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FFCP PHASE1:Mm9::chr8:86521512..86521553,+: Difference between revisions

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{{FFCP|EntrezGene=666704|HGNC=|MCL_coexpression_id=108|UniProt=D3YXK1|association_with_transcript=-17bp_to_ENSMUST00000095228,NM_001081415,uc009mln.1_5end|description=CAGE_peak_3_at_Samd1_5end|id=chr8:86521512..86521553,+|ontology_enrichment_celltype=CL:0000221!8.85e-11!44;CL:0000133!8.85e-11!44;CL:0002319!1.66e-10!43;CL:0000540!2.07e-08!33;CL:0000047!2.07e-08!33;CL:0000031!2.07e-08!33;CL:0000404!2.07e-08!33;CL:0000055!2.38e-07!50;CL:0000117!9.70e-07!23;CL:0000337!9.70e-07!23|ontology_enrichment_celltype_v019_2=CL:0000221,6.86e-11,44;CL:0000133,6.86e-11,44;CL:0002319,1.31e-10,43;CL:0000540,1.88e-08,33;CL:0000047,1.88e-08,33;CL:0000031,1.88e-08,33;CL:0000404,1.88e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.06e-11!73;UBERON:0005743!1.06e-11!73;UBERON:0000073!1.83e-11!75;UBERON:0001016!1.83e-11!75;UBERON:0004121!4.42e-09!102;UBERON:0000924!4.42e-09!102;UBERON:0006601!4.42e-09!102;UBERON:0002346!7.97e-09!71;UBERON:0003075!7.97e-09!71;UBERON:0007284!7.97e-09!71;UBERON:0002020!3.06e-08!34;UBERON:0001049!4.57e-08!52;UBERON:0005068!4.57e-08!52;UBERON:0006241!4.57e-08!52;UBERON:0007135!4.57e-08!52;UBERON:0002780!1.46e-07!39;UBERON:0001890!1.46e-07!39;UBERON:0006240!1.46e-07!39;UBERON:0003056!2.78e-07!49;UBERON:0003080!4.08e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.43e-11,73;UBERON:0001016,4.13e-11,75;UBERON:0004121,6.31e-09,95;UBERON:0000924,6.31e-09,95;UBERON:0006601,6.31e-09,95;UBERON:0002346,1.12e-08,64;UBERON:0003075,1.12e-08,64;UBERON:0007284,1.12e-08,64;UBERON:0002020,2.22e-08,34;UBERON:0001049,9.99e-08,52;UBERON:0005068,9.99e-08,52;UBERON:0006241,9.99e-08,52;UBERON:0007135,9.99e-08,52;UBERON:0002780,1.10e-07,39;UBERON:0001890,1.10e-07,39;UBERON:0006240,1.10e-07,39;UBERON:0003056,2.25e-07,49;UBERON:0010371,2.39e-07,73;UBERON:0010314,2.95e-07,92;UBERON:0003080,4.26e-07,40;UBERON:0000073,6.28e-07,54|phase1_expression=5.2849119544582,0,0,0,0,0.671517087647559,0.467225281191051,0.516493293766305,2.25261955442667,0.468129052643987,0.34243593645101,0.638177271962691,0.513602189793617,0.34968160967599,0,0.607425802169478,0,0.157731082679119,0.411343300817216,1.27316895539409,0.935476191661768,0.794327609607082,2.61199789138935,0.799962113967033,0.22940928106717,1.14846392823004,0,0.215471232685889,0.570070258369122,0.504060259519861,0.221730510655305,1.90509202037889,4.30545351309199,0,0,1.49611180822643,0.408338712524738,0.418531630736908,0,0,0,0.683045484958446,0,0.629484089877886,0.506884656097573,0.734187008646726,10.1710874765245,9.15705656797875,3.51497892375155,2.52758868796568,2.79972843250725,7.18762821824858,1.17447824240415,2.17608642603403,0,1.02903774414379,2.57880095944881,0,7.08107613008592,8.99284664762456,11.4089652631112,6.43804610931351,8.00365316500025,4.04954872776629,2.96659908770092,4.9733608046227,6.89080254192331,13.831858991576,11.0947885170071,13.3655878948374,12.4091727197315,11.1403883917483,3.53389665522582,9.79926393719632,12.0765293482978,14.7075005857603,1.10115880999389,1.40456071893706,0.614426133024974,6.59431438650969,6.77008562657831,9.37644067002168,1.67509799400829,0.56276261003168,2.44477196442896,7.07108605136802,5.12538050876771,8.76077395378913,2.12033341332915,1.81371744256285,0.289864488701678,0.860423876981386,0,0,0,0,0.421333260395256,1.53387290320252,1.55871602761721,1.41335829804136,4.50698943285378,1.28326477414318,2.54805239706646,0,0.649473123033642,1.52015919285059,0.505524445014783,0.45673551887624,1.03575153458869,1.03909497345377,7.98032503124225,2.43572382649713,3.68984795609694,2.26083960828934,1.99900802130698,1.50799909595611,1.73036477414062,0.578397427679647,0,2.91180329905337,1.10420759230197,0,0,0.585561594023094,0.83778682725382,0,1.1981512450592,1.19980546198682,0.762421362438388,0.748953197024114,1.37250180845588,13.1937069718508,2.08589184230732,0.511430914660661,1.24672826735736,2.75810147215188,4.78645010096487,0.622034853050465,0.505445516867349,0,5.46505860443356,7.35686734187113,5.04173963454978,4.21973489940002,3.26575195926374,2.94661556655154,3.09215691047105,0.517406741478031,7.11374376678379,6.99692496620931,10.5570674498369,11.3981780862339,5.00485048606076,5.2237824978325,4.32142486456681,7.96137067273973,0.702213187313235,0.51469581422943,0,3.72826390563903,3.04883877975425,3.78130329068131,5.91861838963026,2.55793501271625,3.70241070929708,2.09280550275367,3.21928081679543,0.934122738937356,2.30383789878873,0.820837320395476,1.21603214318784,1.75439984910399,0.439100230582101,1.20785776884335,2.10289948564127,7.82075054082562,0,0.528901133327089,8.10495352033889,9.98617688999886,3.99489130098489,2.01683524623343,2.66853652613844,2.28270751335071,0.474529061544512,2.14108641141214,1.00534083520108,1.1937388322469,1.36474860983384,2.69645822596266,0.216138049874694,0.398282546508734,9.67306294860717,3.42745537829186,2.25415471346161,3.86937522906097,3.68509725618489,3.43665517462561,1.96033265085198,1.18088118383682,0.627994911365499,0.370191491765402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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=666704
|HGNC=
|MCL_coexpression_id=108
|TSSclassifier=NA
|UniProt=D3YXK1
|association_with_transcript=-17bp_to_ENSMUST00000095228,NM_001081415,uc009mln.1_5end
|cluster_id=chr8:86521512..86521553,+
|description=CAGE_peak_3_at_Samd1_5end
|id=chr8:86521512..86521553,+
|ontology_enrichment_celltype=CL:0000221!8.85e-11!44;CL:0000133!8.85e-11!44;CL:0002319!1.66e-10!43;CL:0000540!2.07e-08!33;CL:0000047!2.07e-08!33;CL:0000031!2.07e-08!33;CL:0000404!2.07e-08!33;CL:0000055!2.38e-07!50;CL:0000117!9.70e-07!23;CL:0000337!9.70e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000221,6.86e-11,44;CL:0000133,6.86e-11,44;CL:0002319,1.31e-10,43;CL:0000540,1.88e-08,33;CL:0000047,1.88e-08,33;CL:0000031,1.88e-08,33;CL:0000404,1.88e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.06e-11!73;UBERON:0005743!1.06e-11!73;UBERON:0000073!1.83e-11!75;UBERON:0001016!1.83e-11!75;UBERON:0004121!4.42e-09!102;UBERON:0000924!4.42e-09!102;UBERON:0006601!4.42e-09!102;UBERON:0002346!7.97e-09!71;UBERON:0003075!7.97e-09!71;UBERON:0007284!7.97e-09!71;UBERON:0002020!3.06e-08!34;UBERON:0001049!4.57e-08!52;UBERON:0005068!4.57e-08!52;UBERON:0006241!4.57e-08!52;UBERON:0007135!4.57e-08!52;UBERON:0002780!1.46e-07!39;UBERON:0001890!1.46e-07!39;UBERON:0006240!1.46e-07!39;UBERON:0003056!2.78e-07!49;UBERON:0003080!4.08e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.43e-11,73;UBERON:0001016,4.13e-11,75;UBERON:0004121,6.31e-09,95;UBERON:0000924,6.31e-09,95;UBERON:0006601,6.31e-09,95;UBERON:0002346,1.12e-08,64;UBERON:0003075,1.12e-08,64;UBERON:0007284,1.12e-08,64;UBERON:0002020,2.22e-08,34;UBERON:0001049,9.99e-08,52;UBERON:0005068,9.99e-08,52;UBERON:0006241,9.99e-08,52;UBERON:0007135,9.99e-08,52;UBERON:0002780,1.10e-07,39;UBERON:0001890,1.10e-07,39;UBERON:0006240,1.10e-07,39;UBERON:0003056,2.25e-07,49;UBERON:0010371,2.39e-07,73;UBERON:0010314,2.95e-07,92;UBERON:0003080,4.26e-07,40;UBERON:0000073,6.28e-07,54
|phase1_expression=5.2849119544582,0,0,0,0,0.671517087647559,0.467225281191051,0.516493293766305,2.25261955442667,0.468129052643987,0.34243593645101,0.638177271962691,0.513602189793617,0.34968160967599,0,0.607425802169478,0,0.157731082679119,0.411343300817216,1.27316895539409,0.935476191661768,0.794327609607082,2.61199789138935,0.799962113967033,0.22940928106717,1.14846392823004,0,0.215471232685889,0.570070258369122,0.504060259519861,0.221730510655305,1.90509202037889,4.30545351309199,0,0,1.49611180822643,0.408338712524738,0.418531630736908,0,0,0,0.683045484958446,0,0.629484089877886,0.506884656097573,0.734187008646726,10.1710874765245,9.15705656797875,3.51497892375155,2.52758868796568,2.79972843250725,7.18762821824858,1.17447824240415,2.17608642603403,0,1.02903774414379,2.57880095944881,0,7.08107613008592,8.99284664762456,11.4089652631112,6.43804610931351,8.00365316500025,4.04954872776629,2.96659908770092,4.9733608046227,6.89080254192331,13.831858991576,11.0947885170071,13.3655878948374,12.4091727197315,11.1403883917483,3.53389665522582,9.79926393719632,12.0765293482978,14.7075005857603,1.10115880999389,1.40456071893706,0.614426133024974,6.59431438650969,6.77008562657831,9.37644067002168,1.67509799400829,0.56276261003168,2.44477196442896,7.07108605136802,5.12538050876771,8.76077395378913,2.12033341332915,1.81371744256285,0.289864488701678,0.860423876981386,0,0,0,0,0.421333260395256,1.53387290320252,1.55871602761721,1.41335829804136,4.50698943285378,1.28326477414318,2.54805239706646,0,0.649473123033642,1.52015919285059,0.505524445014783,0.45673551887624,1.03575153458869,1.03909497345377,7.98032503124225,2.43572382649713,3.68984795609694,2.26083960828934,1.99900802130698,1.50799909595611,1.73036477414062,0.578397427679647,0,2.91180329905337,1.10420759230197,0,0,0.585561594023094,0.83778682725382,0,1.1981512450592,1.19980546198682,0.762421362438388,0.748953197024114,1.37250180845588,13.1937069718508,2.08589184230732,0.511430914660661,1.24672826735736,2.75810147215188,4.78645010096487,0.622034853050465,0.505445516867349,0,5.46505860443356,7.35686734187113,5.04173963454978,4.21973489940002,3.26575195926374,2.94661556655154,3.09215691047105,0.517406741478031,7.11374376678379,6.99692496620931,10.5570674498369,11.3981780862339,5.00485048606076,5.2237824978325,4.32142486456681,7.96137067273973,0.702213187313235,0.51469581422943,0,3.72826390563903,3.04883877975425,3.78130329068131,5.91861838963026,2.55793501271625,3.70241070929708,2.09280550275367,3.21928081679543,0.934122738937356,2.30383789878873,0.820837320395476,1.21603214318784,1.75439984910399,0.439100230582101,1.20785776884335,2.10289948564127,7.82075054082562,0,0.528901133327089,8.10495352033889,9.98617688999886,3.99489130098489,2.01683524623343,2.66853652613844,2.28270751335071,0.474529061544512,2.14108641141214,1.00534083520108,1.1937388322469,1.36474860983384,2.69645822596266,0.216138049874694,0.398282546508734,9.67306294860717,3.42745537829186,2.25415471346161,3.86937522906097,3.68509725618489,3.43665517462561,1.96033265085198,1.18088118383682,0.627994911365499,0.370191491765402,0,4.00428253718626,1.96558995113203,1.34917267430912,0.608580364165509,0.72353147925725,0.50925170356284,0.575392274901621,0.324270453550071,0.823684239564244,1.43768206527355,0,0.936113019343682,0.505157755894224,0.179397413521912,0.964887042726734,0.923765950833023,9.09558776498327,7.33342393989116,6.11082308790677,4.92849521405854,1.67506257441816,1.6663054862021,3.12213836572478,0.945810864637146,2.6575762757853,1.2756381492599,0.655453258862952,1.38147985492716,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0.80275294993896,1.52375192569864,2.95082901678016,1.51482556322624,4.73262329124385,3.90438744296638,3.44677436372478,5.4962823529087,3.56477878531831,4.24614796183249,3.64329631507405,4.09158201075837,2.37172666767914,2.57057053137446,1.41940085208269,11.5742642383716,6.67836533349662,1.97964147567043,0,4.85561272309963,3.62788268357701,0.943025398779491,3.83892460745005,4.30409207121498,2.32585463851399,1.45413491791002,2.13898427030833,0,1.05418608574999,0,1.36175842301515,6.84232157318979,6.72665155670323,6.85878512101095,3.54680467284547,7.31312152168489,4.44282355625727,2.13125464380219,1.64270195644597,3.38931313382112,0.882113592219848,0,1.77610869365496,1.86970067277283,1.67121281604391,1.64140899745061,0.874442509889552,1.48340241608408,0.683483523191411,8.2554747185289,2.22233432843654,0.941842285023455,0.410082683163076,0.686334519619568,1.18984900995699,1.25956307091292,1.79659965945751,0.954670618015114,10.1227517945963,5.69294507955176,5.07625101862466,3.55450103224597,2.62035076495413,2.02296519577231,0.909188012978695,0.523511883968059,0.388844919875379,0,1.12738587736838,5.53211220362722,7.2801735801123,5.63908446197738,8.26622870257479,4.05494701177868,4.10750335260139,4.29674469985035,4.40409246587986,0.966336483304024,0.576060012515731,1.89606672376907,9.93353554921804,4.31386020092274,2.20865399062252,5.37080087002444,3.57626438606277,3.12508168751919,3.10148007066612,2.42319479875554,1.98137697303,2.92395936896837,2.63136277997332,2.21287235772758,1.75315353272353,0.680191150845634,7.32553646134413,7.62567781180543,3.52557694364565,1.15913756419314,0.187682475451182,1.09890974560359,0.428736758158132,1.50471631210609,5.64751842617067,4.60325236507177,6.30185064783336,4.64003592327956,5.48066015816514,1.5107877947794,3.37511250115903,4.5032120322422,2.26571204492102,2.07104124700728,7.47268902606072,5.58634822761443,5.80494259564056,5.10524105843418,6.49800804146745,5.51530525350042,4.22268782823069,3.29656091582231,1.92551525755089,3.28506375292937,1.2673964994512,3.58390048633545,3.09016974650612,3.84150914429216,3.96304735793732,2.85776214769844,4.86714168968393,4.43691207066522,3.29668720642645,3.82717192349433,4.4573002810104,2.30718548007139,3.81497903915713,3.0522747492789,3.95259397744389,3.21535509988371,3.29270351170991,2.36762740294059,3.39510284614654,3.36685362994643,4.50813068871862,3.84167481264697,4.09231043169689,2.63392630016142,3.2794123866794,6.74488560432454,3.27504251823572,1.71896843238639,2.48674831689496,1.10295709559758,1.62307484934295
|short_description=p3@Samd1
}}

Latest revision as of 21:00, 25 September 2015

Short description:p3@Samd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Samd1_5end
Coexpression cluster:MCL_coexpression_mm9:108
Association with transcript: -17bp_to_ENSMUST00000095228, NM_001081415, uc009mln.1_5end
EntrezGene:Samd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Samd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.16
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.08
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C711.41
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C86.89
Mouse Microglia, donor2.CNhs12634.11736-123E813.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.09
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.37
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D912.41
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.08
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.59
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.77
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.76
Mouse Schwann, donor1.CNhs12507.11728-123D92.12
Mouse Schwann, donor2.CNhs12573.11746-123F91.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.51
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C57.98
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.91
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F113.19
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.79
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C65.47
eyeball, embryo E14.CNhs10521.399-16E27.36
eyeball, embryo E15.CNhs10593.426-16C95.04
eyeball, embryo E17.CNhs11023.1261-18D44.22
eyeball, neonate N00.CNhs11207.633-15C63.27
eyeball, neonate N01.CNhs11140.1532-43E72.95
eyeball, neonate N02.CNhs11205.1551-44G83.09
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E27.11
forelimb, embryo E12.CNhs10600.359-14H27.00
forelimb, embryo E13.CNhs10589.384-1E210.56
forelimb, embryo E14.CNhs10577.413-26A811.40
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C45.22
forelimb, embryo E18.CNhs11008.1520-43B54.32
gonad, embryo E13.CNhs11044.1564-45I67.96
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I93.78
heart, embryo E14.CNhs10597.403-26D45.92
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C63.70
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G17.82
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I58.10
intestine, embryo E13.CNhs11010.381-16D59.99
intestine, embryo E15.CNhs10602.976-16D83.99
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I99.67
kidney, embryo E15.CNhs10997.434-16F83.43
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.87
kidney, embryo E18.CNhs11001.1288-20C73.69
kidney, neonate N00.CNhs11214.646-21G73.44
kidney, neonate N10.CNhs11206.758-6D51.96
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F84.00
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G29.10
lung, embryo E14.CNhs10604.404-26F87.33
lung, embryo E15.CNhs11020.432-17C56.11
lung, embryo E16.CNhs10998.458-17B64.93
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C63.12
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H711.57
ovary, neonate N00.CNhs11217.1299-22I46.68
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.86
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E66.84
pituitary gland, embryo E13.CNhs11009.370-44C76.73
pituitary gland, embryo E14.CNhs11037.398-44A56.86
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F67.31
pituitary gland, embryo E17.CNhs11039.1265-44F54.44
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G33.39
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H31.87
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C18.26
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.80
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E310.12
stomach, embryo E15.CNhs10603.1252-16G85.69
stomach, embryo E16.CNhs11022.459-17D45.08
stomach, embryo E17.CNhs11006.1035-18D53.55
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B82.02
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F55.53
testis, embryo E15.CNhs11034.443-27C57.28
testis, embryo E16.CNhs11033.470-26G55.64
testis, embryo E17.CNhs11029.486-18I58.27
testis, embryo E18.CNhs11027.503-18G54.05
testis, neonate N00.CNhs11189.1300-22B74.11
testis, neonate N07.CNhs11222.726-26I44.30
testis, neonate N10.CNhs11204.763-44D94.40
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I49.93
thymus, embryo E15.CNhs11005.430-45I24.31
thymus, embryo E16.CNhs11002.456-26C52.21
thymus, embryo E17.CNhs10581.478-18C15.37
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F83.13
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C42.42
thymus, neonate N07.CNhs11211.713-19D31.98
thymus, neonate N10.CNhs11194.748-24E42.92
thymus, neonate N20.CNhs11186.820-7A22.63
thymus, neonate N25.CNhs11125.1362-25G72.21
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.53
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.64
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I87.47
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H25.80
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B16.50
whole body, embryo E16.CNhs10514.453-14F25.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.22
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I56.74
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell6.86e-1144
neurectodermal cell6.86e-1144
neural cell1.31e-1043
neuron1.88e-0833
neuronal stem cell1.88e-0833
neuroblast1.88e-0833
electrically signaling cell1.88e-0833
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