FFCP PHASE1:Mm9::chr7:89003879..89003896,+: Difference between revisions
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{{FFCP|EntrezGene=107769|HGNC=|MCL_coexpression_id=51|UniProt=P58749|association_with_transcript=0bp_to_ENSMUST00000041890_5end|description=CAGE_peak_5_at_Tm6sf1_5end|id=chr7:89003879..89003896,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!6.27e-07!23;UBERON:0000974!6.27e-07!23;UBERON:0004807!6.27e-07!23;UBERON:0005058!6.27e-07!23;UBERON:0003351!6.27e-07!23;UBERON:0009113!6.27e-07!23;UBERON:0003295!6.27e-07!23;UBERON:0009722!6.27e-07!23;UBERON:0005562!6.27e-07!23;UBERON:0007690!6.27e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.25e-15,23;UBERON:0000974,3.25e-15,23;UBERON:0004807,3.25e-15,23;UBERON:0005058,3.25e-15,23;UBERON:0003351,3.25e-15,23;UBERON:0009113,3.25e-15,23;UBERON:0003295,3.25e-15,23;UBERON:0009722,3.25e-15,23;UBERON:0005562,3.25e-15,23;UBERON:0007690,3.25e-15,23;UBERON:0006562,2.00e-14,24;UBERON:0003408,2.00e-14,24;UBERON:0001557,2.00e-14,24;UBERON:0001042,2.00e-14,24;UBERON:0008814,2.00e-14,24;UBERON:0009145,2.00e-14,24;UBERON:0000072,2.08e-12,27;UBERON:0004177,2.67e-11,29;UBERON:0005057,2.67e-11,29;UBERON:0000077,9.51e-09,35;UBERON:0007811,2.08e-08,36;UBERON:0000153,2.04e-07,43;UBERON:0000065,5.77e-07,41|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.84473233291,0,0,0.0797721589953364,0.171200729931206,0,0,0.202475267389826,0,0.788655413395594,0.411343300817216,0.84877930359606,0.17008658030214,0.397163804803541,0.522399578277871,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0.139986421625363,0,0.503347818173209,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0.919218786610021,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0.23517741427141,0,0,0.289198713839823,0.884610551949874,1.45590164952668,0.441683036920787,0.484875253135222,0,0.292780797011547,0,0,0.838705871541442,0,0.635351135365324,0.149790639404823,0.457500602818626,0,0.521472960576829,0,0.41557608911912,0.162241263067758,0.203678727700633,0,0,0,0,0,0.360124259610698,0.60281927134286,0.544291993210623,0.2562274405697,0.0937017245597288,0,0,0,0.351902248327898,0.219195732427575,0.278047249225598,1.0447564995665,0.823128545631774,0,0,0.772043721344145,0.568326998791185,0,0,0,0,0,0.154267112887378,0.232533944750408,0.536546802799238,0,0,0,0.0810688095458557,0.438599962275997,0,0,0,0.205809224758569,0,0,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0.407302655690628,0.193952487167626,0,0.189709611372772,0.442830443938806,0.156998727841375,0,0,0,0,0.224862112384854,0.202860121388503,0,0,0,0.486405680325106,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0.502518772325447,0,0.390267295715598,0.315270288212382,0,0,0,0.172684981865896,0,0,0.54390568381871,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0.325773918707152,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0.129358683782755,0,0.354680467284547,0,0.164549020602121,0,0,0,0,0.16488625294148,0.322928853391811,0.361877549568935,0,0,0,0,0.512612642393558,0,0,0.376736914009382,0,0,0.849892149969277,0.839708713941948,0.552799895217695,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0,0.352071715937262,0.13020438484395,0.104859344425711,0.241584120826006,0,2.52808896502543,1.21635129174099,2.77319584345034,4.80707045017842,3.22248052201467,4.56967115996909,5.4087952283986,5.75989155980851,3.43285929823702,3.12447907285499,6.25122347848411,3.70339946811059,3.17499077413087,2.45441494581295,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0.564751842617067,0.920650473014354,1.14579102687879,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0.399024873401031,0.341467211508268,2.18796045361465,0.209613162627982,0.919217542250071,1.77797382241292,1.23621034343337,2.24643446714271,0.505394423527595,3.04175159868288,2.64076877940507,1.87283014939765,2.36893063898016,2.92920891673628,2.85776214769844,2.54945517078682,1.54327376370964,2.47251540481984,1.61918812147837,1.71434626192708,2.48466128623072,2.86123427936785,2.0348498328526,1.78807822789128,1.94613598150856,2.19513567447327,2.10455769150274,2.17286582153379,1.12228454331548,2.60997039873183,2.46261205938909,0.818462086339379,2.32405261778949,1.15743966588685,0.749431733813838,1.40358965067245,0.859484216193193,1.53030665655075,0.441182838239031,0.231867835620421|short_description=p5@Tm6sf1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=107769 | |||
|HGNC= | |||
|MCL_coexpression_id=51 | |||
|TSSclassifier=NA | |||
|UniProt=P58749 | |||
|association_with_transcript=0bp_to_ENSMUST00000041890_5end | |||
|cluster_id=chr7:89003879..89003896,+ | |||
|description=CAGE_peak_5_at_Tm6sf1_5end | |||
|id=chr7:89003879..89003896,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!6.27e-07!23;UBERON:0000974!6.27e-07!23;UBERON:0004807!6.27e-07!23;UBERON:0005058!6.27e-07!23;UBERON:0003351!6.27e-07!23;UBERON:0009113!6.27e-07!23;UBERON:0003295!6.27e-07!23;UBERON:0009722!6.27e-07!23;UBERON:0005562!6.27e-07!23;UBERON:0007690!6.27e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.25e-15,23;UBERON:0000974,3.25e-15,23;UBERON:0004807,3.25e-15,23;UBERON:0005058,3.25e-15,23;UBERON:0003351,3.25e-15,23;UBERON:0009113,3.25e-15,23;UBERON:0003295,3.25e-15,23;UBERON:0009722,3.25e-15,23;UBERON:0005562,3.25e-15,23;UBERON:0007690,3.25e-15,23;UBERON:0006562,2.00e-14,24;UBERON:0003408,2.00e-14,24;UBERON:0001557,2.00e-14,24;UBERON:0001042,2.00e-14,24;UBERON:0008814,2.00e-14,24;UBERON:0009145,2.00e-14,24;UBERON:0000072,2.08e-12,27;UBERON:0004177,2.67e-11,29;UBERON:0005057,2.67e-11,29;UBERON:0000077,9.51e-09,35;UBERON:0007811,2.08e-08,36;UBERON:0000153,2.04e-07,43;UBERON:0000065,5.77e-07,41 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.84473233291,0,0,0.0797721589953364,0.171200729931206,0,0,0.202475267389826,0,0.788655413395594,0.411343300817216,0.84877930359606,0.17008658030214,0.397163804803541,0.522399578277871,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0.139986421625363,0,0.503347818173209,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0.919218786610021,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0.23517741427141,0,0,0.289198713839823,0.884610551949874,1.45590164952668,0.441683036920787,0.484875253135222,0,0.292780797011547,0,0,0.838705871541442,0,0.635351135365324,0.149790639404823,0.457500602818626,0,0.521472960576829,0,0.41557608911912,0.162241263067758,0.203678727700633,0,0,0,0,0,0.360124259610698,0.60281927134286,0.544291993210623,0.2562274405697,0.0937017245597288,0,0,0,0.351902248327898,0.219195732427575,0.278047249225598,1.0447564995665,0.823128545631774,0,0,0.772043721344145,0.568326998791185,0,0,0,0,0,0.154267112887378,0.232533944750408,0.536546802799238,0,0,0,0.0810688095458557,0.438599962275997,0,0,0,0.205809224758569,0,0,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0.407302655690628,0.193952487167626,0,0.189709611372772,0.442830443938806,0.156998727841375,0,0,0,0,0.224862112384854,0.202860121388503,0,0,0,0.486405680325106,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0.502518772325447,0,0.390267295715598,0.315270288212382,0,0,0,0.172684981865896,0,0,0.54390568381871,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0.325773918707152,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0.129358683782755,0,0.354680467284547,0,0.164549020602121,0,0,0,0,0.16488625294148,0.322928853391811,0.361877549568935,0,0,0,0,0.512612642393558,0,0,0.376736914009382,0,0,0.849892149969277,0.839708713941948,0.552799895217695,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0,0.352071715937262,0.13020438484395,0.104859344425711,0.241584120826006,0,2.52808896502543,1.21635129174099,2.77319584345034,4.80707045017842,3.22248052201467,4.56967115996909,5.4087952283986,5.75989155980851,3.43285929823702,3.12447907285499,6.25122347848411,3.70339946811059,3.17499077413087,2.45441494581295,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0.564751842617067,0.920650473014354,1.14579102687879,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0.399024873401031,0.341467211508268,2.18796045361465,0.209613162627982,0.919217542250071,1.77797382241292,1.23621034343337,2.24643446714271,0.505394423527595,3.04175159868288,2.64076877940507,1.87283014939765,2.36893063898016,2.92920891673628,2.85776214769844,2.54945517078682,1.54327376370964,2.47251540481984,1.61918812147837,1.71434626192708,2.48466128623072,2.86123427936785,2.0348498328526,1.78807822789128,1.94613598150856,2.19513567447327,2.10455769150274,2.17286582153379,1.12228454331548,2.60997039873183,2.46261205938909,0.818462086339379,2.32405261778949,1.15743966588685,0.749431733813838,1.40358965067245,0.859484216193193,1.53030665655075,0.441182838239031,0.231867835620421 | |||
|short_description=p5@Tm6sf1 | |||
}} |
Latest revision as of 04:18, 27 September 2015
Short description: | p5@Tm6sf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Tm6sf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:51 |
Association with transcript: | 0bp_to_ENSMUST00000041890_5end |
EntrezGene: | Tm6sf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.25e-15 | 23 |
neck | 3.25e-15 | 23 |
respiratory system epithelium | 3.25e-15 | 23 |
hemolymphoid system gland | 3.25e-15 | 23 |
pharyngeal epithelium | 3.25e-15 | 23 |
thymic region | 3.25e-15 | 23 |
pharyngeal gland | 3.25e-15 | 23 |
entire pharyngeal arch endoderm | 3.25e-15 | 23 |
thymus primordium | 3.25e-15 | 23 |
early pharyngeal endoderm | 3.25e-15 | 23 |
pharynx | 2.00e-14 | 24 |
gland of gut | 2.00e-14 | 24 |
upper respiratory tract | 2.00e-14 | 24 |
chordate pharynx | 2.00e-14 | 24 |
pharyngeal arch system | 2.00e-14 | 24 |
pharyngeal region of foregut | 2.00e-14 | 24 |
segment of respiratory tract | 2.08e-12 | 27 |
hemopoietic organ | 2.67e-11 | 29 |
immune organ | 2.67e-11 | 29 |
mixed endoderm/mesoderm-derived structure | 9.51e-09 | 35 |
craniocervical region | 2.08e-08 | 36 |
anterior region of body | 2.04e-07 | 43 |
respiratory tract | 5.77e-07 | 41 |