FFCP PHASE1:Mm9::chr8:125921662..125921675,+: Difference between revisions
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{{FFCP|EntrezGene=66855|HGNC=|MCL_coexpression_id=129|UniProt=|association_with_transcript=-37bp_to_uc009nvr.1_5end|description=CAGE_peak_5_at_Tcf25_5end|id=chr8:125921662..125921675,+|ontology_enrichment_celltype=CL:0002027!8.64e-10!3;CL:0002006!8.64e-10!3;CL:0002024!8.64e-10!3|ontology_enrichment_celltype_v019_2=CL:0002027,1.96e-24,3;CL:0002006,1.96e-24,3;CL:0002024,1.96e-24,3;CL:0000553,1.44e-12,6;CL:0000556,1.44e-12,6;CL:0000050,1.41e-08,9;CL:0002031,5.82e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.06e-21!23;UBERON:0000974!1.06e-21!23;UBERON:0004807!1.06e-21!23;UBERON:0005058!1.06e-21!23;UBERON:0003351!1.06e-21!23;UBERON:0009113!1.06e-21!23;UBERON:0003295!1.06e-21!23;UBERON:0009722!1.06e-21!23;UBERON:0005562!1.06e-21!23;UBERON:0007690!1.06e-21!23;UBERON:0006562!1.15e-20!24;UBERON:0003408!1.15e-20!24;UBERON:0001557!1.15e-20!24;UBERON:0001042!1.15e-20!24;UBERON:0008814!1.15e-20!24;UBERON:0009145!1.15e-20!24;UBERON:0004177!3.57e-19!29;UBERON:0000072!5.03e-18!27;UBERON:0002193!1.09e-17!48;UBERON:0002390!4.82e-17!45;UBERON:0003061!4.82e-17!45;UBERON:0000063!3.38e-13!35;UBERON:0000065!1.81e-12!41;UBERON:0003081!3.12e-12!88;UBERON:0002405!4.05e-12!70;UBERON:0001004!4.29e-12!42;UBERON:0005057!6.83e-11!51;UBERON:0002368!1.23e-08!60;UBERON:0003929!1.71e-08!55;UBERON:0002530!1.04e-07!65;UBERON:0000490!1.36e-07!66;UBERON:0005911!4.38e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.74e-14,45;UBERON:0003061,6.74e-14,45;UBERON:0002193,5.43e-13,48;UBERON:0002405,5.43e-13,48;UBERON:0002370,1.57e-12,23;UBERON:0000974,1.57e-12,23;UBERON:0004807,1.57e-12,23;UBERON:0005058,1.57e-12,23;UBERON:0003351,1.57e-12,23;UBERON:0009113,1.57e-12,23;UBERON:0003295,1.57e-12,23;UBERON:0009722,1.57e-12,23;UBERON:0005562,1.57e-12,23;UBERON:0007690,1.57e-12,23;UBERON:0006562,5.32e-12,24;UBERON:0003408,5.32e-12,24;UBERON:0001557,5.32e-12,24;UBERON:0001042,5.32e-12,24;UBERON:0008814,5.32e-12,24;UBERON:0009145,5.32e-12,24;UBERON:0000072,1.20e-10,27;UBERON:0004177,6.71e-10,29;UBERON:0005057,6.71e-10,29;UBERON:0000077,3.65e-08,35;UBERON:0007811,6.25e-08,36;UBERON:0000065,6.23e-07,41;UBERON:0003081,7.52e-07,87;UBERON:0001004,9.25e-07,42|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,1.61980213911861,2.79824751251259,0,0,0,0,1.39007331681239,1.56719873483361,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0.173485326766136,0,0,0,0,0,0.741584903203122,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683471138605126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,2.02725215290164,7.39518891586756,4.28738715826724,2.50637373934474,1.98681354781265,0.721172697119813,0.590758108698309,1.00966449948148,0.304827226619999,0.302478555410522,0.38983152295901,0.577271049841977,0.935015217452552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p5@Tcf25}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66855 | |||
|HGNC= | |||
|MCL_coexpression_id=129 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-37bp_to_uc009nvr.1_5end | |||
|cluster_id=chr8:125921662..125921675,+ | |||
|description=CAGE_peak_5_at_Tcf25_5end | |||
|id=chr8:125921662..125921675,+ | |||
|ontology_enrichment_celltype=CL:0002027!8.64e-10!3;CL:0002006!8.64e-10!3;CL:0002024!8.64e-10!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,1.96e-24,3;CL:0002006,1.96e-24,3;CL:0002024,1.96e-24,3;CL:0000553,1.44e-12,6;CL:0000556,1.44e-12,6;CL:0000050,1.41e-08,9;CL:0002031,5.82e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.06e-21!23;UBERON:0000974!1.06e-21!23;UBERON:0004807!1.06e-21!23;UBERON:0005058!1.06e-21!23;UBERON:0003351!1.06e-21!23;UBERON:0009113!1.06e-21!23;UBERON:0003295!1.06e-21!23;UBERON:0009722!1.06e-21!23;UBERON:0005562!1.06e-21!23;UBERON:0007690!1.06e-21!23;UBERON:0006562!1.15e-20!24;UBERON:0003408!1.15e-20!24;UBERON:0001557!1.15e-20!24;UBERON:0001042!1.15e-20!24;UBERON:0008814!1.15e-20!24;UBERON:0009145!1.15e-20!24;UBERON:0004177!3.57e-19!29;UBERON:0000072!5.03e-18!27;UBERON:0002193!1.09e-17!48;UBERON:0002390!4.82e-17!45;UBERON:0003061!4.82e-17!45;UBERON:0000063!3.38e-13!35;UBERON:0000065!1.81e-12!41;UBERON:0003081!3.12e-12!88;UBERON:0002405!4.05e-12!70;UBERON:0001004!4.29e-12!42;UBERON:0005057!6.83e-11!51;UBERON:0002368!1.23e-08!60;UBERON:0003929!1.71e-08!55;UBERON:0002530!1.04e-07!65;UBERON:0000490!1.36e-07!66;UBERON:0005911!4.38e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.74e-14,45;UBERON:0003061,6.74e-14,45;UBERON:0002193,5.43e-13,48;UBERON:0002405,5.43e-13,48;UBERON:0002370,1.57e-12,23;UBERON:0000974,1.57e-12,23;UBERON:0004807,1.57e-12,23;UBERON:0005058,1.57e-12,23;UBERON:0003351,1.57e-12,23;UBERON:0009113,1.57e-12,23;UBERON:0003295,1.57e-12,23;UBERON:0009722,1.57e-12,23;UBERON:0005562,1.57e-12,23;UBERON:0007690,1.57e-12,23;UBERON:0006562,5.32e-12,24;UBERON:0003408,5.32e-12,24;UBERON:0001557,5.32e-12,24;UBERON:0001042,5.32e-12,24;UBERON:0008814,5.32e-12,24;UBERON:0009145,5.32e-12,24;UBERON:0000072,1.20e-10,27;UBERON:0004177,6.71e-10,29;UBERON:0005057,6.71e-10,29;UBERON:0000077,3.65e-08,35;UBERON:0007811,6.25e-08,36;UBERON:0000065,6.23e-07,41;UBERON:0003081,7.52e-07,87;UBERON:0001004,9.25e-07,42 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,1.61980213911861,2.79824751251259,0,0,0,0,1.39007331681239,1.56719873483361,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0.173485326766136,0,0,0,0,0,0.741584903203122,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683471138605126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,2.02725215290164,7.39518891586756,4.28738715826724,2.50637373934474,1.98681354781265,0.721172697119813,0.590758108698309,1.00966449948148,0.304827226619999,0.302478555410522,0.38983152295901,0.577271049841977,0.935015217452552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@Tcf25 | |||
}} |
Latest revision as of 16:52, 1 October 2015
Short description: | p5@Tcf25 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Tcf25_5end |
Coexpression cluster: | MCL_coexpression_mm9:129 |
Association with transcript: | -37bp_to_uc009nvr.1_5end |
EntrezGene: | Tcf25 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 1.96e-24 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.96e-24 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.96e-24 | 3 |
megakaryocyte progenitor cell | 1.44e-12 | 6 |
megakaryocyte | 1.44e-12 | 6 |
megakaryocyte-erythroid progenitor cell | 1.41e-08 | 9 |
hematopoietic lineage restricted progenitor cell | 5.82e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.74e-14 | 45 |
blood island | 6.74e-14 | 45 |
hemolymphoid system | 5.43e-13 | 48 |
immune system | 5.43e-13 | 48 |
thymus | 1.57e-12 | 23 |
neck | 1.57e-12 | 23 |
respiratory system epithelium | 1.57e-12 | 23 |
hemolymphoid system gland | 1.57e-12 | 23 |
pharyngeal epithelium | 1.57e-12 | 23 |
thymic region | 1.57e-12 | 23 |
pharyngeal gland | 1.57e-12 | 23 |
entire pharyngeal arch endoderm | 1.57e-12 | 23 |
thymus primordium | 1.57e-12 | 23 |
early pharyngeal endoderm | 1.57e-12 | 23 |
pharynx | 5.32e-12 | 24 |
gland of gut | 5.32e-12 | 24 |
upper respiratory tract | 5.32e-12 | 24 |
chordate pharynx | 5.32e-12 | 24 |
pharyngeal arch system | 5.32e-12 | 24 |
pharyngeal region of foregut | 5.32e-12 | 24 |
segment of respiratory tract | 1.20e-10 | 27 |
hemopoietic organ | 6.71e-10 | 29 |
immune organ | 6.71e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 3.65e-08 | 35 |
craniocervical region | 6.25e-08 | 36 |
respiratory tract | 6.23e-07 | 41 |
lateral plate mesoderm | 7.52e-07 | 87 |
respiratory system | 9.25e-07 | 42 |