,1.600342939755,0.806609481094724,1.16949456887703,0.962118416403295,1.05189211963412,6.80191150845634,47.2830080686758,29.5158588245175,30.8907694109904,13.3300819882211,12.5747258552292,15.0184331899157,7.5028932677673,17.5550236412377,0.564751842617067,0.460325236507177,0,1.3748254587495,0,0,0,0.45032120322422,0,0.51776031175182,2.59468368960442,6.3843979744165,6.31714341290296,8.50873509739029,2.72497111416377,2.75765262675021,6.00066165064361,4.94484137373346,5.77654577265267,5.81203587056734,3.54871019846336,6.41329560712659,6.46126401542189,5.44213795441389,4.65227298540468,7.62069906052918,5.56244764535306,5.59436739344745,6.59337441285291,4.71036544430071,5.48590803816665,3.72699192934609,5.24559617884106,5.0871245821315,4.89368778159719,6.09225176820071,5.48783918618318,5.26139422875686,4.88894809845102,5.05028044491965,5.69448086996036,5.81176446015824,4.91077251803627,5.88759996506671,6.17301155139652,6.74488560432454,6.55008503647143,6.87587372954555,0.956441660344217,1.32354851471709,0.231867835620421|short_description=p3@Lsr}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=54135
|HGNC=
|TSSclassifier=NA
|UniProt=Q99KG5
|association_with_transcript=183bp_to_ENSMUST00000108116_5end
|cluster_id=chr7:31758196..31758224,-
|description=CAGE_peak_3_at_Lsr_5end
|id=chr7:31758196..31758224,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!5.51e-20!130;UBERON:0000925!5.51e-20!130;UBERON:0006595!5.51e-20!130;UBERON:0001007!1.68e-19!128;UBERON:0001555!1.68e-19!128;UBERON:0007026!1.68e-19!128;UBERON:0004921!2.33e-18!126;UBERON:0004185!2.33e-18!126;UBERON:0000466!2.02e-16!79;UBERON:0000160!3.33e-14!43;UBERON:0005409!4.21e-14!59;UBERON:0005177!2.61e-11!85;UBERON:0000464!4.36e-11!57;UBERON:0000077!2.83e-09!97;UBERON:0009569!1.72e-08!66;UBERON:0001041!3.15e-08!92;UBERON:0000922!5.30e-08!328;UBERON:0002100!9.42e-08!98;UBERON:0002108!9.73e-08!16;UBERON:0000468!1.39e-07!333;UBERON:0000481!3.53e-07!230
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.14e-15,118;UBERON:0000925,3.14e-15,118;UBERON:0006595,3.14e-15,118;UBERON:0001007,8.42e-15,116;UBERON:0001555,8.42e-15,116;UBERON:0007026,8.42e-15,116;UBERON:0004921,8.69e-14,114;UBERON:0005177,9.44e-13,79;UBERON:0000160,1.06e-09,31;UBERON:0005409,2.46e-09,47;UBERON:0002100,9.95e-09,90;UBERON:0009569,2.92e-08,66
|phase1_expression=8.96833543786846,12.563114675017,5.91499011206397,6.0492842261366,3.00537437967808,15.7806515597176,26.1646157466989,0.129123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,5.69790044012167,0,0,25.7587800697385,30.5114343819336,12.0588712464154,12.0613358924541,18.9614684763582,39.144824408013,21.1705308998342,35.0334206835381,0,0,0,23.6858328196045,23.4390849955474,23.2753066139101,0,0,0.523523743973798,0,0,0,0,0,0,7.04152209913235,0.218025156380447,0,0,8.67915814077248,0,0,0,0,0,0,0,2.02316460859598,2.64495489636016,4.43681982454325,0.338844532069132,2.66788438833342,0.449949858640699,0,0,2.09720077362883,2.30530983192933,4.66603255388149,4.59020190327748,6.30974884054146,1.14260393761521,2.20868540951614,1.46988959057945,1.24599112323707,0,2.20231761998777,0.510749352340751,0.768032666281217,2.1101806036831,1.64677758484337,4.16730696445408,2.23346399201105,1.68828783009504,1.06958773443767,2.35702868378934,3.41692033917847,4.28718725398191,0.227178579999552,0,8.40607017234866,12.0459342777394,60.5174486999898,38.8586297979228,46.1341256387845,55.1073071129723,7.5839986871146,0,0,0,15.3519327556582,0,0,0,62.7824018932521,63.8466860997248,77.3452400872618,11.8751234907822,0.776813650941515,0.593768556259299,5.03107447621794,2.74018930480927,2.99800146432876,1.95939432718409,3.17489509266403,1.13099932196708,36.8320501924217,1.01219549843938,0,0.323533699894818,0,0,13.0474232852686,0.878342391034642,0.209446706813455,22.480220858356,0,0,0,1.04853447583376,0.457500602818626,0.502617408451458,0.347648640384553,0.511430914660661,0.83115217823824,0.486723789203273,9.57290020192973,6.09594155989456,25.7777213602348,3.15662783829711,9.36867189331467,8.04657365517155,5.22180176435513,6.32960234910003,4.89862793889561,3.71529788826064,4.59138450342671,1.55222022443409,15.3053274982318,11.7245769704048,9.50136070485324,10.7405908889512,11.9560317167007,4.179025998266,5.35033554660653,12.5391588095651,0,0,0,5.59239585845855,5.62862543954631,1.98068267607116,2.3674473558521,1.18058539048442,1.3884040159864,0.697601834251224,1.60964040839772,1.40118410840603,0.822799249567402,0.492502392237286,0.162137619091711,1.02339991197733,1.09775057645525,0.536825675041487,1.05144974282064,1.74937841044784,5.94753809370836,18.7759902331116,16.2099070406778,13.9342003116263,23.0672755766547,25.2104405779178,20.2364019898832,16.3594038456801,19.9302205848695,13.6700132420929,11.5614196048124,10.1467800740987,11.1129529657898,21.5716658077013,15.3458015411033,15.1347367673319,14.2250925714811,11.5390997735826,19.1603150644237,16.2921062276251,14.7403890247396,16.6923251338958,11.0031574596208,6.34723636312289,6.90794402502049,5.79966670432462,29.3488100816277,7.34118465150814,8.64859578498093,7.19558759631532,8.11440485554012,14.7118067448974,10.4396599230382,20.7141218964584,11.9980067813526,7.4131581560782,0,12.2806512730606,18.0981850406445,28.2888343300765,25.4744327201115,12.0610880340842,12.7479701214957,9.09558776498327,18.2520773615069,20.3694102930226,26.5199980566007,22.6133447546451,16.4250112211349,14.6350235893349,10.4039195110086,11.2946991720875,11.1618338060241,10.651115456523,12.4333186943445,11.2826265693579,1.50791283939272,0,5.90117127622843,9.65778612066564,1.60550589987792,0.468846746368813,0,1.00988370881749,0.94652465824877,0,0,0,0,0,0.809621403349789,0.292255857911312,0,0.642642632843614,10.0777460497871,12.8207234640424,11.0763132360432,14.6823409445557,9.2921596837974,37.1454373317122,47.4647984434659,38.2868311904473,29.825491180958,24.2873766875703,12.6629863652428,21.8120237686503,20.6768479463138,14.5376908650475,15.8127912862498,11.3449097573006,28.5969268833182,16.3855595568492,24.3194325511578,21.2193664681276,21.6355085043574,25.1500032818919,22.8723138636948,29.2286351150015,10.7948985709307,12.2862601101016,41.9003956304428,6.10079135883476,6.29711264114032,9.83100676328941,13.7278195603607,10.833299383174,18.0718118710507,0.370850604021019,0.341741761595705,8.2554747185289,1.11116716421827,0.565105371014073,0.136694227721025,0.228778173206523,0,0.139951452323658,0.138199973804424,59.189578316937,24.516039502538,23.7883776538413,15.5527690783394,18.1906817532588,20.3077184283945,10.7891477107857,14.2990478404831,17.275892170946,5.18459893167171,11.8054469486516,2.25477175473676,9.12050930868271,9.92750942742586,14.1949367491155,9.17034746691891,11.9958849098453,17.3688713195716,18.6192270326849,18.5601039633508,9.66336483304024,8.06484017522023,2.52808896502543,28.1788049253328,16.3310421892075,10.783428307157,6.80301443536429,6.15912199821921,2.28371354087941,2.65841148914239,2.3222283488074,1.600342939755,0.806609481094724,1.16949456887703,0.962118416403295,1.05189211963412,6.80191150845634,47.2830080686758,29.5158588245175,30.8907694109904,13.3300819882211,12.5747258552292,15.0184331899157,7.5028932677673,17.5550236412377,0.564751842617067,0.460325236507177,0,1.3748254587495,0,0,0,0.45032120322422,0,0.51776031175182,2.59468368960442,6.3843979744165,6.31714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|short_description=p3@Lsr
}}

Latest revision as of 15:27, 26 September 2015

Short description:p3@Lsr
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Lsr_5end
Coexpression cluster:NA
Association with transcript: 183bp_to_ENSMUST00000108116_5end
EntrezGene:Lsr
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Lsr

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.97
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.05
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I715.78
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I826.16
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D125.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D230.51
GP2+ M cell, pool1.CNhs13228.11845-124H912.06
GP2+ M cell, pool2.CNhs13231.11846-124I112.06
GP2+ M cell, pool3.CNhs13240.11847-124I218.96
Ileum epithelium, pool1.CNhs13199.10252-104B939.14
Ileum epithelium, pool2.CNhs13232.10253-104C121.17
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C835.03
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F523.69
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F623.44
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F723.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.67
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.59
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.41
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.05
Mouse hepatocyte, donor1.CNhs13078.11714-123C460.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C838.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F446.13
Mouse hepatocyte, donor8.CNhs13091.11824-124F655.11
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G162.78
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G263.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G377.35
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.88
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C55.03
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C13.17
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A836.83
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H722.48
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.57
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.10
epididymis, adult.CNhs10490.58-23B225.78
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C69.37
eyeball, embryo E14.CNhs10521.399-16E28.05
eyeball, embryo E15.CNhs10593.426-16C95.22
eyeball, embryo E17.CNhs11023.1261-18D46.33
eyeball, neonate N00.CNhs11207.633-15C64.90
eyeball, neonate N01.CNhs11140.1532-43E73.72
eyeball, neonate N02.CNhs11205.1551-44G84.59
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E215.31
forelimb, embryo E12.CNhs10600.359-14H211.72
forelimb, embryo E13.CNhs10589.384-1E29.50
forelimb, embryo E14.CNhs10577.413-26A810.74
forelimb, embryo E15.CNhs11007.437-20E711.96
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B55.35
gonad, embryo E13.CNhs11044.1564-45I612.54
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E95.59
heart, embryo E12.CNhs11015.353-12F55.63
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A318.78
intestine, embryo E12.CNhs11019.1251-16I516.21
intestine, embryo E13.CNhs11010.381-16D513.93
intestine, embryo E15.CNhs10602.976-16D823.07
intestine, embryo E16.CNhs10585.463-22H425.21
intestine, embryo E17.CNhs10582.482-18D320.24
intestine, embryo E18.CNhs10526.1289-20F716.36
intestine, neonate N00.CNhs11126.644-26D119.93
intestine, neonate N01.CNhs11192.1322-23E913.67
intestine, neonate N06.CNhs11102.688-20B811.56
intestine, neonate N07.CNhs11095.720-20F210.15
intestine, neonate N10.CNhs11098.755-23A511.11
intestine, neonate N20.CNhs11187.827-18D121.57
intestine, neonate N25.CNhs11121.1352-25E315.35
intestine, neonate N30.CNhs11131.1384-42G115.13
kidney, embryo E14.CNhs10606.411-4I914.23
kidney, embryo E15.CNhs10997.434-16F811.54
kidney, embryo E16.CNhs10584.464-22A519.16
kidney, embryo E17.CNhs11028.483-18I216.29
kidney, embryo E18.CNhs11001.1288-20C714.74
kidney, neonate N00.CNhs11214.646-21G716.69
kidney, neonate N10.CNhs11206.758-6D511.00
kidney, neonate N20.CNhs11113.832-19I16.35
kidney, neonate N25.CNhs11122.1353-25F36.91
kidney, neonate N30.CNhs11203.1385-42H15.80
liver, adult pregnant day01.CNhs10466.508-5B229.35
liver, embryo E12.CNhs10601.355-15F87.34
liver, embryo E13.CNhs10524.378-3H68.65
liver, embryo E14.CNhs10594.409-16E17.20
liver, embryo E15.CNhs10520.433-16D78.11
liver, embryo E16.CNhs10523.462-17F514.71
liver, embryo E17.CNhs10510.481-18A310.44
liver, embryo E18.CNhs10579.499-43G420.71
liver, neonate N00.CNhs11117.641-24F412.00
liver, neonate N03.CNhs11123.1345-25G27.41
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H212.28
liver, neonate N10.CNhs11115.751-24B918.10
liver, neonate N20.CNhs11220.823-25A328.29
liver, neonate N25.CNhs11198.1368-26H125.47
liver, neonate N30.CNhs11106.1382-42D112.06
lung, adult.CNhs10474.28-22B112.75
lung, embryo E12.CNhs10522.354-16G29.10
lung, embryo E14.CNhs10604.404-26F818.25
lung, embryo E15.CNhs11020.432-17C520.37
lung, embryo E16.CNhs10998.458-17B626.52
lung, embryo E17.CNhs10605.480-44A622.61
lung, embryo E18.CNhs10583.1287-20I616.43
lung, neonate N00.CNhs11224.640-42C614.64
lung, neonate N06.CNhs11212.683-20E510.40
lung, neonate N07.CNhs11111.715-19A311.29
lung, neonate N10.CNhs11219.750-23E611.16
lung, neonate N20.CNhs11109.822-18A410.65
lung, neonate N25.CNhs11119.1359-25C712.43
lung, neonate N30.CNhs11133.1394-42H211.28
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H29.66
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I710.08
ovary, embryo E18.CNhs11040.505-44H712.82
ovary, neonate N00.CNhs11217.1299-22I411.08
oviduct, adult pregnant day01.CNhs10500.988-6G614.68
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F437.15
pancreas, embryo E15.CNhs11042.1556-45F247.46
pancreas, embryo E16.CNhs11003.460-26E538.29
pancreas, embryo E17.CNhs10599.1558-45G329.83
pancreas, embryo E18.CNhs10580.1535-43I724.29
pancreas, neonate N00.CNhs11105.645-26G912.66
pancreas, neonate N01.CNhs11138.1531-43D721.81
pancreas, neonate N02.CNhs11139.1539-43D820.68
pancreas, neonate N16.CNhs11136.787-43B614.54
pancreas, neonate N25.CNhs11094.1555-45E215.81
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G828.60
pituitary gland, embryo E12.CNhs11018.346-16E616.39
pituitary gland, embryo E13.CNhs11009.370-44C724.32
pituitary gland, embryo E14.CNhs11037.398-44A521.22
pituitary gland, embryo E15.CNhs10592.427-16B921.64
pituitary gland, embryo E16.CNhs11036.449-43F625.15
pituitary gland, embryo E17.CNhs11039.1265-44F522.87
pituitary gland, neonate N00.CNhs11190.1308-22E929.23
placenta, adult pregnant day10.CNhs10472.539-13I710.79
placenta, adult pregnant day17.CNhs10464.577-18G312.29
prostate, adult.CNhs10470.859-1F841.90
skin, adult.CNhs10492.30-1C36.10
skin, neonate N00.CNhs11124.650-25G46.30
skin, neonate N03.CNhs11215.662-22H39.83
skin, neonate N06.CNhs11097.693-20I513.73
skin, neonate N10.CNhs11108.762-6C410.83
small intestine, neonate N16.CNhs11114.790-21I118.07
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C18.26
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H659.19
stomach, embryo E12.CNhs10588.356-43E324.52
stomach, embryo E15.CNhs10603.1252-16G823.79
stomach, embryo E16.CNhs11022.459-17D415.55
stomach, embryo E17.CNhs11006.1035-18D518.19
stomach, embryo E18.CNhs10999.1286-20C620.31
stomach, neonate N03.CNhs11193.1340-24B810.79
stomach, neonate N07.CNhs11210.718-18A914.30
stomach, neonate N25.CNhs11104.1355-25E417.28
stomach, neonate N30.CNhs11134.1386-42I15.18
submandibular gland, adult.CNhs10469.59-29C111.81
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F59.12
testis, embryo E15.CNhs11034.443-27C59.93
testis, embryo E16.CNhs11033.470-26G514.19
testis, embryo E17.CNhs11029.486-18I59.17
testis, embryo E18.CNhs11027.503-18G512.00
testis, neonate N00.CNhs11189.1300-22B717.37
testis, neonate N07.CNhs11222.726-26I418.62
testis, neonate N10.CNhs11204.763-44D918.56
testis, neonate N20.CNhs11110.839-18H39.66
testis, neonate N30.CNhs11130.1391-42E28.06
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I428.18
thymus, embryo E15.CNhs11005.430-45I216.33
thymus, embryo E16.CNhs11002.456-26C510.78
thymus, embryo E17.CNhs10581.478-18C16.80
thymus, embryo E18.CNhs10595.1273-19G46.16
thymus, neonate N02.CNhs11181.1541-43F82.28
thymus, neonate N03.CNhs11137.2104-43C72.66
thymus, neonate N06.CNhs11197.681-26C42.32
thymus, neonate N07.CNhs11211.713-19D31.60
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B46.80
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H347.28
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F729.52
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G530.89
urinary bladder, adult.CNhs10481.879-12E413.33
uterus, adult pregnant day19.CNhs10497.590-15F512.57
uterus, adult.CNhs10509.92-27E515.02
vagina, adult.CNhs10502.89-27D57.50
vesicular gland, adult.CNhs10491.51-27F817.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I82.59
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H26.32
whole body, embryo E14.5.CNhs10578.420-27D28.51
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.44
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.69
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.89
whole body, embryo E17.5.CNhs10513.490-9F96.17
whole body, embryo E17.CNhs10517.475-3I56.74
whole body, embryo E18.CNhs10516.493-3B36.55
whole body, neonate N00.CNhs10525.657-19C26.88
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure3.14e-15118
endoderm3.14e-15118
presumptive endoderm3.14e-15118
digestive system8.42e-15116
digestive tract8.42e-15116
primitive gut8.42e-15116
subdivision of digestive tract8.69e-14114
trunk region element9.44e-1379
intestine1.06e-0931
gastrointestinal system2.46e-0947
trunk9.95e-0990
subdivision of trunk2.92e-0866
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